Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is nasA [H]
Identifier: 119944784
GI number: 119944784
Start: 1293173
End: 1295857
Strand: Direct
Name: nasA [H]
Synonym: Ping_1026
Alternate gene names: 119944784
Gene position: 1293173-1295857 (Clockwise)
Preceding gene: 119944778
Following gene: 119944785
Centisome position: 28.36
GC content: 45.88
Gene sequence:
>2685_bases ATGACAGCAGAAAAAAGCCTATGGACAAAAACCACTTGTGCATATTGTGGCGTTGGTTGCGGCGTGGAAGCAAAACCCAA TAAACTTGGTTTATTAGATATTAGAGGCGATCAGGATCACCCTGCAAATTATGGGCGCTTGTGCTCTAAAGGGTTGGCAC TTGGTGAGACCGTTGTCCATGACGGGCGATTATTAACCCCGGAAATTAATGGGGCTCCGTCAAATTGGGAGGATGCTCTA ACGCTTGTGGCCGATAAATTTTCCGACACCATAAAGCAATACGGACCTGATTCCGTTGCATTTTATGTATCAGGGCAGCT ATTGACTGAAGATTATTATGCGGCTAATAAGCTGATGAAAGGCTTTATCGGCAGCGGCAATATTGATACCAACTCGCGTC TGTGTATGTCTTCATCGGTCGCCGGGCACAAACGTGCCTTTGGCTCCGATACTGTCCCGATTTGTTATCAGGACCTTGAA AAAACCGATATGGTGGTCATTACCGGCTCCAATTTAGCCTGGTGTCATCCGGTTTTATTTCAGCGCTTAAAAGCGGCTAA AGCCTTACGTCCGGAACTTTTTATCGTGGTGATTGATCCGCGAAAAACCGCGACCTGTGAAATTGCAGATTGTCATTTGG CCATTCAGCCGGGCAGTGATGTTGCTCTGTTTAACGGTTTATTAGCTTATCTTGCCGAAAATAAAACTATAGACAGGGAT TATATCGACCAATATACCCAGGGGTTTGAAGCGAGTTTAGCCAGTGCTATTGACGAATGTCAGGATCGGCAAGCATTTTT AAAACGTCTGGGTATTGAGGAAAGTCAGCTGGAATTGTTTTATAAGCATTTTTCTCAGACCGAAAAAGTGCTTACCATTT ATTCCCAGGGAGTAAACCAATCATCTCAAGGGACTGATAAAGTAAACAGTATTTTGAACTGTTTTCTGGCAACGGGACGT ATTGGCAAAGAGGGCACGGGGCCCTTTTCGGTGACCGGTCAGCCCAATGCCATGGGCGGCAGAGAGGTGGGTGGTCTGGC GAACACTTTAGCTGCCCATATGGAATTTGGCAATGCGCAGGATCATCAAAGGATCAGTGAATTTTGGCAAACTGAGCAGT TAGCGAGCAAACCGGGCTTAAAAGCTGTTGAACTCTTTGATGCGATTGATGACGGTACTATTAAAGCCGTTTGGATAATG GCAACAAACCCGGTGGTAAGCTTGCCCGACAGTGATAAAATTAAGGCGGCATTAAAAAAATGCCCGTTAGTGGTGGTCTC GGACTGTATCAAAGAGACGGCGACCAGCACTTTTGCGGATGTGTTATTACCAGCCCAGGGCTGGAGTGAAAAGTCCGGAA CGATCACTAATTCAGAACGTCGAATCTCCCGTCAACGGCGAATTTTACCTACCCCGGGTTTAGGTAAACCGGACTGGTGG ATAATCAGTGAAGTGGCAAAAAAAATGGGCTTTGCAAAGGCTTTTGATTATGACCATGAAGGGCAGGTTTTTGATGAATA TGTAAAAATGACTGCATTGGGCAACCGCGACGGAAAATTACGTGCGCTAAATTTGATTGGTCTGGCGAATCTTGGTACTG ATGCCTACAATCACCTTACCCCGCAGCAATGGCCGGTGCCTGAATATCAAAAAGAGGTGGTTAATCAGCGCATGTTTGCC GATAATATTTTTTTTACGGAAAACAAAAAAGCGCGCTTAATCCCTATTTCACAAAAGCAGCCTCTTAGCCGCTGCACTGC AGATTACCCTTTTGTGCTTAATAATGGCCGCATTCGCGATCAGTGGCATACGATGAGCCGAACGGGGCTTTCCAGCCGCT TAAGCGCATATCAACCCGAACCTTTTGTTTCAATCAACCCTATTGACGCAGTAAAGCAACAACTTGAGCAAGGTCAGTTA GTGACTATCAGCAGTGCCAGCGGTTCGGTATTAGTGCGTTTAGCGGTTTCTGACGATATTGAACCCGGGCAGTTGTTTAT GCCAATACACTGGAGTCAGACAACAGCAAGTAAAGCTGCTATCTGCGCCCTAATCAAAGCCAATGTGGACCCAAATTCAG GGCAACCGGAATTTAAATTTACCCCAGTAAAGCTTGTTAAATGGGCATACAAAAGTGAAGCCTGGTTACTCAGCCGGACG GAGATGGACTTGTCTGATTTTGATTATTGGGTAAAACAAAAAGTGGCCGCGGGTTATCTGTACCGTCTTGCCGCAGAGTT TAATCCTCTTGAGATGACCATTAAACTGTCCAATTTAATGGACCATAATGGCGGCAAAACGCTGACTAATTCTCCTGGTG CTAAAAGCACAGCACCGATTTACCGTTACGCTAATATTACCGATCAAAAAATGCAGCAGGCCTATATTGTCGGCAAAAAT CTGCAGGAGCAAGATCTAGACTGGTTGCAAAACCTGCTGGATGAAACAATTGACAGCAGTATTGAACGCACACTTATTTC AGGGGAGGTAGAAGGCAAACTTGCCTGTGGGAAACTGATTTGCGCCTGCAAACAAGTCGGTGAAAAAACCATTAAAAATG CGATAGTCGAGCAGCAGCTGGGTAATCTGGAAGCCATCAGTGAGCATACCGGCGCCGGTACGGGATGCGGTTCCTGCTTA GGGGAAGTGGAGGCGATTTTAGTAGACTGCACGATGATTGTTTAA
Upstream 100 bases:
>100_bases ATAAGTTAAATAAGTTAAATAAGTTAAATAGATAAATTTGATAGATAAAACCTAATCAGGCATAAAACAGCCGATAAAAG CTGAAACCAAGAGAGGTCAC
Downstream 100 bases:
>100_bases AGTCCGTACAAGGCTTATTTAAAGACTACACCAGGCTTGTTTAAAGACTGCCTGATGCCGAGCCTAATTGTTAATTAAAT GATCGAGCCAACTTTTTTAA
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 894; Mature: 893
Protein sequence:
>894_residues MTAEKSLWTKTTCAYCGVGCGVEAKPNKLGLLDIRGDQDHPANYGRLCSKGLALGETVVHDGRLLTPEINGAPSNWEDAL TLVADKFSDTIKQYGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSGNIDTNSRLCMSSSVAGHKRAFGSDTVPICYQDLE KTDMVVITGSNLAWCHPVLFQRLKAAKALRPELFIVVIDPRKTATCEIADCHLAIQPGSDVALFNGLLAYLAENKTIDRD YIDQYTQGFEASLASAIDECQDRQAFLKRLGIEESQLELFYKHFSQTEKVLTIYSQGVNQSSQGTDKVNSILNCFLATGR IGKEGTGPFSVTGQPNAMGGREVGGLANTLAAHMEFGNAQDHQRISEFWQTEQLASKPGLKAVELFDAIDDGTIKAVWIM ATNPVVSLPDSDKIKAALKKCPLVVVSDCIKETATSTFADVLLPAQGWSEKSGTITNSERRISRQRRILPTPGLGKPDWW IISEVAKKMGFAKAFDYDHEGQVFDEYVKMTALGNRDGKLRALNLIGLANLGTDAYNHLTPQQWPVPEYQKEVVNQRMFA DNIFFTENKKARLIPISQKQPLSRCTADYPFVLNNGRIRDQWHTMSRTGLSSRLSAYQPEPFVSINPIDAVKQQLEQGQL VTISSASGSVLVRLAVSDDIEPGQLFMPIHWSQTTASKAAICALIKANVDPNSGQPEFKFTPVKLVKWAYKSEAWLLSRT EMDLSDFDYWVKQKVAAGYLYRLAAEFNPLEMTIKLSNLMDHNGGKTLTNSPGAKSTAPIYRYANITDQKMQQAYIVGKN LQEQDLDWLQNLLDETIDSSIERTLISGEVEGKLACGKLICACKQVGEKTIKNAIVEQQLGNLEAISEHTGAGTGCGSCL GEVEAILVDCTMIV
Sequences:
>Translated_894_residues MTAEKSLWTKTTCAYCGVGCGVEAKPNKLGLLDIRGDQDHPANYGRLCSKGLALGETVVHDGRLLTPEINGAPSNWEDAL TLVADKFSDTIKQYGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSGNIDTNSRLCMSSSVAGHKRAFGSDTVPICYQDLE KTDMVVITGSNLAWCHPVLFQRLKAAKALRPELFIVVIDPRKTATCEIADCHLAIQPGSDVALFNGLLAYLAENKTIDRD YIDQYTQGFEASLASAIDECQDRQAFLKRLGIEESQLELFYKHFSQTEKVLTIYSQGVNQSSQGTDKVNSILNCFLATGR IGKEGTGPFSVTGQPNAMGGREVGGLANTLAAHMEFGNAQDHQRISEFWQTEQLASKPGLKAVELFDAIDDGTIKAVWIM ATNPVVSLPDSDKIKAALKKCPLVVVSDCIKETATSTFADVLLPAQGWSEKSGTITNSERRISRQRRILPTPGLGKPDWW IISEVAKKMGFAKAFDYDHEGQVFDEYVKMTALGNRDGKLRALNLIGLANLGTDAYNHLTPQQWPVPEYQKEVVNQRMFA DNIFFTENKKARLIPISQKQPLSRCTADYPFVLNNGRIRDQWHTMSRTGLSSRLSAYQPEPFVSINPIDAVKQQLEQGQL VTISSASGSVLVRLAVSDDIEPGQLFMPIHWSQTTASKAAICALIKANVDPNSGQPEFKFTPVKLVKWAYKSEAWLLSRT EMDLSDFDYWVKQKVAAGYLYRLAAEFNPLEMTIKLSNLMDHNGGKTLTNSPGAKSTAPIYRYANITDQKMQQAYIVGKN LQEQDLDWLQNLLDETIDSSIERTLISGEVEGKLACGKLICACKQVGEKTIKNAIVEQQLGNLEAISEHTGAGTGCGSCL GEVEAILVDCTMIV >Mature_893_residues TAEKSLWTKTTCAYCGVGCGVEAKPNKLGLLDIRGDQDHPANYGRLCSKGLALGETVVHDGRLLTPEINGAPSNWEDALT LVADKFSDTIKQYGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSGNIDTNSRLCMSSSVAGHKRAFGSDTVPICYQDLEK TDMVVITGSNLAWCHPVLFQRLKAAKALRPELFIVVIDPRKTATCEIADCHLAIQPGSDVALFNGLLAYLAENKTIDRDY IDQYTQGFEASLASAIDECQDRQAFLKRLGIEESQLELFYKHFSQTEKVLTIYSQGVNQSSQGTDKVNSILNCFLATGRI GKEGTGPFSVTGQPNAMGGREVGGLANTLAAHMEFGNAQDHQRISEFWQTEQLASKPGLKAVELFDAIDDGTIKAVWIMA TNPVVSLPDSDKIKAALKKCPLVVVSDCIKETATSTFADVLLPAQGWSEKSGTITNSERRISRQRRILPTPGLGKPDWWI ISEVAKKMGFAKAFDYDHEGQVFDEYVKMTALGNRDGKLRALNLIGLANLGTDAYNHLTPQQWPVPEYQKEVVNQRMFAD NIFFTENKKARLIPISQKQPLSRCTADYPFVLNNGRIRDQWHTMSRTGLSSRLSAYQPEPFVSINPIDAVKQQLEQGQLV TISSASGSVLVRLAVSDDIEPGQLFMPIHWSQTTASKAAICALIKANVDPNSGQPEFKFTPVKLVKWAYKSEAWLLSRTE MDLSDFDYWVKQKVAAGYLYRLAAEFNPLEMTIKLSNLMDHNGGKTLTNSPGAKSTAPIYRYANITDQKMQQAYIVGKNL QEQDLDWLQNLLDETIDSSIERTLISGEVEGKLACGKLICACKQVGEKTIKNAIVEQQLGNLEAISEHTGAGTGCGSCLG EVEAILVDCTMIV
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI3868721, Length=710, Percent_Identity=27.3239436619718, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1788534, Length=530, Percent_Identity=30.7547169811321, Blast_Score=255, Evalue=7e-69, Organism=Escherichia coli, GI3868720, Length=618, Percent_Identity=24.5954692556634, Blast_Score=149, Evalue=1e-36, Organism=Escherichia coli, GI3868719, Length=618, Percent_Identity=24.2718446601942, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1787778, Length=461, Percent_Identity=24.7288503253796, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1787870, Length=751, Percent_Identity=22.5033288948069, Blast_Score=86, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 98310; Mature: 98179
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEKSLWTKTTCAYCGVGCGVEAKPNKLGLLDIRGDQDHPANYGRLCSKGLALGETVVH CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCHHCHHHHC DGRLLTPEINGAPSNWEDALTLVADKFSDTIKQYGPDSVAFYVSGQLLTEDYYAANKLMK CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEHHHHHHHHHHHH GFIGSGNIDTNSRLCMSSSVAGHKRAFGSDTVPICYQDLEKTDMVVITGSNLAWCHPVLF HHCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHH QRLKAAKALRPELFIVVIDPRKTATCEIADCHLAIQPGSDVALFNGLLAYLAENKTIDRD HHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHH YIDQYTQGFEASLASAIDECQDRQAFLKRLGIEESQLELFYKHFSQTEKVLTIYSQGVNQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SSQGTDKVNSILNCFLATGRIGKEGTGPFSVTGQPNAMGGREVGGLANTLAAHMEFGNAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCH DHQRISEFWQTEQLASKPGLKAVELFDAIDDGTIKAVWIMATNPVVSLPDSDKIKAALKK HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHHH CPLVVVSDCIKETATSTFADVLLPAQGWSEKSGTITNSERRISRQRRILPTPGLGKPDWW CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH IISEVAKKMGFAKAFDYDHEGQVFDEYVKMTALGNRDGKLRALNLIGLANLGTDAYNHLT HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCC PQQWPVPEYQKEVVNQRMFADNIFFTENKKARLIPISQKQPLSRCTADYPFVLNNGRIRD CCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHCCCCCEEECCCEECH QWHTMSRTGLSSRLSAYQPEPFVSINPIDAVKQQLEQGQLVTISSASGSVLVRLAVSDDI HHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCC EPGQLFMPIHWSQTTASKAAICALIKANVDPNSGQPEFKFTPVKLVKWAYKSEAWLLSRT CCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCCEEECHHHHHHHHHCCCCEEEEEC EMDLSDFDYWVKQKVAAGYLYRLAAEFNPLEMTIKLSNLMDHNGGKTLTNSPGAKSTAPI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCE YRYANITDQKMQQAYIVGKNLQEQDLDWLQNLLDETIDSSIERTLISGEVEGKLACGKLI EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH CACKQVGEKTIKNAIVEQQLGNLEAISEHTGAGTGCGSCLGEVEAILVDCTMIV HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECC >Mature Secondary Structure TAEKSLWTKTTCAYCGVGCGVEAKPNKLGLLDIRGDQDHPANYGRLCSKGLALGETVVH CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCHHCHHHHC DGRLLTPEINGAPSNWEDALTLVADKFSDTIKQYGPDSVAFYVSGQLLTEDYYAANKLMK CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEHHHHHHHHHHHH GFIGSGNIDTNSRLCMSSSVAGHKRAFGSDTVPICYQDLEKTDMVVITGSNLAWCHPVLF HHCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHH QRLKAAKALRPELFIVVIDPRKTATCEIADCHLAIQPGSDVALFNGLLAYLAENKTIDRD HHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHH YIDQYTQGFEASLASAIDECQDRQAFLKRLGIEESQLELFYKHFSQTEKVLTIYSQGVNQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SSQGTDKVNSILNCFLATGRIGKEGTGPFSVTGQPNAMGGREVGGLANTLAAHMEFGNAQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCH DHQRISEFWQTEQLASKPGLKAVELFDAIDDGTIKAVWIMATNPVVSLPDSDKIKAALKK HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHHH CPLVVVSDCIKETATSTFADVLLPAQGWSEKSGTITNSERRISRQRRILPTPGLGKPDWW CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH IISEVAKKMGFAKAFDYDHEGQVFDEYVKMTALGNRDGKLRALNLIGLANLGTDAYNHLT HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCC PQQWPVPEYQKEVVNQRMFADNIFFTENKKARLIPISQKQPLSRCTADYPFVLNNGRIRD CCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHCCCCCEEECCCEECH QWHTMSRTGLSSRLSAYQPEPFVSINPIDAVKQQLEQGQLVTISSASGSVLVRLAVSDDI HHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCC EPGQLFMPIHWSQTTASKAAICALIKANVDPNSGQPEFKFTPVKLVKWAYKSEAWLLSRT CCCEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCCEEECHHHHHHHHHCCCCEEEEEC EMDLSDFDYWVKQKVAAGYLYRLAAEFNPLEMTIKLSNLMDHNGGKTLTNSPGAKSTAPI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCE YRYANITDQKMQQAYIVGKNLQEQDLDWLQNLLDETIDSSIERTLISGEVEGKLACGKLI EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH CACKQVGEKTIKNAIVEQQLGNLEAISEHTGAGTGCGSCLGEVEAILVDCTMIV HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]