Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is bcp [H]
Identifier: 119944690
GI number: 119944690
Start: 1164725
End: 1165201
Strand: Reverse
Name: bcp [H]
Synonym: Ping_0929
Alternate gene names: 119944690
Gene position: 1165201-1164725 (Counterclockwise)
Preceding gene: 119944691
Following gene: 119944687
Centisome position: 25.55
GC content: 38.16
Gene sequence:
>477_bases ATGAAACGATTGGTGGCTGGAGATAAGGCTCCATTATTTAATTTACATGATGAGCAAGGTAAGATGATTGCTTTAGCTGA TTTAACCGGTAAAAAAGTGTTGGTTTATTTTTACCCTAAAGCGATGACCCCAGGTTGTATTAACCAAGCCTGCGGTTTGC GCGATGTAAAAACACAACTTGATGATTTTAATACTCTGGTCTTCGGTATCAGCCCGGATCCGGTGAAAAGTTTAGCTAAT TTTGTGACTAAAAAGGAGCTTAACTTTCCACTTTTATCTGACCAAGATCATGCGGTGGCAGAGGAATTTGGTGTTTGGGG AGAAAAGAAGTTCATGGGTAAAGTCTATGATGGTATTCACCGTATTAGCTTCCTGATAAATGAACAAGGGATCATTGAGC ACGTATTTGATAAATTTAAAACCACTGACCATCAACAGGTGGTCTTAGACTATTTGAAAAACAAAGAAAGCATTTAA
Upstream 100 bases:
>100_bases GGCCACACAGCAGAGCAGGTTATCGATAATTTGAACTGTGATTTGCTGGCTTTAAAACCTGCTGGCTTTATTAGTCCAAT TACACTGTAAAGGGAAAATT
Downstream 100 bases:
>100_bases TCAAAAGAAGGGCCAACGGCCCTTCTCGGTTTAACCTAACCTAACTTATCTTCTTCTGCATTTTCAATCTTAGCTTGTAT GTTTGGCCAGGCGTTTAATA
Product: bacterioferritin comigratory protein (Bcp)
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKRLVAGDKAPLFNLHDEQGKMIALADLTGKKVLVYFYPKAMTPGCINQACGLRDVKTQLDDFNTLVFGISPDPVKSLAN FVTKKELNFPLLSDQDHAVAEEFGVWGEKKFMGKVYDGIHRISFLINEQGIIEHVFDKFKTTDHQQVVLDYLKNKESI
Sequences:
>Translated_158_residues MKRLVAGDKAPLFNLHDEQGKMIALADLTGKKVLVYFYPKAMTPGCINQACGLRDVKTQLDDFNTLVFGISPDPVKSLAN FVTKKELNFPLLSDQDHAVAEEFGVWGEKKFMGKVYDGIHRISFLINEQGIIEHVFDKFKTTDHQQVVLDYLKNKESI >Mature_158_residues MKRLVAGDKAPLFNLHDEQGKMIALADLTGKKVLVYFYPKAMTPGCINQACGLRDVKTQLDDFNTLVFGISPDPVKSLAN FVTKKELNFPLLSDQDHAVAEEFGVWGEKKFMGKVYDGIHRISFLINEQGIIEHVFDKFKTTDHQQVVLDYLKNKESI
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=60.7843137254902, Blast_Score=191, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322180, Length=109, Percent_Identity=41.2844036697248, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17876; Mature: 17876
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLVAGDKAPLFNLHDEQGKMIALADLTGKKVLVYFYPKAMTPGCINQACGLRDVKTQL CCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHH DDFNTLVFGISPDPVKSLANFVTKKELNFPLLSDQDHAVAEEFGVWGEKKFMGKVYDGIH CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH RISFLINEQGIIEHVFDKFKTTDHQQVVLDYLKNKESI HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLVAGDKAPLFNLHDEQGKMIALADLTGKKVLVYFYPKAMTPGCINQACGLRDVKTQL CCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHH DDFNTLVFGISPDPVKSLANFVTKKELNFPLLSDQDHAVAEEFGVWGEKKFMGKVYDGIH CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH RISFLINEQGIIEHVFDKFKTTDHQQVVLDYLKNKESI HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]