Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944778
Identifier: 119944778
GI number: 119944778
Start: 1284060
End: 1285136
Strand: Direct
Name: 119944778
Synonym: Ping_1020
Alternate gene names: NA
Gene position: 1284060-1285136 (Clockwise)
Preceding gene: 119944776
Following gene: 119944784
Centisome position: 28.16
GC content: 40.76
Gene sequence:
>1077_bases TTGTCATTTAATCATTCCCCTGAAATAACATCCGTTAACAATGCTGCTGCATCTATTCCTCATTCCCGTCTTAAAATAGC GACTTTTAATCTGTTTAATTATCTTGAACCGCCTTTTGCCTATTATGATTTTGAACGGATTTACAGCGCCGAACAATGGG CTAAAAAACAAAAGTGGATAACGGATTATGTTAATGAGTTTCAACCTGATGTGATTGGATTTCAGGAGGTCTTCAGTCCT GAAGCACTGGCTGAATTATTAAGAGAGCAAGGTTATGAATTTTTTCAGGTGGTTGATCAGCCAGAAGTTATTGATGATTT TATCTGTCGTAGCCCGGTGGTCGCTATTGCCTCAAAATATCCGATTGTTGATATTGAGGCGGTGCAGGCAGATACAACCC TAGCGCTTGCAATGGGGCTGAAAGAGGATTTTTCCTTTAGCCGGCAGGTATTACGCGCAACCATTAATTTACCCCATATT GGCGATTGCGATTGTTATGTAGTGCATTTTAAATCGAAACGTCCGATGCTTGAGCATGAAGAGAGTAAAAGCTTGTCGGG TGAAAAAAACATTATCGAAAAACTAAAGGCACAAGTCGCCGGTGGTTGGGGCTCCACTATTCAGCGCGGCAGCGAAGCCG CACTGTTATTGGTTAATATGATAGCGCGCCGCGAAGAAACCGGATTACCCATGATTTTGATGGGGGATTTTAATAATATT CTGGCAGACGGGGTATTAGACCATCTGGTCACTGATACGCTGCGTTTTGTGTCAAAATTGGACAGTGATGCTTATCTTGA AAAATACTGCTTAAAAGATTCATGGGATTTATTTCAGGGGACAGAAAATAATACTGAGCATATTTTGCGTAAACCGACAC ACTATTTTGGTGCATCGAGTTCAGTCTTAGATTATATTTTATTATCCTGTGAATTTGATGCTAACTATCATTCAAGCTTA TTTGAGGTCAGTGAATATAATACCTACGACAGGCATTTGATTAATCCTATTTTTGATCGTGACGGCGAAAGTACCGACCA CGGTGTTGTTCTGGTGACTCTGCAGTTACGCTCTTAA
Upstream 100 bases:
>100_bases CAAATACTGCCCATTGAGAAAGGTAAAAATAATCAAGCTTCTCCACAAGCCGAGCTGATTTCCGTTATACTGGCAGCCTA AACACTACAGAGAAAATAAT
Downstream 100 bases:
>100_bases AACAGTCGTGATGATTGAATAATAAATCGGATTATTTTATTGATGCGTTTGGTCTTATGTTAGCGGTAGGGTGCATTCTA TGCACCGCAAACAGTGTTAA
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSFNHSPEITSVNNAAASIPHSRLKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSP EALAELLREQGYEFFQVVDQPEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMGLKEDFSFSRQVLRATINLPHI GDCDCYVVHFKSKRPMLEHEESKSLSGEKNIIEKLKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNI LADGVLDHLVTDTLRFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDANYHSSL FEVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQLRS
Sequences:
>Translated_358_residues MSFNHSPEITSVNNAAASIPHSRLKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSP EALAELLREQGYEFFQVVDQPEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMGLKEDFSFSRQVLRATINLPHI GDCDCYVVHFKSKRPMLEHEESKSLSGEKNIIEKLKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNI LADGVLDHLVTDTLRFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDANYHSSL FEVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQLRS >Mature_357_residues SFNHSPEITSVNNAAASIPHSRLKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSPE ALAELLREQGYEFFQVVDQPEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMGLKEDFSFSRQVLRATINLPHIG DCDCYVVHFKSKRPMLEHEESKSLSGEKNIIEKLKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNIL ADGVLDHLVTDTLRFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDANYHSSLF EVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40738; Mature: 40607
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNHSPEITSVNNAAASIPHSRLKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWI CCCCCCCCCCCCCCHHHHCCCHHEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TDYVNEFQPDVIGFQEVFSPEALAELLREQGYEFFQVVDQPEVIDDFICRSPVVAIASKY HHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCHHHHHCCC PIVDIEAVQADTTLALAMGLKEDFSFSRQVLRATINLPHIGDCDCYVVHFKSKRPMLEHE CEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC ESKSLSGEKNIIEKLKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNI HHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHH LADGVLDHLVTDTLRFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHCCCCH SVLDYILLSCEFDANYHSSLFEVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQLRS HHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHCHHHCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SFNHSPEITSVNNAAASIPHSRLKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWI CCCCCCCCCCCCCHHHHCCCHHEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TDYVNEFQPDVIGFQEVFSPEALAELLREQGYEFFQVVDQPEVIDDFICRSPVVAIASKY HHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCHHHHHCCC PIVDIEAVQADTTLALAMGLKEDFSFSRQVLRATINLPHIGDCDCYVVHFKSKRPMLEHE CEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC ESKSLSGEKNIIEKLKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNI HHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHH LADGVLDHLVTDTLRFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHCCCCH SVLDYILLSCEFDANYHSSLFEVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQLRS HHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHCHHHCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA