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The map label for this gene is ompW [H]

Identifier: 119944471

GI number: 119944471

Start: 891355

End: 891963

Strand: Reverse

Name: ompW [H]

Synonym: Ping_0700

Alternate gene names: 119944471

Gene position: 891963-891355 (Counterclockwise)

Preceding gene: 119944483

Following gene: 119944469

Centisome position: 19.56

GC content: 39.24

Gene sequence:

>609_bases
ATGATGAAAGCTATTCTATCTGTTGCACTTGTTTCTACCCTTTGTTCTTCTGTTGCTCTTGCTCATAATGCTGGTGACTT
ATTTGTTCGTGGTGGTGCTGCTATTGTTATGCCAAATGAAAGCAGTGATAAAGTGGGTGGCAATGAGTTAAAAATTGATA
ATAATACTCAAGCTGCGGCCACATTTACTTATATGACAACTGATAAAATAGGTATCGAGTTGCTTTTGGCGACACCCTTT
ACACATGATGTTTCTCTAGATGGCAATAAAGTGGCTGAAGTCTCTCAGTTACCCCCTTCTTTGATGGTGCAATACTATTT
TGGTCAGCCAGATAGTCAATTTCGTCCTTATGTTGGTGCGGGTCTGAACTATACTTTTTTCTTTGAAGAAGAAGGGTATG
GAGCATTATCTGGAACGGATGTTAGCGTAGATAATTCTCTGGGTGGGGCTGTTCAAGCTGGTTTGGATGTAAAACTTGAT
GAACATTGGTTTGCTAATGTTTCTGTTTGGTATATGGATATTAATACTGATGTTCATACCGCTGTTGGTACTATCAATAC
TGACATTGATCCCGTGTCTGCTATGTTGGGTCTTGGTTACACTTTTTAA

Upstream 100 bases:

>100_bases
GATGAAGTTTAATCAAAAATTGATCTAGATTAATAGTTCCCCGCATGATGCTTGTTAGCTTGCATGTCATTGATATTTTG
TTTAATAAAAAAGGAATCTG

Downstream 100 bases:

>100_bases
TTTAGCCTAATCTAAAGTGTTTTTTAAAAACCTTGGTGTTTTAATGACATCAAGGTTTTTTATTTTCTATCAGACAGAAA
GGCGGAAGGCGGAAGGCTTG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MMKAILSVALVSTLCSSVALAHNAGDLFVRGGAAIVMPNESSDKVGGNELKIDNNTQAAATFTYMTTDKIGIELLLATPF
THDVSLDGNKVAEVSQLPPSLMVQYYFGQPDSQFRPYVGAGLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLD
EHWFANVSVWYMDINTDVHTAVGTINTDIDPVSAMLGLGYTF

Sequences:

>Translated_202_residues
MMKAILSVALVSTLCSSVALAHNAGDLFVRGGAAIVMPNESSDKVGGNELKIDNNTQAAATFTYMTTDKIGIELLLATPF
THDVSLDGNKVAEVSQLPPSLMVQYYFGQPDSQFRPYVGAGLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLD
EHWFANVSVWYMDINTDVHTAVGTINTDIDPVSAMLGLGYTF
>Mature_202_residues
MMKAILSVALVSTLCSSVALAHNAGDLFVRGGAAIVMPNESSDKVGGNELKIDNNTQAAATFTYMTTDKIGIELLLATPF
THDVSLDGNKVAEVSQLPPSLMVQYYFGQPDSQFRPYVGAGLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLD
EHWFANVSVWYMDINTDVHTAVGTINTDIDPVSAMLGLGYTF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=43.3962264150943, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 21577; Mature: 21577

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKAILSVALVSTLCSSVALAHNAGDLFVRGGAAIVMPNESSDKVGGNELKIDNNTQAAA
CHHHHHHHHHHHHHHHHHHEECCCCCEEEECCEEEEEECCCCCCCCCCEEEECCCCCEEE
TFTYMTTDKIGIELLLATPFTHDVSLDGNKVAEVSQLPPSLMVQYYFGQPDSQFRPYVGA
EEEEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHCCHHHEEEEEECCCCCCCCCEECC
GLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLDEHWFANVSVWYMDINTDVHT
CCCEEEEEECCCCCEECCCCEEECCCCCCEEECCEEEEECCCEEEEEEEEEEEECCCCEE
AVGTINTDIDPVSAMLGLGYTF
EEEEECCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MMKAILSVALVSTLCSSVALAHNAGDLFVRGGAAIVMPNESSDKVGGNELKIDNNTQAAA
CHHHHHHHHHHHHHHHHHHEECCCCCEEEECCEEEEEECCCCCCCCCCEEEECCCCCEEE
TFTYMTTDKIGIELLLATPFTHDVSLDGNKVAEVSQLPPSLMVQYYFGQPDSQFRPYVGA
EEEEEEECCCCEEEEEECCCCEEEECCCCCCHHHHHCCHHHEEEEEECCCCCCCCCEECC
GLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLDEHWFANVSVWYMDINTDVHT
CCCEEEEEECCCCCEECCCCEEECCCCCCEEECCEEEEECCCEEEEEEEEEEEECCCCEE
AVGTINTDIDPVSAMLGLGYTF
EEEEECCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]