Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944768
Identifier: 119944768
GI number: 119944768
Start: 1271067
End: 1272329
Strand: Direct
Name: 119944768
Synonym: Ping_1010
Alternate gene names: NA
Gene position: 1271067-1272329 (Clockwise)
Preceding gene: 119944767
Following gene: 119944770
Centisome position: 27.88
GC content: 39.59
Gene sequence:
>1263_bases ATGACCACTCTGCTCATTCTTTTTACTTTCCCGGAAAACTTTATGCCTCATTCTGCACTCAATTCTTTTGATGATTTTTA CCGACTATTGGCCGAAAGCCTTGAAAATAACAGTCTCACAAAACTGTTATTAAGCAAATATAGAGGTAATGATAAGAGCT TACAACGTATTACTGTTCGCCCTGTTATATTACAAAACGCGCCTGTCCTGTCTTTTGTGTACCGTCATCAAACCAATGAT ATTACTAAAAATTATTCCTATGAGGAAGGCATCGCTGCTATTAAATTGTTATTAAACGATGATTTTAAAAGTGCCTACTT ATCGGCAGAATCCGTTGAAACGCAATTGGAAATCAGCAAAAAAGGTAAAATCAATATAACTACTCATAAAGTCAAGGAAG CGAGTGGTAAAGTTAAAGAAACGGCTAGCAGTCCGTTACAGCATGATCGTGAAAAAAAACGTTTTGTGGATATTAATCGC CCATTTTTAGAGAGGCTCGGGGTAACAGACAAGCAGCATCATCTTATTCCTGCCATGTCGCGGAAATGGAAACAGATCAA TAAATTTATCGAGGTATTTAGCCAGGCTTTAGACGTTTCACCACAAACAGATCAAAAGCCCATTAAGGTGGTTGATTTTG GCTCAGGTAAGGGATATTTAACCTTTGCCATTCATGACTATTTACGCCATAGCCTGCATAATAATGCCCAGGTAATCGGG GTTGAATTACGTCAGGGCTTAGCCGATTTATGTAATGAAACCGCATCTACACTGGATCATCAAGGGTTATCCTTTGTTTG CGGAGATGTCAAAACCCATGCGCCCAAACAAACCGATGTGATGATTGCGCTGCATGCCTGTGATATTGCTACAGATTATG CCATTCATTATGGTATCCGCGCCAATGCCAGCATTATTATGTGTTCCCCATGTTGTCATAAACAGATCCGCCCGCAAATG CACAGCCCTGAATTATTCAAACCTATGCTGCAGTATGGCGTGCACATGGGGCTACAAGCTGAAATGGTGACCGACTCATT ACGCGCGCTATTTTTAGAAGCACATGGTTATACAACTAAAGTGTTTGAATTTATCAGCCTTGAGCATACCAATAAAAATA AAATGATTTTGGCCGTTAAAAAGAGTCAACACAATGCCCGGGACAAAACCAAATTACTTAAACAGATTGCGGAAATCAAA GCATTTTACGGTATTAAAGAGCATTGCCTTGAAACCTTATTAGATGAAAGCAGCTGCAATTAA
Upstream 100 bases:
>100_bases TTTTTAAGATATAACCCTTTTTTAAGGCCTAAAAGCGCAGAGTGAAGTCCTTTTTCTCAAAAATCAATAAATTTATTATT AAGCGCAGATAACTGTTAGT
Downstream 100 bases:
>100_bases TACCCCACAGCTAATCACCCGCAGCGTTGTTATTTTGCTAACCAAGTGGTCAATAATGACCAGGCAATTGAAAACATAAT AACCGCAACAGTGATATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTTLLILFTFPENFMPHSALNSFDDFYRLLAESLENNSLTKLLLSKYRGNDKSLQRITVRPVILQNAPVLSFVYRHQTND ITKNYSYEEGIAAIKLLLNDDFKSAYLSAESVETQLEISKKGKINITTHKVKEASGKVKETASSPLQHDREKKRFVDINR PFLERLGVTDKQHHLIPAMSRKWKQINKFIEVFSQALDVSPQTDQKPIKVVDFGSGKGYLTFAIHDYLRHSLHNNAQVIG VELRQGLADLCNETASTLDHQGLSFVCGDVKTHAPKQTDVMIALHACDIATDYAIHYGIRANASIIMCSPCCHKQIRPQM HSPELFKPMLQYGVHMGLQAEMVTDSLRALFLEAHGYTTKVFEFISLEHTNKNKMILAVKKSQHNARDKTKLLKQIAEIK AFYGIKEHCLETLLDESSCN
Sequences:
>Translated_420_residues MTTLLILFTFPENFMPHSALNSFDDFYRLLAESLENNSLTKLLLSKYRGNDKSLQRITVRPVILQNAPVLSFVYRHQTND ITKNYSYEEGIAAIKLLLNDDFKSAYLSAESVETQLEISKKGKINITTHKVKEASGKVKETASSPLQHDREKKRFVDINR PFLERLGVTDKQHHLIPAMSRKWKQINKFIEVFSQALDVSPQTDQKPIKVVDFGSGKGYLTFAIHDYLRHSLHNNAQVIG VELRQGLADLCNETASTLDHQGLSFVCGDVKTHAPKQTDVMIALHACDIATDYAIHYGIRANASIIMCSPCCHKQIRPQM HSPELFKPMLQYGVHMGLQAEMVTDSLRALFLEAHGYTTKVFEFISLEHTNKNKMILAVKKSQHNARDKTKLLKQIAEIK AFYGIKEHCLETLLDESSCN >Mature_419_residues TTLLILFTFPENFMPHSALNSFDDFYRLLAESLENNSLTKLLLSKYRGNDKSLQRITVRPVILQNAPVLSFVYRHQTNDI TKNYSYEEGIAAIKLLLNDDFKSAYLSAESVETQLEISKKGKINITTHKVKEASGKVKETASSPLQHDREKKRFVDINRP FLERLGVTDKQHHLIPAMSRKWKQINKFIEVFSQALDVSPQTDQKPIKVVDFGSGKGYLTFAIHDYLRHSLHNNAQVIGV ELRQGLADLCNETASTLDHQGLSFVCGDVKTHAPKQTDVMIALHACDIATDYAIHYGIRANASIIMCSPCCHKQIRPQMH SPELFKPMLQYGVHMGLQAEMVTDSLRALFLEAHGYTTKVFEFISLEHTNKNKMILAVKKSQHNARDKTKLLKQIAEIKA FYGIKEHCLETLLDESSCN
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47676; Mature: 47545
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLILFTFPENFMPHSALNSFDDFYRLLAESLENNSLTKLLLSKYRGNDKSLQRITVR CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEC PVILQNAPVLSFVYRHQTNDITKNYSYEEGIAAIKLLLNDDFKSAYLSAESVETQLEISK EEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECC KGKINITTHKVKEASGKVKETASSPLQHDREKKRFVDINRPFLERLGVTDKQHHLIPAMS CCEEEEEHHHHHHHCCCHHHHHCCHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCHHHH RKWKQINKFIEVFSQALDVSPQTDQKPIKVVDFGSGKGYLTFAIHDYLRHSLHNNAQVIG HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEE VELRQGLADLCNETASTLDHQGLSFVCGDVKTHAPKQTDVMIALHACDIATDYAIHYGIR HHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCEEEEEEEHHHHHHHHEEECEE ANASIIMCSPCCHKQIRPQMHSPELFKPMLQYGVHMGLQAEMVTDSLRALFLEAHGYTTK CCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH VFEFISLEHTNKNKMILAVKKSQHNARDKTKLLKQIAEIKAFYGIKEHCLETLLDESSCN HHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCC >Mature Secondary Structure TTLLILFTFPENFMPHSALNSFDDFYRLLAESLENNSLTKLLLSKYRGNDKSLQRITVR CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEC PVILQNAPVLSFVYRHQTNDITKNYSYEEGIAAIKLLLNDDFKSAYLSAESVETQLEISK EEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECC KGKINITTHKVKEASGKVKETASSPLQHDREKKRFVDINRPFLERLGVTDKQHHLIPAMS CCEEEEEHHHHHHHCCCHHHHHCCHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCHHHH RKWKQINKFIEVFSQALDVSPQTDQKPIKVVDFGSGKGYLTFAIHDYLRHSLHNNAQVIG HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEE VELRQGLADLCNETASTLDHQGLSFVCGDVKTHAPKQTDVMIALHACDIATDYAIHYGIR HHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCEEEEEEEHHHHHHHHEEECEE ANASIIMCSPCCHKQIRPQMHSPELFKPMLQYGVHMGLQAEMVTDSLRALFLEAHGYTTK CCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH VFEFISLEHTNKNKMILAVKKSQHNARDKTKLLKQIAEIKAFYGIKEHCLETLLDESSCN HHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA