Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is yfiP [C]
Identifier: 119944650
GI number: 119944650
Start: 1114164
End: 1114790
Strand: Direct
Name: yfiP [C]
Synonym: Ping_0889
Alternate gene names: 119944650
Gene position: 1114164-1114790 (Clockwise)
Preceding gene: 119944647
Following gene: 119944651
Centisome position: 24.44
GC content: 36.84
Gene sequence:
>627_bases ATGAGTAAAAGAGCTGTTTGCAAACGCTGCTTAAAAGCCCAATCTGCCTGTATCTGCTCAGCGATCCAGTTGATTGATAA TCAACACTTTGTGCATGTATTGCAAGATCCCGGTGAAGAAAAAAATGCGATAGGCACTGCGCGAATTTTGGGGCTGTCAT TAAAACGATCAAAAATTAGCGTAGGGGTATTGTTTGATGCCGGTTTATTTGATTTACAGAATAGCTATTTAGTTTTTCCC GATGCCTCGGCAGTCCCTACGGAGCAGCTTGTTAATCTGAAAAAAATTAATAACCACAGCGTTTTTATTTTGCTCGATGG CAGTTGGAAAAAAGCCTACAAATTATTGATGAGTAATGTTTTTTTACAGAATTTGCCGAAGATATCAATTAATATAGATA AAAAAAGCGAGTATCGTATTCGTAAATCACCACGTGATGATGGTTTGTCGACGGTTGAAGCGGGTTATTATTTACTTTCC CAATTGGAAGAAAATAAAGAAAAATTTGTCCCCTTATTAACCAGTTTTAATAGAATGATCGACTATCAAATAGCATCTAT GCCGGCGGCGATCTATAAAAAGCACTATCTGGATAAAAAACCAACATCCAAAGAAATGTTTAAGTGA
Upstream 100 bases:
>100_bases TCCGGCTCAAACAAATAAAGTATAAGAGTCAGTAATATTATCAATGACGTTTCGATAATAAGAGAGCGCATCGGTTTCCT TTATTAAGAGATTTTTATAA
Downstream 100 bases:
>100_bases CCTAACAAATTAAAAGATAATTTATAAGTTAAAGGAGTGTAATGTTAAAAATATCAAATAATGTCGAGCTTGCTGACTGG GAAATCGACATGACTGCCAT
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein; Dtw Domain Containing Protein; Cytoplasmic Protein; DTW Protein; DTW Domain; Dtw Domain Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSKRAVCKRCLKAQSACICSAIQLIDNQHFVHVLQDPGEEKNAIGTARILGLSLKRSKISVGVLFDAGLFDLQNSYLVFP DASAVPTEQLVNLKKINNHSVFILLDGSWKKAYKLLMSNVFLQNLPKISINIDKKSEYRIRKSPRDDGLSTVEAGYYLLS QLEENKEKFVPLLTSFNRMIDYQIASMPAAIYKKHYLDKKPTSKEMFK
Sequences:
>Translated_208_residues MSKRAVCKRCLKAQSACICSAIQLIDNQHFVHVLQDPGEEKNAIGTARILGLSLKRSKISVGVLFDAGLFDLQNSYLVFP DASAVPTEQLVNLKKINNHSVFILLDGSWKKAYKLLMSNVFLQNLPKISINIDKKSEYRIRKSPRDDGLSTVEAGYYLLS QLEENKEKFVPLLTSFNRMIDYQIASMPAAIYKKHYLDKKPTSKEMFK >Mature_207_residues SKRAVCKRCLKAQSACICSAIQLIDNQHFVHVLQDPGEEKNAIGTARILGLSLKRSKISVGVLFDAGLFDLQNSYLVFPD ASAVPTEQLVNLKKINNHSVFILLDGSWKKAYKLLMSNVFLQNLPKISINIDKKSEYRIRKSPRDDGLSTVEAGYYLLSQ LEENKEKFVPLLTSFNRMIDYQIASMPAAIYKKHYLDKKPTSKEMFK
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27734779, Length=194, Percent_Identity=26.2886597938144, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI87082133, Length=161, Percent_Identity=26.7080745341615, Blast_Score=65, Evalue=3e-12, Organism=Drosophila melanogaster, GI21358337, Length=230, Percent_Identity=26.0869565217391, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23590; Mature: 23459
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRAVCKRCLKAQSACICSAIQLIDNQHFVHVLQDPGEEKNAIGTARILGLSLKRSKIS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEHEECCEEE VGVLFDAGLFDLQNSYLVFPDASAVPTEQLVNLKKINNHSVFILLDGSWKKAYKLLMSNV EEEEEECCHHHCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH FLQNLPKISINIDKKSEYRIRKSPRDDGLSTVEAGYYLLSQLEENKEKFVPLLTSFNRMI HHHCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYQIASMPAAIYKKHYLDKKPTSKEMFK HHHHHHCCHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure SKRAVCKRCLKAQSACICSAIQLIDNQHFVHVLQDPGEEKNAIGTARILGLSLKRSKIS CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEHEECCEEE VGVLFDAGLFDLQNSYLVFPDASAVPTEQLVNLKKINNHSVFILLDGSWKKAYKLLMSNV EEEEEECCHHHCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHH FLQNLPKISINIDKKSEYRIRKSPRDDGLSTVEAGYYLLSQLEENKEKFVPLLTSFNRMI HHHCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYQIASMPAAIYKKHYLDKKPTSKEMFK HHHHHHCCHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA