Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is sseA [H]
Identifier: 119944615
GI number: 119944615
Start: 1072002
End: 1072871
Strand: Direct
Name: sseA [H]
Synonym: Ping_0854
Alternate gene names: 119944615
Gene position: 1072002-1072871 (Clockwise)
Preceding gene: 119944612
Following gene: 119944616
Centisome position: 23.51
GC content: 44.37
Gene sequence:
>870_bases ATGCCATCGTTAAAAATACCCGGCCCGTTGGTTTCAATAGACTGGTTAGAAAAACACCTTAGTCACCCTGATCTGGTTAT TCTGGACGGTAGCTGGCATATGCCCAGTGTTAAACGCGATGGCAAATTAGAATGCCTTAAACAGCGTATACCCGGCGCAC TGTTTTTTGATTTTAACCGTGAAATTTGTCACCAGAACAATCCCCTACCGCATATGATGCCAAGTGAATCAGACTTTCAA GAATCTGTACAAAACCTCGGTATCAATCAAAGAAGTACTATTGTTGTTTATGATACCGTGGGGATATTCTCAAGCCCGCG CGTCTGGTGGATGTTTAAAACCATGGGATTTGAAAATGTCGCCGTATTAGACAGCGGTTTTCCTGCCTGGTTAGAAAAAT CATTACCCATTGAAAGTGGGCATATCCCTCAACCAGTTGTAAAAGGCGATTTTATCGCAAACTACCAGAAGGCATTGATC TGCACTGCGGAAGATGTATTGCAGGCATCCGGCAGTTCTCAGCAGAGTATTATTGATGCTCGCCCCTCTGCGCGCTTTTT AGGGCAACAAGCAGAGCCAAGAGCCGGTATACGGGTAGGACATATGCCTAATGCGCAAAACTTACCCTCAACCAGTGTCC TTGAAAATAATAAGATGAAGGATGCTTATCAACTTGCGTTAATTTTTGAGGCCCTTTCAGGAAAAGATAAACGGGTTATT TTTAGTTGTGGTTCGGGGGTGACGGCTTGTATTTTAGCACTGGCCGCGAGCCTCGCAGGTTATGAAAATATTGGCGTTTA TGATGGTTCATGGGCTGAATGGGGAAGCAGAGTCGATCTTCCTGTTATAGCAGAAGAAAACAGCCATTAA
Upstream 100 bases:
>100_bases TTAATATCAGAATTATATGATAAATTAACGGTTTGTTAAAAAGCCGTTATTATTGTTCTTATTTTGAACTCGCAGACACT CTTTCGCACAAGGAATTATT
Downstream 100 bases:
>100_bases GTAGGTGAATATATAAAATCAAACATATTTATAATGTAATATCTACATATAGCAATTGGATAGTGAATTCACATGTTCGA AAACTTATGCTTCATTACTT
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPSLKIPGPLVSIDWLEKHLSHPDLVILDGSWHMPSVKRDGKLECLKQRIPGALFFDFNREICHQNNPLPHMMPSESDFQ ESVQNLGINQRSTIVVYDTVGIFSSPRVWWMFKTMGFENVAVLDSGFPAWLEKSLPIESGHIPQPVVKGDFIANYQKALI CTAEDVLQASGSSQQSIIDARPSARFLGQQAEPRAGIRVGHMPNAQNLPSTSVLENNKMKDAYQLALIFEALSGKDKRVI FSCGSGVTACILALAASLAGYENIGVYDGSWAEWGSRVDLPVIAEENSH
Sequences:
>Translated_289_residues MPSLKIPGPLVSIDWLEKHLSHPDLVILDGSWHMPSVKRDGKLECLKQRIPGALFFDFNREICHQNNPLPHMMPSESDFQ ESVQNLGINQRSTIVVYDTVGIFSSPRVWWMFKTMGFENVAVLDSGFPAWLEKSLPIESGHIPQPVVKGDFIANYQKALI CTAEDVLQASGSSQQSIIDARPSARFLGQQAEPRAGIRVGHMPNAQNLPSTSVLENNKMKDAYQLALIFEALSGKDKRVI FSCGSGVTACILALAASLAGYENIGVYDGSWAEWGSRVDLPVIAEENSH >Mature_288_residues PSLKIPGPLVSIDWLEKHLSHPDLVILDGSWHMPSVKRDGKLECLKQRIPGALFFDFNREICHQNNPLPHMMPSESDFQE SVQNLGINQRSTIVVYDTVGIFSSPRVWWMFKTMGFENVAVLDSGFPAWLEKSLPIESGHIPQPVVKGDFIANYQKALIC TAEDVLQASGSSQQSIIDARPSARFLGQQAEPRAGIRVGHMPNAQNLPSTSVLENNKMKDAYQLALIFEALSGKDKRVIF SCGSGVTACILALAASLAGYENIGVYDGSWAEWGSRVDLPVIAEENSH
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=286, Percent_Identity=37.4125874125874, Blast_Score=194, Evalue=7e-50, Organism=Homo sapiens, GI61835204, Length=286, Percent_Identity=37.4125874125874, Blast_Score=194, Evalue=7e-50, Organism=Homo sapiens, GI194473681, Length=286, Percent_Identity=37.4125874125874, Blast_Score=194, Evalue=7e-50, Organism=Homo sapiens, GI17402865, Length=279, Percent_Identity=39.426523297491, Blast_Score=181, Evalue=1e-45, Organism=Escherichia coli, GI87082121, Length=275, Percent_Identity=40, Blast_Score=217, Evalue=6e-58, Organism=Escherichia coli, GI87081967, Length=274, Percent_Identity=25.5474452554745, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115534702, Length=229, Percent_Identity=28.82096069869, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324825, Length=269, Percent_Identity=34.9442379182156, Blast_Score=155, Evalue=1e-38,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31860; Mature: 31728
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLKIPGPLVSIDWLEKHLSHPDLVILDGSWHMPSVKRDGKLECLKQRIPGALFFDFNR CCCCCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCH EICHQNNPLPHMMPSESDFQESVQNLGINQRSTIVVYDTVGIFSSPRVWWMFKTMGFENV HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEE AVLDSGFPAWLEKSLPIESGHIPQPVVKGDFIANYQKALICTAEDVLQASGSSQQSIIDA EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHEEECHHHHHHCCCCCCHHHHHC RPSARFLGQQAEPRAGIRVGHMPNAQNLPSTSVLENNKMKDAYQLALIFEALSGKDKRVI CCCHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEE FSCGSGVTACILALAASLAGYENIGVYDGSWAEWGSRVDLPVIAEENSH EECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEECCCCC >Mature Secondary Structure PSLKIPGPLVSIDWLEKHLSHPDLVILDGSWHMPSVKRDGKLECLKQRIPGALFFDFNR CCCCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCH EICHQNNPLPHMMPSESDFQESVQNLGINQRSTIVVYDTVGIFSSPRVWWMFKTMGFENV HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEE AVLDSGFPAWLEKSLPIESGHIPQPVVKGDFIANYQKALICTAEDVLQASGSSQQSIIDA EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHEEECHHHHHHCCCCCCHHHHHC RPSARFLGQQAEPRAGIRVGHMPNAQNLPSTSVLENNKMKDAYQLALIFEALSGKDKRVI CCCHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEE FSCGSGVTACILALAASLAGYENIGVYDGSWAEWGSRVDLPVIAEENSH EECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]