Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944659
Identifier: 119944659
GI number: 119944659
Start: 1126789
End: 1127298
Strand: Reverse
Name: 119944659
Synonym: Ping_0898
Alternate gene names: NA
Gene position: 1127298-1126789 (Counterclockwise)
Preceding gene: 119944669
Following gene: 119944655
Centisome position: 24.72
GC content: 42.94
Gene sequence:
>510_bases ATGCCAAAAAAATTTCTTAAACGTTTTACTCCAAAACCTGAAACGTTAAAAGCACATCCTCACCTTAGGCATTTTGGCGA AATGCTGCATAATCCCAATCTATGGCACTTAAACCGCCGCAGTGCAGCAGGTGCAGTGGCTGTTGGTCTCTTTTGTGCCT GGATACCCATTCCTTTCCAGATGTTCTTAGCCGCTGCTATCGCCATTATATTTACGGTTAACCTGCCTTTATCCGTTGCC TTAGTTTGGCTTTCAAACCCGCTGACGATGGGGCCGTTATTTTATGGCGCTTACCGTTTAGGGGCTTATATCATGCATCT GCCTGTGCAGCATTTTAACTTTGAATTATCTTATAGCTGGTTATGTGCAACTTTTGAAACCATCGCCCCACCACTGTTTC TAGGTGCACTGCTCCTTGGCAGTATAAGTGCCTTTTTGGGGTATTTCCTATTTCGTGCTTTTTGGCGTTTTACTGTTACC AAAAAATGGCAACGCAGAAATAAAAAATAA
Upstream 100 bases:
>100_bases TAATAATCGTGGCCAAAATAGGCTTGATATAAAAACAATAATTGACAGCCACAATAATAGACGCATTGTCATTCAATCCA TTTAAGTAAACCTTAATTAT
Downstream 100 bases:
>100_bases CCCCGGTAATCTGCAAGTCCATTGATTTTTTTCATTAATGCGGGATAAAATATCTGCTAACGAGACATAAAATAATGTTT TAGTCTTTGCTATTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPKKFLKRFTPKPETLKAHPHLRHFGEMLHNPNLWHLNRRSAAGAVAVGLFCAWIPIPFQMFLAAAIAIIFTVNLPLSVA LVWLSNPLTMGPLFYGAYRLGAYIMHLPVQHFNFELSYSWLCATFETIAPPLFLGALLLGSISAFLGYFLFRAFWRFTVT KKWQRRNKK
Sequences:
>Translated_169_residues MPKKFLKRFTPKPETLKAHPHLRHFGEMLHNPNLWHLNRRSAAGAVAVGLFCAWIPIPFQMFLAAAIAIIFTVNLPLSVA LVWLSNPLTMGPLFYGAYRLGAYIMHLPVQHFNFELSYSWLCATFETIAPPLFLGALLLGSISAFLGYFLFRAFWRFTVT KKWQRRNKK >Mature_168_residues PKKFLKRFTPKPETLKAHPHLRHFGEMLHNPNLWHLNRRSAAGAVAVGLFCAWIPIPFQMFLAAAIAIIFTVNLPLSVAL VWLSNPLTMGPLFYGAYRLGAYIMHLPVQHFNFELSYSWLCATFETIAPPLFLGALLLGSISAFLGYFLFRAFWRFTVTK KWQRRNKK
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19436; Mature: 19305
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKFLKRFTPKPETLKAHPHLRHFGEMLHNPNLWHLNRRSAAGAVAVGLFCAWIPIPFQ CCHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH MFLAAAIAIIFTVNLPLSVALVWLSNPLTMGPLFYGAYRLGAYIMHLPVQHFNFELSYSW HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCEEEHHHH LCATFETIAPPLFLGALLLGSISAFLGYFLFRAFWRFTVTKKWQRRNKK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKKFLKRFTPKPETLKAHPHLRHFGEMLHNPNLWHLNRRSAAGAVAVGLFCAWIPIPFQ CHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH MFLAAAIAIIFTVNLPLSVALVWLSNPLTMGPLFYGAYRLGAYIMHLPVQHFNFELSYSW HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCEEEHHHH LCATFETIAPPLFLGALLLGSISAFLGYFLFRAFWRFTVTKKWQRRNKK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA