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The map label for this gene is lppB [H]

Identifier: 119944448

GI number: 119944448

Start: 863798

End: 864655

Strand: Direct

Name: lppB [H]

Synonym: Ping_0676

Alternate gene names: 119944448

Gene position: 863798-864655 (Clockwise)

Preceding gene: 119944447

Following gene: 119944449

Centisome position: 18.94

GC content: 37.76

Gene sequence:

>858_bases
GTGAGAATTTTAGCTTTTCTGTTAGTCACTTTAGGTTTAAGTGGTTGCTCATCTTCATATGGCCCTGTTCCTGTTTCCGA
TGTAACGGGGAGCACTCGCTATCAAACCGTTAAGCAGCAAACATCGGGAATAACTGCTAAAAGTTATCAAGTGCAAAAAG
GTGATACTTTATTTTCTATTTCCTGGCGGGCGAATATTAATGTTAATGATTTGGCGAACTACAATCAATTATCTGCACCC
TATCTTATTAAGGAAGGACAAACTTTACATTTAAGCGCAGCCAAGAAGAGAAATACCATTTCTGTTAAAAAGCCAGCAGT
AAAAAGAAAGCCTCCCCCAATAAAAGACAAAAAAATATCAAACACAGATCAAGTTTATAGCAAAGAAAGTCAACCTGCTA
TTGTACAAAAAAATCCAATCACCTATTCTTCCTCTACGAGAAAAACCGATGTAAAAATAACTAAGCCTAAAAAATTAAAT
GTTAAAATAAGCCATTGGCAATGGCCCGCAAAAGGAAAATTGACAAAAACTTTTGCTTCCTCTGAAACAGGAATGAAAGG
GCTCAGTCTCTCAAATCAGCGTGGAACGCCTATCTACACGGCAGCGTCCGGTGAGGTTGTTTACGCAGGTGCGGGTCTTC
GTGGTTTTGGTAATTTAATTATCATCAAACATAATGATGATTATTTAAGTGCTTATGCACATAATGAGCAGCTACTAATA
AGCGAAAAACAACAGGTAAAAGCAGGCCAAAAAATAGCAACAATGGGTGATAGTGGTACAGATAGTGTGAAACTGCACTT
TGAAATCCGTTATCAAGGAAAGTCTATCGATCCCATGCGTTATTTACCTAAACGCTAA

Upstream 100 bases:

>100_bases
AGGGAATGCGATCTAATTCTGGCAAACAGGGTTATTTTAAAAGTTGGCTGATATTTTTTTTAGCGCTCTTTTATACCCTG
CTACTGAGAACTAATTACCG

Downstream 100 bases:

>100_bases
TAGTTTACTTAATTAATTATCATTAGTTCATGAATGGAATAGCTTTTTTATGGGCAGATATCTATAAATCTTAACATAAA
ATAACAGGTTTTTTGTAATA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRILAFLLVTLGLSGCSSSYGPVPVSDVTGSTRYQTVKQQTSGITAKSYQVQKGDTLFSISWRANINVNDLANYNQLSAP
YLIKEGQTLHLSAAKKRNTISVKKPAVKRKPPPIKDKKISNTDQVYSKESQPAIVQKNPITYSSSTRKTDVKITKPKKLN
VKISHWQWPAKGKLTKTFASSETGMKGLSLSNQRGTPIYTAASGEVVYAGAGLRGFGNLIIIKHNDDYLSAYAHNEQLLI
SEKQQVKAGQKIATMGDSGTDSVKLHFEIRYQGKSIDPMRYLPKR

Sequences:

>Translated_285_residues
MRILAFLLVTLGLSGCSSSYGPVPVSDVTGSTRYQTVKQQTSGITAKSYQVQKGDTLFSISWRANINVNDLANYNQLSAP
YLIKEGQTLHLSAAKKRNTISVKKPAVKRKPPPIKDKKISNTDQVYSKESQPAIVQKNPITYSSSTRKTDVKITKPKKLN
VKISHWQWPAKGKLTKTFASSETGMKGLSLSNQRGTPIYTAASGEVVYAGAGLRGFGNLIIIKHNDDYLSAYAHNEQLLI
SEKQQVKAGQKIATMGDSGTDSVKLHFEIRYQGKSIDPMRYLPKR
>Mature_285_residues
MRILAFLLVTLGLSGCSSSYGPVPVSDVTGSTRYQTVKQQTSGITAKSYQVQKGDTLFSISWRANINVNDLANYNQLSAP
YLIKEGQTLHLSAAKKRNTISVKKPAVKRKPPPIKDKKISNTDQVYSKESQPAIVQKNPITYSSSTRKTDVKITKPKKLN
VKISHWQWPAKGKLTKTFASSETGMKGLSLSNQRGTPIYTAASGEVVYAGAGLRGFGNLIIIKHNDDYLSAYAHNEQLLI
SEKQQVKAGQKIATMGDSGTDSVKLHFEIRYQGKSIDPMRYLPKR

Specific function: May be a virulence determinant [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1789099, Length=300, Percent_Identity=39, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI87082174, Length=284, Percent_Identity=38.3802816901408, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI87082297, Length=121, Percent_Identity=33.0578512396694, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 31423; Mature: 31423

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILAFLLVTLGLSGCSSSYGPVPVSDVTGSTRYQTVKQQTSGITAKSYQVQKGDTLFSI
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEEE
SWRANINVNDLANYNQLSAPYLIKEGQTLHLSAAKKRNTISVKKPAVKRKPPPIKDKKIS
EEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
NTDQVYSKESQPAIVQKNPITYSSSTRKTDVKITKPKKLNVKISHWQWPAKGKLTKTFAS
CCHHHHCCCCCCEEEECCCEEECCCCCEEEEEEECCCEEEEEEEEEECCCCCCEEEEECC
SETGMKGLSLSNQRGTPIYTAASGEVVYAGAGLRGFGNLIIIKHNDDYLSAYAHNEQLLI
CCCCCCCCEECCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCEEEE
SEKQQVKAGQKIATMGDSGTDSVKLHFEIRYQGKSIDPMRYLPKR
CCHHHHHCCCEEEECCCCCCCEEEEEEEEEECCCCCCHHHCCCCC
>Mature Secondary Structure
MRILAFLLVTLGLSGCSSSYGPVPVSDVTGSTRYQTVKQQTSGITAKSYQVQKGDTLFSI
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEEE
SWRANINVNDLANYNQLSAPYLIKEGQTLHLSAAKKRNTISVKKPAVKRKPPPIKDKKIS
EEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
NTDQVYSKESQPAIVQKNPITYSSSTRKTDVKITKPKKLNVKISHWQWPAKGKLTKTFAS
CCHHHHCCCCCCEEEECCCEEECCCCCEEEEEEECCCEEEEEEEEEECCCCCCEEEEECC
SETGMKGLSLSNQRGTPIYTAASGEVVYAGAGLRGFGNLIIIKHNDDYLSAYAHNEQLLI
CCCCCCCCEECCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCEEEE
SEKQQVKAGQKIATMGDSGTDSVKLHFEIRYQGKSIDPMRYLPKR
CCHHHHHCCCEEEECCCCCCCEEEEEEEEEECCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]