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The map label for this gene is engD [H]

Identifier: 119944669

GI number: 119944669

Start: 1138033

End: 1139124

Strand: Reverse

Name: engD [H]

Synonym: Ping_0908

Alternate gene names: 119944669

Gene position: 1139124-1138033 (Counterclockwise)

Preceding gene: 119944670

Following gene: 119944659

Centisome position: 24.98

GC content: 42.86

Gene sequence:

>1092_bases
ATGGGTTTCAAATGTGGCATAGTAGGCTTACCCAATGTTGGTAAATCAACATTATTTAACGCGTTAACAAAAGCGGGCAT
TGAAGCTGCTAACTTTCCATTTTGTACGATTGAGCCTAATACGGGTATCGTGCCGGTACCGGATCATCGCCTCGATAAAC
TAGCTGAAATTGTTAATCCGCAGCGCGTTTTACCAACAACAATGGAATTTGTTGATATTGCAGGTTTAGTTGAAGGCGCC
TCTAAAGGTGAAGGACTGGGTAATAAGTTTCTCGCGAACATCCGTGAAACCGATGCCATTGGGCACGTTGTGCGCTGCTT
CCAAGATGACAACGTTGTTCACGTCGCGGGTAAAATCGATCCTAAAGACGATATTGACATTATCAATACCGAACTGGCAT
TGGCCGATTTAGACAGTTGTGATCGTATCCTTTTACGTCTCACCAAAAAAGCCAAAAGTGGCGACAAAGATGCCAAATTT
GAAGTACCGGTGTTGGAAAAAATAAAAGCGCATCTTGAAGCTGACGGTTTAGTACGCGGGCTTGAATTAACGGTAGAGGA
AAAAGCAGCGGTTGCCTACCTTAACTTTCTGACCGGCAAACCGACCATGTACATTGCCAATGTCAGTGAAGATGGTTTTG
AAAATAACCCCTATTTAGATATTGTTCGTGAAATAGCAGAAAAAGAAGGTTCAGTGGTCGTCGCTGTTTGTGCTTCAATA
GAATCTGAAATCGCTGAGCTTGATGAAGAAGATAAAAAAGAGTTTCTCGAAGGCATAGGTCAGGAAGAAGCTGGCTTAAA
CCGCGTTATCAATAGCGGCTATCAATTATTGCATCTACAGACCTACTTTACAGCCGGTGTTAAAGAAGTGCGCGCCTGGA
CAGTTAAAGTCGGTGCAACAGCACCACAGGCAGCTGGTGTTATCCACACTGATTTTGAGCGTGGTTTTATCCGTGCAGAA
GTAATAGCCTATGATGATTTTGTTGAATGTAAAGGTGAAGCAGGTGCTAAAGAAGCCGGTAAATGGCGCTTGGAAGGTAA
AAACTACGTAACTAAAGATGGTGATGTAATACATTTCCGCTTTAATGTTTAA

Upstream 100 bases:

>100_bases
CTGGAAAAAGCGATGAATCGCTTACATAGTTTTAAAGCAGAAAAATAATCCGCTTAACACCCCGCAATTAACACACAACT
AACAAAATAGGATATAAATC

Downstream 100 bases:

>100_bases
CATTTAACCTTAGCATTTATCTTTAAAAGGCAACTTCTGTTGCCTTTTTTATATTACCTTTAAAAGTATTTTATTATTGT
TATTACGCTTTAACTAATCA

Product: GTP-binding protein YchF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNPQRVLPTTMEFVDIAGLVEGA
SKGEGLGNKFLANIRETDAIGHVVRCFQDDNVVHVAGKIDPKDDIDIINTELALADLDSCDRILLRLTKKAKSGDKDAKF
EVPVLEKIKAHLEADGLVRGLELTVEEKAAVAYLNFLTGKPTMYIANVSEDGFENNPYLDIVREIAEKEGSVVVAVCASI
ESEIAELDEEDKKEFLEGIGQEEAGLNRVINSGYQLLHLQTYFTAGVKEVRAWTVKVGATAPQAAGVIHTDFERGFIRAE
VIAYDDFVECKGEAGAKEAGKWRLEGKNYVTKDGDVIHFRFNV

Sequences:

>Translated_363_residues
MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNPQRVLPTTMEFVDIAGLVEGA
SKGEGLGNKFLANIRETDAIGHVVRCFQDDNVVHVAGKIDPKDDIDIINTELALADLDSCDRILLRLTKKAKSGDKDAKF
EVPVLEKIKAHLEADGLVRGLELTVEEKAAVAYLNFLTGKPTMYIANVSEDGFENNPYLDIVREIAEKEGSVVVAVCASI
ESEIAELDEEDKKEFLEGIGQEEAGLNRVINSGYQLLHLQTYFTAGVKEVRAWTVKVGATAPQAAGVIHTDFERGFIRAE
VIAYDDFVECKGEAGAKEAGKWRLEGKNYVTKDGDVIHFRFNV
>Mature_362_residues
GFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNPQRVLPTTMEFVDIAGLVEGAS
KGEGLGNKFLANIRETDAIGHVVRCFQDDNVVHVAGKIDPKDDIDIINTELALADLDSCDRILLRLTKKAKSGDKDAKFE
VPVLEKIKAHLEADGLVRGLELTVEEKAAVAYLNFLTGKPTMYIANVSEDGFENNPYLDIVREIAEKEGSVVVAVCASIE
SEIAELDEEDKKEFLEGIGQEEAGLNRVINSGYQLLHLQTYFTAGVKEVRAWTVKVGATAPQAAGVIHTDFERGFIRAEV
IAYDDFVECKGEAGAKEAGKWRLEGKNYVTKDGDVIHFRFNV

Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=371, Percent_Identity=44.4743935309973, Blast_Score=306, Evalue=1e-83,
Organism=Homo sapiens, GI58761502, Length=235, Percent_Identity=37.8723404255319, Blast_Score=157, Evalue=1e-38,
Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=75.2066115702479, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI1789574, Length=172, Percent_Identity=29.6511627906977, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17509631, Length=368, Percent_Identity=42.6630434782609, Blast_Score=289, Evalue=1e-78,
Organism=Saccharomyces cerevisiae, GI6319499, Length=369, Percent_Identity=40.9214092140921, Blast_Score=258, Evalue=8e-70,
Organism=Saccharomyces cerevisiae, GI6321773, Length=380, Percent_Identity=34.7368421052632, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6321649, Length=145, Percent_Identity=40.6896551724138, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24640873, Length=366, Percent_Identity=44.2622950819672, Blast_Score=300, Evalue=8e-82,
Organism=Drosophila melanogaster, GI24640877, Length=366, Percent_Identity=44.2622950819672, Blast_Score=300, Evalue=8e-82,
Organism=Drosophila melanogaster, GI24640875, Length=366, Percent_Identity=44.2622950819672, Blast_Score=300, Evalue=8e-82,
Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=42.0731707317073, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24585318, Length=194, Percent_Identity=31.4432989690722, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 39606; Mature: 39475

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNP
CCEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC
QRVLPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFQDDNVVHVAGKID
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PKDDIDIINTELALADLDSCDRILLRLTKKAKSGDKDAKFEVPVLEKIKAHLEADGLVRG
CCCCCEEEECEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCEEE
LELTVEEKAAVAYLNFLTGKPTMYIANVSEDGFENNPYLDIVREIAEKEGSVVVAVCASI
EEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHH
ESEIAELDEEDKKEFLEGIGQEEAGLNRVINSGYQLLHLQTYFTAGVKEVRAWTVKVGAT
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHEEEEEEECCC
APQAAGVIHTDFERGFIRAEVIAYDDFVECKGEAGAKEAGKWRLEGKNYVTKDGDVIHFR
CCCCCCCEEECCCCCEEEEEEEEECCHHCCCCCCCCCCCCCEEECCCCEEECCCCEEEEE
FNV
ECC
>Mature Secondary Structure 
GFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNP
CEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC
QRVLPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFQDDNVVHVAGKID
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PKDDIDIINTELALADLDSCDRILLRLTKKAKSGDKDAKFEVPVLEKIKAHLEADGLVRG
CCCCCEEEECEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCCEEE
LELTVEEKAAVAYLNFLTGKPTMYIANVSEDGFENNPYLDIVREIAEKEGSVVVAVCASI
EEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHH
ESEIAELDEEDKKEFLEGIGQEEAGLNRVINSGYQLLHLQTYFTAGVKEVRAWTVKVGAT
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHEEEEEEECCC
APQAAGVIHTDFERGFIRAEVIAYDDFVECKGEAGAKEAGKWRLEGKNYVTKDGDVIHFR
CCCCCCCEEECCCCCEEEEEEEEECCHHCCCCCCCCCCCCCEEECCCCEEECCCCEEEEE
FNV
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA