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The map label for this gene is yaeJ [C]

Identifier: 119944651

GI number: 119944651

Start: 1114832

End: 1115248

Strand: Direct

Name: yaeJ [C]

Synonym: Ping_0890

Alternate gene names: 119944651

Gene position: 1114832-1115248 (Clockwise)

Preceding gene: 119944650

Following gene: 119944652

Centisome position: 24.45

GC content: 41.25

Gene sequence:

>417_bases
ATGTTAAAAATATCAAATAATGTCGAGCTTGCTGACTGGGAAATCGACATGACTGCCATTCGTGCACAGGGAGCCGGCGG
GCAAAATGTGAACAAAGTTTCCAGCGCGATTCATTTACGCTTTGATATCAAAAAATCAACCTTACCCGATTTTTATAAAG
AGAGATTATTAGCATTATCCGATAGCCGTATCACAGGCGATGGCGTGATAATAATCAAAGCTCAAAGCCATCGCACGCAA
GAGAAAAATAGAGATGATGCACTGCAGCGTTTAAAGAACCTGATTGTCTCGGCAGCTGTGGTTCAAAAAGTACGACGAGC
GACGAGAGCCACAAAAGGTTCACAACGTAAACGTATGGATAAAAAAACCCAAAGGGGACGGATTAAAAATCTGCGCAGTA
AAAATAATGATGATTAA

Upstream 100 bases:

>100_bases
CGATCTATAAAAAGCACTATCTGGATAAAAAACCAACATCCAAAGAAATGTTTAAGTGACCTAACAAATTAAAAGATAAT
TTATAAGTTAAAGGAGTGTA

Downstream 100 bases:

>100_bases
TACTCAATCAGCTGGTAAATACTCTGTTAAGCATGGGTTATATTTAAACTGTTTCCTGAAGTAGGCCGGTCAAAATGGGA
TACAATATTAAGGGAAGCGT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLKISNNVELADWEIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKSTLPDFYKERLLALSDSRITGDGVIIIKAQSHRTQ
EKNRDDALQRLKNLIVSAAVVQKVRRATRATKGSQRKRMDKKTQRGRIKNLRSKNNDD

Sequences:

>Translated_138_residues
MLKISNNVELADWEIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKSTLPDFYKERLLALSDSRITGDGVIIIKAQSHRTQ
EKNRDDALQRLKNLIVSAAVVQKVRRATRATKGSQRKRMDKKTQRGRIKNLRSKNNDD
>Mature_138_residues
MLKISNNVELADWEIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKSTLPDFYKERLLALSDSRITGDGVIIIKAQSHRTQ
EKNRDDALQRLKNLIVSAAVVQKVRRATRATKGSQRKRMDKKTQRGRIKNLRSKNNDD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=134, Percent_Identity=53.7313432835821, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15640; Mature: 15640

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKISNNVELADWEIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKSTLPDFYKERLLALS
CEEECCCCEEEEEEEEHHHEEECCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC
DSRITGDGVIIIKAQSHRTQEKNRDDALQRLKNLIVSAAVVQKVRRATRATKGSQRKRMD
CCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKTQRGRIKNLRSKNNDD
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKISNNVELADWEIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKSTLPDFYKERLLALS
CEEECCCCEEEEEEEEHHHEEECCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC
DSRITGDGVIIIKAQSHRTQEKNRDDALQRLKNLIVSAAVVQKVRRATRATKGSQRKRMD
CCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKTQRGRIKNLRSKNNDD
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]