| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is sfsA
Identifier: 119944482
GI number: 119944482
Start: 904388
End: 905074
Strand: Direct
Name: sfsA
Synonym: Ping_0711
Alternate gene names: 119944482
Gene position: 904388-905074 (Clockwise)
Preceding gene: 119944481
Following gene: 119944486
Centisome position: 19.83
GC content: 43.09
Gene sequence:
>687_bases ATGTTTGAAAATTTACAAAAAGCGATACTGATCAGGCGTTATAAGCGCTTTCTGGCCGATATTGAATTGCATAATGGGAA TGTTCTGACCATTTATTGTCCCAACACCGGAGCGATGACCGGGTGTGCAGAGCCGGGCGATCAGGTTTGGTACAGCACCT CAAACAATCTTAAACGTAAATATAAGTACACCTGGGAGCTCACTTTTACTAAAGGCGGTCACTGGATTTGCGTGAATACA GCCAGGGCTAACCAGTTGGTTAAAGAGGCGCTACATAATAGCGAAATCGAAGCGCTTTCGGGTTATAGCCAGATTAAAGC AGAAGTGAAGTATGGTACTGAAAATAGCCGCATCGATTTTCTGCTAAGCAATGAAAATAAAGCCGATTGTTATGTTGAAG TGAAAAGTTGTACTTTGCTTGAACAGCCCCTTGCCGAAGGCAAAGGTTTTTTCCCTGATACCGTCACAACGCGTGGTCAA AAACACCTTCGCGAGTTAATAGAAATGAAACAACAGGGTCATCGCAGTGTCTTACTGTTTGCTGTACTTCATAGTGGTAT TAAATCGGTGCAGGCAGCGGGGCACCTTGACGTGAAATATGCACAATTATTTGAGCAGGCTAAAAAAGCAGGCGTAGAAG TATATTGTTATTATCCTGAATTGACCCTGCCTTGCCTTGAAGAATAA
Upstream 100 bases:
>100_bases ACGGCGGATAGTTATTAAAAATAAGCTGATCCGCAACTGTTAAGTTAATGTGCCGGACCTTTTCCGCTTAAAATTTAACC AACTGGGGTAAGTTTAAAAT
Downstream 100 bases:
>100_bases CTTGCACCATAAAGCGGCTGCTTCGCGCAGTTTAAGAGCGTTCCGGCTCTTTATAATTTTGTTTTTCCAAATCGTGTTTT TGCATTTTATCGTAAAGGGT
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MFENLQKAILIRRYKRFLADIELHNGNVLTIYCPNTGAMTGCAEPGDQVWYSTSNNLKRKYKYTWELTFTKGGHWICVNT ARANQLVKEALHNSEIEALSGYSQIKAEVKYGTENSRIDFLLSNENKADCYVEVKSCTLLEQPLAEGKGFFPDTVTTRGQ KHLRELIEMKQQGHRSVLLFAVLHSGIKSVQAAGHLDVKYAQLFEQAKKAGVEVYCYYPELTLPCLEE
Sequences:
>Translated_228_residues MFENLQKAILIRRYKRFLADIELHNGNVLTIYCPNTGAMTGCAEPGDQVWYSTSNNLKRKYKYTWELTFTKGGHWICVNT ARANQLVKEALHNSEIEALSGYSQIKAEVKYGTENSRIDFLLSNENKADCYVEVKSCTLLEQPLAEGKGFFPDTVTTRGQ KHLRELIEMKQQGHRSVLLFAVLHSGIKSVQAAGHLDVKYAQLFEQAKKAGVEVYCYYPELTLPCLEE >Mature_228_residues MFENLQKAILIRRYKRFLADIELHNGNVLTIYCPNTGAMTGCAEPGDQVWYSTSNNLKRKYKYTWELTFTKGGHWICVNT ARANQLVKEALHNSEIEALSGYSQIKAEVKYGTENSRIDFLLSNENKADCYVEVKSCTLLEQPLAEGKGFFPDTVTTRGQ KHLRELIEMKQQGHRSVLLFAVLHSGIKSVQAAGHLDVKYAQLFEQAKKAGVEVYCYYPELTLPCLEE
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=218, Percent_Identity=58.2568807339449, Blast_Score=272, Evalue=1e-74,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_PSYIN (A1SSU8)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942162.1 - STRING: A1SSU8 - GeneID: 4625058 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0711 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: A1SSU8 - BioCyc: PING357804:PING_0711-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 25921; Mature: 25921
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFENLQKAILIRRYKRFLADIELHNGNVLTIYCPNTGAMTGCAEPGDQVWYSTSNNLKRK CCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEE YKYTWELTFTKGGHWICVNTARANQLVKEALHNSEIEALSGYSQIKAEVKYGTENSRIDF EEEEEEEEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHCCHHHHEEEEEECCCCCEEEE LLSNENKADCYVEVKSCTLLEQPLAEGKGFFPDTVTTRGQKHLRELIEMKQQGHRSVLLF EECCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHH AVLHSGIKSVQAAGHLDVKYAQLFEQAKKAGVEVYCYYPELTLPCLEE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MFENLQKAILIRRYKRFLADIELHNGNVLTIYCPNTGAMTGCAEPGDQVWYSTSNNLKRK CCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEE YKYTWELTFTKGGHWICVNTARANQLVKEALHNSEIEALSGYSQIKAEVKYGTENSRIDF EEEEEEEEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHCCHHHHEEEEEECCCCCEEEE LLSNENKADCYVEVKSCTLLEQPLAEGKGFFPDTVTTRGQKHLRELIEMKQQGHRSVLLF EECCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHH AVLHSGIKSVQAAGHLDVKYAQLFEQAKKAGVEVYCYYPELTLPCLEE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA