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The map label for this gene is yqcC [C]

Identifier: 119944596

GI number: 119944596

Start: 1044080

End: 1044421

Strand: Direct

Name: yqcC [C]

Synonym: Ping_0834

Alternate gene names: 119944596

Gene position: 1044080-1044421 (Clockwise)

Preceding gene: 119944590

Following gene: 119944597

Centisome position: 22.9

GC content: 39.18

Gene sequence:

>342_bases
ATGTTAAAAATTGAATCGGAATTAAAAAAACGCCGCCTTATTTTGCCTTTATTGACTGCATTAGAAGATGAATTACGTAA
TAAGGGCTTATGGCAGGAGATTAAACCTGACCAGCAGGCACTCGATAGCAGGGAACCTTTTGCGATTGACAGCTTAAGCT
TTGTGCAGTGGTTACAATTTATTTTCTTAGATAAGATGGCTAAACTTGTGCGTTTGCCGCAACCCTTACCAAGTGGAATG
CAGGTCTTACCGATGGCGCAGGAATATTTTAAAAGTTTGCCGGTCAATAGTGCTGAAATAACCGATATTATCGGCCGTAT
TGATTTGTTATTTAGCGAATAA

Upstream 100 bases:

>100_bases
ACAGAGTCTTAAACTTTTGGCTAACCAATGAGTCAGTGATCTCTGCCGCCTTAATCTATATGATATTGGCATTATAAATC
TATTTCAGTTAGAAAGAATC

Downstream 100 bases:

>100_bases
TTTGCAACCCAGCCAGGTGAACTCTTTAAGGGGCAAGATGTTAAGGGGGAGCTTTATTGACTATACATTAAACCATGATA
TTGGGTCAGGCAAGGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA Pseudouridine Synthase C; DTDP-4-Dehydrorhamnose 3 5-Epimerase; Conserved Domain Protein

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLKIESELKKRRLILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLPQPLPSGM
QVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE

Sequences:

>Translated_113_residues
MLKIESELKKRRLILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLPQPLPSGM
QVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE
>Mature_113_residues
MLKIESELKKRRLILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQFIFLDKMAKLVRLPQPLPSGM
QVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13097; Mature: 13097

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIESELKKRRLILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
IFLDKMAKLVRLPQPLPSGMQVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKIESELKKRRLILPLLTALEDELRNKGLWQEIKPDQQALDSREPFAIDSLSFVQWLQF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
IFLDKMAKLVRLPQPLPSGMQVLPMAQEYFKSLPVNSAEITDIIGRIDLLFSE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA