| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yaeH [C]
Identifier: 119944486
GI number: 119944486
Start: 909456
End: 909833
Strand: Direct
Name: yaeH [C]
Synonym: Ping_0715
Alternate gene names: 119944486
Gene position: 909456-909833 (Clockwise)
Preceding gene: 119944482
Following gene: 119944487
Centisome position: 19.95
GC content: 35.19
Gene sequence:
>378_bases ATGTACTCAAATTTAAAAAGCATTGGTGTTGTAAATTATGACAATATCGATAAATATACACTTCGCCAGGAAGGCGATAC TGATATTCTAAAAATATATTTTCGTAAGGCTTCGCGCCAGTTTCTGGCTAAAAGTCTTAAGTTTAAATTTCCAAGGCAGA GAAAAAAAATAAGTCAGGATCACGGCAGTAGCGGATTTAGAAATGTTTCTGAGATTGGTAGCACCCTGCGTTATGTTCTA AAAGAGCTCGATTCGTTGACGGAACATGTCAAAGAAGAGAAAGAACTAAAAGTGCAGGTATTGGAGGATTTAAAACATTT GGAATCTGTGGTTGCAAGTAAAATAAAAGAAATTGAACGCAAACTAGAGCAAATGTAA
Upstream 100 bases:
>100_bases TCGAAGACCTTGCGCCTGACAAAGCATGTTGAAGTAACATGGGTATACACTCAGCTTAATCCGTATTACATAAGTTCATC ACTTATTTCAAGGAATTATT
Downstream 100 bases:
>100_bases TTATTTTTAAGCGTTACAAATAATTGAATCAAGAGAGCATTAAAGTTGCTCTTTTGATCTGTATCAGCTCCATATTACCC TTCATTTTGTTAACTATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYSNLKSIGVVNYDNIDKYTLRQEGDTDILKIYFRKASRQFLAKSLKFKFPRQRKKISQDHGSSGFRNVSEIGSTLRYVL KELDSLTEHVKEEKELKVQVLEDLKHLESVVASKIKEIERKLEQM
Sequences:
>Translated_125_residues MYSNLKSIGVVNYDNIDKYTLRQEGDTDILKIYFRKASRQFLAKSLKFKFPRQRKKISQDHGSSGFRNVSEIGSTLRYVL KELDSLTEHVKEEKELKVQVLEDLKHLESVVASKIKEIERKLEQM >Mature_125_residues MYSNLKSIGVVNYDNIDKYTLRQEGDTDILKIYFRKASRQFLAKSLKFKFPRQRKKISQDHGSSGFRNVSEIGSTLRYVL KELDSLTEHVKEEKELKVQVLEDLKHLESVVASKIKEIERKLEQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family
Homologues:
Organism=Escherichia coli, GI1786359, Length=125, Percent_Identity=52, Blast_Score=138, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y715_PSYIN (A1SSV2)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942166.1 - STRING: A1SSV2 - GeneID: 4625062 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0715 - eggNOG: NOG05865 - HOGENOM: HBG298613 - OMA: NLRYVIE - PhylomeDB: A1SSV2 - ProtClustDB: PRK13677 - BioCyc: PING357804:PING_0715-MONOMER - HAMAP: MF_01519 - InterPro: IPR020911
Pfam domain/function: PF11944 DUF3461
EC number: NA
Molecular weight: Translated: 14679; Mature: 14679
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNLKSIGVVNYDNIDKYTLRQEGDTDILKIYFRKASRQFLAKSLKFKFPRQRKKISQD CCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HGSSGFRNVSEIGSTLRYVLKELDSLTEHVKEEKELKVQVLEDLKHLESVVASKIKEIER CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLEQM HHHCC >Mature Secondary Structure MYSNLKSIGVVNYDNIDKYTLRQEGDTDILKIYFRKASRQFLAKSLKFKFPRQRKKISQD CCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH HGSSGFRNVSEIGSTLRYVLKELDSLTEHVKEEKELKVQVLEDLKHLESVVASKIKEIER CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLEQM HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA