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The map label for this gene is cmoA

Identifier: 119944469

GI number: 119944469

Start: 888450

End: 889178

Strand: Reverse

Name: cmoA

Synonym: Ping_0698

Alternate gene names: 119944469

Gene position: 889178-888450 (Counterclockwise)

Preceding gene: 119944471

Following gene: 119944468

Centisome position: 19.5

GC content: 41.7

Gene sequence:

>729_bases
ATGAGTAAAACGGACAATATCTACAGCAAACGGCGCGCACAGATCGACGGATTTAGTTTTGATGAGCAGGTCGTGCAGGT
ATTCCCGGATATGATCAAACGCTCGGTGCCCGGTTATGAAACCATTATTAACAGCATCGGTACTATCACCGAACGCTGCG
CGGTTGAAAACAGTAATCTCTACGATTTGGGCTGCTCACTTGGTGCCGCAACCCTGTCGATGCGTCGCGGGCTGAATAAA
GCAGGATGCCAAATCATTGCGGTGGACAACTCACAGCAAATGGTTGAACGCTGTGAGCAATACATTCATGCTTATAAATC
CGATACACCTGTTCAGGTCTTATGTGATGATATTTGTAATATCCACATTGAAAATGCATCTGTTGTGATCTTGAATTTCA
CTCTGCAGTTTTTGACACCTGAAAAACGTTTAAACCTGCTTACCAATATCTATAACGGCTTATTACCAGGCGGGGTTTTA
GTGCTGTCGGAAAAATTTGTTTTTGAGGATCCGCTTAACCACCAGCTATTAAACGATCTGCATTTAGACTTTAAACGCAG
CCAGGGTTACAGTGAACTTGAAATTAGCCAGAAACGTGCCTCATTAGATAACGTTTTAATTGCCGATACCGTTGAACAAC
ATTATTTACGTTTACGAAAAGCCGGCTTTAAGCATAACAATCTCTGGTACCAATATTTTAATTTTGGCTCAATCATCAGT
ATTAAATAA

Upstream 100 bases:

>100_bases
GTTAATAGCAACACAGCTAAATAAAAAAATGACCATCTGCTTTATTTTAAGTAAAATACGGCGCAACATCTCAGCATGAA
TCACTAACGGGTAAACTAAC

Downstream 100 bases:

>100_bases
CTCTTTAAATCGAGGGTTAACAATCAGCATTAAATAATCCTTTAAATCGGGGGTTAACAATCAGCATTAAATAACCCTTT
AAATCGAGGGTTAACAATCA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSKTDNIYSKRRAQIDGFSFDEQVVQVFPDMIKRSVPGYETIINSIGTITERCAVENSNLYDLGCSLGAATLSMRRGLNK
AGCQIIAVDNSQQMVERCEQYIHAYKSDTPVQVLCDDICNIHIENASVVILNFTLQFLTPEKRLNLLTNIYNGLLPGGVL
VLSEKFVFEDPLNHQLLNDLHLDFKRSQGYSELEISQKRASLDNVLIADTVEQHYLRLRKAGFKHNNLWYQYFNFGSIIS
IK

Sequences:

>Translated_242_residues
MSKTDNIYSKRRAQIDGFSFDEQVVQVFPDMIKRSVPGYETIINSIGTITERCAVENSNLYDLGCSLGAATLSMRRGLNK
AGCQIIAVDNSQQMVERCEQYIHAYKSDTPVQVLCDDICNIHIENASVVILNFTLQFLTPEKRLNLLTNIYNGLLPGGVL
VLSEKFVFEDPLNHQLLNDLHLDFKRSQGYSELEISQKRASLDNVLIADTVEQHYLRLRKAGFKHNNLWYQYFNFGSIIS
IK
>Mature_241_residues
SKTDNIYSKRRAQIDGFSFDEQVVQVFPDMIKRSVPGYETIINSIGTITERCAVENSNLYDLGCSLGAATLSMRRGLNKA
GCQIIAVDNSQQMVERCEQYIHAYKSDTPVQVLCDDICNIHIENASVVILNFTLQFLTPEKRLNLLTNIYNGLLPGGVLV
LSEKFVFEDPLNHQLLNDLHLDFKRSQGYSELEISQKRASLDNVLIADTVEQHYLRLRKAGFKHNNLWYQYFNFGSIISI
K

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U)

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family

Homologues:

Organism=Escherichia coli, GI1788177, Length=242, Percent_Identity=57.4380165289256, Blast_Score=294, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOA_PSYIN (A1SST5)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942149.1
- ProteinModelPortal:   A1SST5
- SMR:   A1SST5
- STRING:   A1SST5
- GeneID:   4627029
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_0698
- eggNOG:   COG0500
- HOGENOM:   HBG296860
- OMA:   YSELEVS
- PhylomeDB:   A1SST5
- BioCyc:   PING357804:PING_0698-MONOMER
- HAMAP:   MF_01589
- InterPro:   IPR013216
- InterPro:   IPR005271
- PIRSF:   PIRSF006325
- TIGRFAMs:   TIGR00740

Pfam domain/function: PF08241 Methyltransf_11

EC number: NA

Molecular weight: Translated: 27561; Mature: 27430

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: BINDING 39-39 BINDING 89-89 BINDING 132-132 BINDING 199-199

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTDNIYSKRRAQIDGFSFDEQVVQVFPDMIKRSVPGYETIINSIGTITERCAVENSNL
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCE
YDLGCSLGAATLSMRRGLNKAGCQIIAVDNSQQMVERCEQYIHAYKSDTPVQVLCDDICN
EECCCHHHHHHHHHHHCCCHHCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
IHIENASVVILNFTLQFLTPEKRLNLLTNIYNGLLPGGVLVLSEKFVFEDPLNHQLLNDL
EEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHHHH
HLDFKRSQGYSELEISQKRASLDNVLIADTVEQHYLRLRKAGFKHNNLWYQYFNFGSIIS
HHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
IK
EC
>Mature Secondary Structure 
SKTDNIYSKRRAQIDGFSFDEQVVQVFPDMIKRSVPGYETIINSIGTITERCAVENSNL
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCE
YDLGCSLGAATLSMRRGLNKAGCQIIAVDNSQQMVERCEQYIHAYKSDTPVQVLCDDICN
EECCCHHHHHHHHHHHCCCHHCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
IHIENASVVILNFTLQFLTPEKRLNLLTNIYNGLLPGGVLVLSEKFVFEDPLNHQLLNDL
EEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHHHH
HLDFKRSQGYSELEISQKRASLDNVLIADTVEQHYLRLRKAGFKHNNLWYQYFNFGSIIS
HHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
IK
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA