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The map label for this gene is yfgC [C]

Identifier: 119944687

GI number: 119944687

Start: 1160659

End: 1162104

Strand: Reverse

Name: yfgC [C]

Synonym: Ping_0926

Alternate gene names: 119944687

Gene position: 1162104-1160659 (Counterclockwise)

Preceding gene: 119944690

Following gene: 119944684

Centisome position: 25.49

GC content: 39.83

Gene sequence:

>1446_bases
GTGTTGAACAAATCTCTGCTTCTTGCACTTTATTTTTTCCTTTCTTTTTTTTCGGGTATTGCAAATTCAAGTAATGCTCT
TCCTGAGATTGGTACAGTGGGAGCCGCCACATTAAGCATTGAAAAAGAACAGGAATATGGTTGGGCTTTTAGATTAATGG
CAAATCAAAGTCTGCCAATCATCCATGATCCAGTTCTTAACCAGTATATCAATGAACTGGGTCAAAGCTTAGTTTCCCAT
GCAGAATCCGTGAGAATGCCATTTGATTTTTTCCTAATAGAGGATAATGAGATTAATGCGGCTGCATTTTTAGGCGGTAA
TGTAAAAATTCATACGGGGCTGTTCTTATATGCCAAGAATGAGAGTGAACTTGCGAGCGTCATTGCCCATGAAATAGCAC
ATATCACACAACGCCATCTTGCCCGTATGCTAGAACAACAGTCCTCCAATACTCCAACATCACTTGCTGCAATGGCGGGC
TCCATTTTACTGACTTTGGTATCTCCCGCCGCGGGCATGGCAGCTTTAACGACAACAATGGCAGTGTCGATACAGTCACA
AATTAATTATACCCGAACACATGAATATGAAGCCGATAGAATTGGTATAAAAACCTTAGCTGATGCCGGTTATGATCCGA
ATGGTATGGCACAATTTTTTGGCGAACTTGCTGAAAAATATAAGTATGCCAGCCTGCCTCCGAAAATGTTATCCACTCAC
CCGCTACCTGAAGCGCGTTTATCTGAAGCGCGTTTACGGGCGAGTCAATACAAGACAAAAAACATTACTAACAGCTTAGA
TTATCAGCTTAGTAAAGCACGCATTACCGTCCGCTTTAGTAGTATCAACCCCACATCAGCCATTAACTTATATGAAAGTC
AGCTCAAAAAGCAAAAATACGAGATTAAAGAAGCTGCTTTGTATGGTCTTGCTCTGGCCTATTTTGAAAATAAAGATTTT
TTACAAGCACAAGATATTATTAATGATTTATTAAAAGCACAATCCGGTAACCTGTTTTATATAGACTTGGCAACAGATAC
AGCACTCGCTTTAAATAAGGCGGATGAAATTATAGAAAAACTACAGCAGTTATATAAAAAGTCACCCGACAATCCCGTTT
ATACCATTAACTTAGTTGCTGCACTACAGGAGGATAAACGCTATGCGGACGCTGAAAAGATTCTTGAACTGTTTATCCGC
TCTCATCCTCGCCATATTTTGGCCCAGATAATCGCCGTTGATCTTTATAGATTGTTAAATAATCGCGCTAAGGAACACGC
AAGTAAAGCGCAATATTTAGCATTGCAGGGACGTTTTAAGGAAGCAATCCAAGAGGTCGGTAATGCACTTATTTATACGG
AAAACCCGTTAGACAAAGCAAGATACGCTGCAATGATGGCGGGTTATCAAAAAGATAATTTACGTTTGCAGGCATTAACA
AAATAA

Upstream 100 bases:

>100_bases
ACAGCAATTTTTACCTCAGTAACGATCTCAGACAATCATCACTTGCAATAAAGTGGTGATTGTTTATGCTTTTATTATAT
TTTTATGTTGAGTAGCTCTA

Downstream 100 bases:

>100_bases
TGCACCCAGATGACTTGTAGAGGCCAGAATCAGCCTCTACAAGTCATCTGGGTCGATAACCCAACATAAAAAATTGAGGT
TATGTTTTTTTTAGAGACCT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MLNKSLLLALYFFLSFFSGIANSSNALPEIGTVGAATLSIEKEQEYGWAFRLMANQSLPIIHDPVLNQYINELGQSLVSH
AESVRMPFDFFLIEDNEINAAAFLGGNVKIHTGLFLYAKNESELASVIAHEIAHITQRHLARMLEQQSSNTPTSLAAMAG
SILLTLVSPAAGMAALTTTMAVSIQSQINYTRTHEYEADRIGIKTLADAGYDPNGMAQFFGELAEKYKYASLPPKMLSTH
PLPEARLSEARLRASQYKTKNITNSLDYQLSKARITVRFSSINPTSAINLYESQLKKQKYEIKEAALYGLALAYFENKDF
LQAQDIINDLLKAQSGNLFYIDLATDTALALNKADEIIEKLQQLYKKSPDNPVYTINLVAALQEDKRYADAEKILELFIR
SHPRHILAQIIAVDLYRLLNNRAKEHASKAQYLALQGRFKEAIQEVGNALIYTENPLDKARYAAMMAGYQKDNLRLQALT
K

Sequences:

>Translated_481_residues
MLNKSLLLALYFFLSFFSGIANSSNALPEIGTVGAATLSIEKEQEYGWAFRLMANQSLPIIHDPVLNQYINELGQSLVSH
AESVRMPFDFFLIEDNEINAAAFLGGNVKIHTGLFLYAKNESELASVIAHEIAHITQRHLARMLEQQSSNTPTSLAAMAG
SILLTLVSPAAGMAALTTTMAVSIQSQINYTRTHEYEADRIGIKTLADAGYDPNGMAQFFGELAEKYKYASLPPKMLSTH
PLPEARLSEARLRASQYKTKNITNSLDYQLSKARITVRFSSINPTSAINLYESQLKKQKYEIKEAALYGLALAYFENKDF
LQAQDIINDLLKAQSGNLFYIDLATDTALALNKADEIIEKLQQLYKKSPDNPVYTINLVAALQEDKRYADAEKILELFIR
SHPRHILAQIIAVDLYRLLNNRAKEHASKAQYLALQGRFKEAIQEVGNALIYTENPLDKARYAAMMAGYQKDNLRLQALT
K
>Mature_481_residues
MLNKSLLLALYFFLSFFSGIANSSNALPEIGTVGAATLSIEKEQEYGWAFRLMANQSLPIIHDPVLNQYINELGQSLVSH
AESVRMPFDFFLIEDNEINAAAFLGGNVKIHTGLFLYAKNESELASVIAHEIAHITQRHLARMLEQQSSNTPTSLAAMAG
SILLTLVSPAAGMAALTTTMAVSIQSQINYTRTHEYEADRIGIKTLADAGYDPNGMAQFFGELAEKYKYASLPPKMLSTH
PLPEARLSEARLRASQYKTKNITNSLDYQLSKARITVRFSSINPTSAINLYESQLKKQKYEIKEAALYGLALAYFENKDF
LQAQDIINDLLKAQSGNLFYIDLATDTALALNKADEIIEKLQQLYKKSPDNPVYTINLVAALQEDKRYADAEKILELFIR
SHPRHILAQIIAVDLYRLLNNRAKEHASKAQYLALQGRFKEAIQEVGNALIYTENPLDKARYAAMMAGYQKDNLRLQALT
K

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=427, Percent_Identity=43.3255269320843, Blast_Score=328, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53744; Mature: 53744

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKSLLLALYFFLSFFSGIANSSNALPEIGTVGAATLSIEKEQEYGWAFRLMANQSLPI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
IHDPVLNQYINELGQSLVSHAESVRMPFDFFLIEDNEINAAAFLGGNVKIHTGLFLYAKN
EECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEEEECC
ESELASVIAHEIAHITQRHLARMLEQQSSNTPTSLAAMAGSILLTLVSPAAGMAALTTTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AVSIQSQINYTRTHEYEADRIGIKTLADAGYDPNGMAQFFGELAEKYKYASLPPKMLSTH
HHHHHHHCCCCCCCCCCCHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
PLPEARLSEARLRASQYKTKNITNSLDYQLSKARITVRFSSINPTSAINLYESQLKKQKY
CCCHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EIKEAALYGLALAYFENKDFLQAQDIINDLLKAQSGNLFYIDLATDTALALNKADEIIEK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
LQQLYKKSPDNPVYTINLVAALQEDKRYADAEKILELFIRSHPRHILAQIIAVDLYRLLN
HHHHHHCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NRAKEHASKAQYLALQGRFKEAIQEVGNALIYTENPLDKARYAAMMAGYQKDNLRLQALT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEC
K
C
>Mature Secondary Structure
MLNKSLLLALYFFLSFFSGIANSSNALPEIGTVGAATLSIEKEQEYGWAFRLMANQSLPI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
IHDPVLNQYINELGQSLVSHAESVRMPFDFFLIEDNEINAAAFLGGNVKIHTGLFLYAKN
EECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEEEECC
ESELASVIAHEIAHITQRHLARMLEQQSSNTPTSLAAMAGSILLTLVSPAAGMAALTTTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AVSIQSQINYTRTHEYEADRIGIKTLADAGYDPNGMAQFFGELAEKYKYASLPPKMLSTH
HHHHHHHCCCCCCCCCCCHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
PLPEARLSEARLRASQYKTKNITNSLDYQLSKARITVRFSSINPTSAINLYESQLKKQKY
CCCHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EIKEAALYGLALAYFENKDFLQAQDIINDLLKAQSGNLFYIDLATDTALALNKADEIIEK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
LQQLYKKSPDNPVYTINLVAALQEDKRYADAEKILELFIRSHPRHILAQIIAVDLYRLLN
HHHHHHCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NRAKEHASKAQYLALQGRFKEAIQEVGNALIYTENPLDKARYAAMMAGYQKDNLRLQALT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]