| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944459
Identifier: 119944459
GI number: 119944459
Start: 873915
End: 875390
Strand: Reverse
Name: 119944459
Synonym: Ping_0687
Alternate gene names: NA
Gene position: 875390-873915 (Counterclockwise)
Preceding gene: 119944460
Following gene: 119944457
Centisome position: 19.2
GC content: 44.24
Gene sequence:
>1476_bases ATGATTAACAAAAATATTTTTCCTTTATCAGTGCTGCTTTCCTGTCTTTCCTGTAATAGTTTAGCGCTGGATAAAAATCA GCATCTAGCGGGCGGTACAGCCAGCGTGGACAACAAAATGGCCTCAGCCTTTTCAATGCATTCAGCGAATATGACCAAAG CCAAAAATATTTTAAGCTTTAACGGCGGCAATAAATTTTTTGAAGAGCCCTGGGCACAAAGTGTTGGTTCCGTAAGCTCT CAAGATGGGTTAGGTCCCCTTTTTAACAGTAATGCCTGTCAAAATTGTCATGTACGTGATGGCCGGGGACATGCATCGGA AGCTGCAAAGGGGCAATTGGGGAATGATTTTTCTACCCTGTTAATTCGCGCCTCCAAGAGTGAGCTAACAACAGCGCAAA CAGCACGTATCAAACAATCATTGCAAGCGAATGTTGGTGATGCCTGTATTGGTGGACAACTGCAGCACAAAGCTGTGTTT GGTGTTACAAATGAAGCTAATCAACAACTGAGTTATCGTTATAAGACGGTTAATTTTGCCGATGGGAAAACTATTGAGCT GCGCAGTCCAATTTGGCATGTTAAGGGTATTAGCTGCGATATTGGGCAAGATACTGTTCTTTCTGCGCGCGTTGCACCCG CAATGATTGGTCTGGGTTTACTGGCGCTGATTGATAAGCAAGATATTTTAGCCAGGCAGGATATTGATGATGCCAATCAA GATGGTATCTCCGGTAAAGCCAATCAAGTTTGGTCAATCGCGGCGCAGGGTGTCACCTTAGGCCGTTTTGGCTGGAAAGC GGGACAGCCAAGCTTAAGGCAGCAGGCAGCAGGCGCTTTTTTAGGCGATATGGGGATTACTAGTGATTTAGCTACCAATG AAAACTGTTTAAGCACGCAATCCGATTGTCTTAATGCAAAAAATGGTAATAGTCATCATAACAATACACCGGAAGAATTT GAAGTGTCAACGCGGATCCTCGACAAGGTCACTTTTTATGCTCATCATCTCGCCGTCCCGATACGCCGCAACGCCTATGC ACCAAAAGTTTTACAGGGTAAACAACTTTTTAATAAAATAGGTTGTGGACAATGCCATAGCGAAAGCTATACAACCCAAA AGAGTGAGCAGTTTAGTGAACTCTCCGAGCAAAAAATTTATCCCTACAGCGATCTGTTATTACATGATATGGGGACAGGG TTAACTGATTTTGATCAACACAGTAATGCCGTCGACGGTGAAATACCGGTTGAGTTTTTAGCGCAGGCAAATGAATGGCG AACCCCTCCTCTATGGGGAATTGGTTTGGCACAGACAGTTGATCCTAAAGCTACTTTTTTACATGATGGTCGCGCCAGAA CCATTTTGGAAGCAGTTCTCTGGCACAGTGGTGAAGCGCAGACAAGTAAATTGGCCCTATTGAAACTGGATAAGGTCGAG CGTCAGGCACTGCTTGCTTTTTTGCACGACTTATAA
Upstream 100 bases:
>100_bases CCTGCTCTGATTATTTCCGGTGACGGTGACTAATCTGCCCGCAGACAGTTTATATAAAAATTCCACCCTATCAATTTTTC TTACAATAGCGGCTCTATTT
Downstream 100 bases:
>100_bases GGAAATAAAAAAGCAGATCTGTTTTAATGCAGATCGGCTCTTTCACGCAATGACAATTACTAGCTACCTAACTTCCTGAC TTCCTAACTTCCTAACTCCC
Product: thiol oxidoreductase containing 2 cytochrome c heme-binding sites
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MINKNIFPLSVLLSCLSCNSLALDKNQHLAGGTASVDNKMASAFSMHSANMTKAKNILSFNGGNKFFEEPWAQSVGSVSS QDGLGPLFNSNACQNCHVRDGRGHASEAAKGQLGNDFSTLLIRASKSELTTAQTARIKQSLQANVGDACIGGQLQHKAVF GVTNEANQQLSYRYKTVNFADGKTIELRSPIWHVKGISCDIGQDTVLSARVAPAMIGLGLLALIDKQDILARQDIDDANQ DGISGKANQVWSIAAQGVTLGRFGWKAGQPSLRQQAAGAFLGDMGITSDLATNENCLSTQSDCLNAKNGNSHHNNTPEEF EVSTRILDKVTFYAHHLAVPIRRNAYAPKVLQGKQLFNKIGCGQCHSESYTTQKSEQFSELSEQKIYPYSDLLLHDMGTG LTDFDQHSNAVDGEIPVEFLAQANEWRTPPLWGIGLAQTVDPKATFLHDGRARTILEAVLWHSGEAQTSKLALLKLDKVE RQALLAFLHDL
Sequences:
>Translated_491_residues MINKNIFPLSVLLSCLSCNSLALDKNQHLAGGTASVDNKMASAFSMHSANMTKAKNILSFNGGNKFFEEPWAQSVGSVSS QDGLGPLFNSNACQNCHVRDGRGHASEAAKGQLGNDFSTLLIRASKSELTTAQTARIKQSLQANVGDACIGGQLQHKAVF GVTNEANQQLSYRYKTVNFADGKTIELRSPIWHVKGISCDIGQDTVLSARVAPAMIGLGLLALIDKQDILARQDIDDANQ DGISGKANQVWSIAAQGVTLGRFGWKAGQPSLRQQAAGAFLGDMGITSDLATNENCLSTQSDCLNAKNGNSHHNNTPEEF EVSTRILDKVTFYAHHLAVPIRRNAYAPKVLQGKQLFNKIGCGQCHSESYTTQKSEQFSELSEQKIYPYSDLLLHDMGTG LTDFDQHSNAVDGEIPVEFLAQANEWRTPPLWGIGLAQTVDPKATFLHDGRARTILEAVLWHSGEAQTSKLALLKLDKVE RQALLAFLHDL >Mature_491_residues MINKNIFPLSVLLSCLSCNSLALDKNQHLAGGTASVDNKMASAFSMHSANMTKAKNILSFNGGNKFFEEPWAQSVGSVSS QDGLGPLFNSNACQNCHVRDGRGHASEAAKGQLGNDFSTLLIRASKSELTTAQTARIKQSLQANVGDACIGGQLQHKAVF GVTNEANQQLSYRYKTVNFADGKTIELRSPIWHVKGISCDIGQDTVLSARVAPAMIGLGLLALIDKQDILARQDIDDANQ DGISGKANQVWSIAAQGVTLGRFGWKAGQPSLRQQAAGAFLGDMGITSDLATNENCLSTQSDCLNAKNGNSHHNNTPEEF EVSTRILDKVTFYAHHLAVPIRRNAYAPKVLQGKQLFNKIGCGQCHSESYTTQKSEQFSELSEQKIYPYSDLLLHDMGTG LTDFDQHSNAVDGEIPVEFLAQANEWRTPPLWGIGLAQTVDPKATFLHDGRARTILEAVLWHSGEAQTSKLALLKLDKVE RQALLAFLHDL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53278; Mature: 53278
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKNIFPLSVLLSCLSCNSLALDKNQHLAGGTASVDNKMASAFSMHSANMTKAKNILSF CCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEE NGGNKFFEEPWAQSVGSVSSQDGLGPLFNSNACQNCHVRDGRGHASEAAKGQLGNDFSTL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHE LIRASKSELTTAQTARIKQSLQANVGDACIGGQLQHKAVFGVTNEANQQLSYRYKTVNFA EEECCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEC DGKTIELRSPIWHVKGISCDIGQDTVLSARVAPAMIGLGLLALIDKQDILARQDIDDANQ CCCEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC DGISGKANQVWSIAAQGVTLGRFGWKAGQPSLRQQAAGAFLGDMGITSDLATNENCLSTQ CCCCCCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCH SDCLNAKNGNSHHNNTPEEFEVSTRILDKVTFYAHHLAVPIRRNAYAPKVLQGKQLFNKI HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHH GCGQCHSESYTTQKSEQFSELSEQKIYPYSDLLLHDMGTGLTDFDQHSNAVDGEIPVEFL CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHH AQANEWRTPPLWGIGLAQTVDPKATFLHDGRARTILEAVLWHSGEAQTSKLALLKLDKVE HCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHCCCCCCCHHEEEHHHHHHH RQALLAFLHDL HHHHHHHHHCC >Mature Secondary Structure MINKNIFPLSVLLSCLSCNSLALDKNQHLAGGTASVDNKMASAFSMHSANMTKAKNILSF CCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEE NGGNKFFEEPWAQSVGSVSSQDGLGPLFNSNACQNCHVRDGRGHASEAAKGQLGNDFSTL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHE LIRASKSELTTAQTARIKQSLQANVGDACIGGQLQHKAVFGVTNEANQQLSYRYKTVNFA EEECCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEC DGKTIELRSPIWHVKGISCDIGQDTVLSARVAPAMIGLGLLALIDKQDILARQDIDDANQ CCCEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC DGISGKANQVWSIAAQGVTLGRFGWKAGQPSLRQQAAGAFLGDMGITSDLATNENCLSTQ CCCCCCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCH SDCLNAKNGNSHHNNTPEEFEVSTRILDKVTFYAHHLAVPIRRNAYAPKVLQGKQLFNKI HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHH GCGQCHSESYTTQKSEQFSELSEQKIYPYSDLLLHDMGTGLTDFDQHSNAVDGEIPVEFL CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHH AQANEWRTPPLWGIGLAQTVDPKATFLHDGRARTILEAVLWHSGEAQTSKLALLKLDKVE HCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHCCCCCCCHHEEEHHHHHHH RQALLAFLHDL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA