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The map label for this gene is yiaN [C]

Identifier: 119944418

GI number: 119944418

Start: 831631

End: 832935

Strand: Reverse

Name: yiaN [C]

Synonym: Ping_0646

Alternate gene names: 119944418

Gene position: 832935-831631 (Counterclockwise)

Preceding gene: 119944419

Following gene: 119944409

Centisome position: 18.27

GC content: 41.99

Gene sequence:

>1305_bases
ATGCTAATTACATTAATTGGATTCACAGCGTTAATGGTATTGATTTTACTGAGAATGCCCGTTGCTTTTGCAATGGGGAT
TGTTGGTTTCATTGGTTATTCAGCGTTAGGCGATTGGAATTTTGGCGGGGCACTGTCAATCAGTGCTAACCGTTTAATAG
ATACCTCTCAATCTTATGGTCTTTCTGTTATCCCCCTGTTTATTTTAATGGGGAATTTTATTACCAAAGCCGGATTATCC
CAGGAACTGTATCGTGCTTGTTATGCCTTTTTAGGACACAAGAGAGGCGGTCTTGCAATGGCGACTATTGCCGCGTGTGG
GGGGTTTTCTGCAATATCAGGATCAAGCCTTGCGACAGCTGCGACAATGGCAAAAGTTGCTATGCCACCGATGCGTAAAT
ACGGTTATTCCGATGGTTTGGCTTCCGCATCAATTGCCGCTGGCGGTACGTTAGGAATATTAATTCCACCCAGCGTCATT
TTAATTATTTACGGTGTGATGACCGAACAAAGCATAAGAGATTTATTTGCAGCAGGCTTTATTCCCGGTCTATTAGGTAT
ACTTTTTTATATGCTGGCAATACGTTTTGTTGTTTGGCGTAATCCCAAGGCTGGGCCTTGTGGAGATAAGATGGGTAAAA
GTGAAAGATGGAATGCGGTTCGCTCCGTGGCGTCTATTTTAGGTTTGTTTATTGTTGTTATGGGCGGAATTTATGGCGGT
ATATTTACACCGACGGAAGCCGCGGGAATTGGTGCCGGGGGCGCGTTCGTTATTGCGCTTTATCGCCGGTCATTAACCTT
TGTGATTCTGCGCGATATCCTTATTGAAACTGCCCGTACAACTACCATGCTGTTTGGTGTCATTATTGGGGCATTAATAT
ATTCAAATTTTGTTAATCGCGCCGGCTTGCCCGCTGAACTTGTTAATCTAATTACCTCTATTGGTGCAGAGCCGATTATG
GTTATGCTGGCAATACTGGGTATTTATATTTTGTTAGGGACAGTATTTGAAAGTTTATCGATGCTGTTATTAACCATCCC
GGTGTTTTATCCACTGGTGCAAGCAATGGGATTTGACCTTGTTTGGTTTGGTATTGTGGTGGTGGTTGTGACTGAAATCA
GTTTGATTACTCCACCCGTAGGATTAAATATATTTGTGTTAAGCAGTGTGATTAAAGACATTAAAACCAGTACCATTTTT
AAAGGCGTAACCCCCTTTTGGTGTGCTGATATTATTCGTCTTTTATTATTACTTTTTATTCCTGCTTTATCACTTTGGTT
ACCACAGATGCTGTATAGCGCTTAG

Upstream 100 bases:

>100_bases
CTTACTTCCTTGCGTTAACATGTTGGTTAACAGCTATTACCTCGCTTGTTTTGGTTTTAACTGAAACACTTAATAAACAA
TATAAAAACCAGGGATAAGC

Downstream 100 bases:

>100_bases
CTTAATTAAGAAGTGAAAGATCTCCTTTTTTAACTTTAATTTAAAGAAGAGTGATATTTAAAATATCACTCTTCTTTTTA
TAACTCTGCGGAAAATTTTT

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLITLIGFTALMVLILLRMPVAFAMGIVGFIGYSALGDWNFGGALSISANRLIDTSQSYGLSVIPLFILMGNFITKAGLS
QELYRACYAFLGHKRGGLAMATIAACGGFSAISGSSLATAATMAKVAMPPMRKYGYSDGLASASIAAGGTLGILIPPSVI
LIIYGVMTEQSIRDLFAAGFIPGLLGILFYMLAIRFVVWRNPKAGPCGDKMGKSERWNAVRSVASILGLFIVVMGGIYGG
IFTPTEAAGIGAGGAFVIALYRRSLTFVILRDILIETARTTTMLFGVIIGALIYSNFVNRAGLPAELVNLITSIGAEPIM
VMLAILGIYILLGTVFESLSMLLLTIPVFYPLVQAMGFDLVWFGIVVVVVTEISLITPPVGLNIFVLSSVIKDIKTSTIF
KGVTPFWCADIIRLLLLLFIPALSLWLPQMLYSA

Sequences:

>Translated_434_residues
MLITLIGFTALMVLILLRMPVAFAMGIVGFIGYSALGDWNFGGALSISANRLIDTSQSYGLSVIPLFILMGNFITKAGLS
QELYRACYAFLGHKRGGLAMATIAACGGFSAISGSSLATAATMAKVAMPPMRKYGYSDGLASASIAAGGTLGILIPPSVI
LIIYGVMTEQSIRDLFAAGFIPGLLGILFYMLAIRFVVWRNPKAGPCGDKMGKSERWNAVRSVASILGLFIVVMGGIYGG
IFTPTEAAGIGAGGAFVIALYRRSLTFVILRDILIETARTTTMLFGVIIGALIYSNFVNRAGLPAELVNLITSIGAEPIM
VMLAILGIYILLGTVFESLSMLLLTIPVFYPLVQAMGFDLVWFGIVVVVVTEISLITPPVGLNIFVLSSVIKDIKTSTIF
KGVTPFWCADIIRLLLLLFIPALSLWLPQMLYSA
>Mature_434_residues
MLITLIGFTALMVLILLRMPVAFAMGIVGFIGYSALGDWNFGGALSISANRLIDTSQSYGLSVIPLFILMGNFITKAGLS
QELYRACYAFLGHKRGGLAMATIAACGGFSAISGSSLATAATMAKVAMPPMRKYGYSDGLASASIAAGGTLGILIPPSVI
LIIYGVMTEQSIRDLFAAGFIPGLLGILFYMLAIRFVVWRNPKAGPCGDKMGKSERWNAVRSVASILGLFIVVMGGIYGG
IFTPTEAAGIGAGGAFVIALYRRSLTFVILRDILIETARTTTMLFGVIIGALIYSNFVNRAGLPAELVNLITSIGAEPIM
VMLAILGIYILLGTVFESLSMLLLTIPVFYPLVQAMGFDLVWFGIVVVVVTEISLITPPVGLNIFVLSSVIKDIKTSTIF
KGVTPFWCADIIRLLLLLFIPALSLWLPQMLYSA

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=407, Percent_Identity=31.6953316953317, Blast_Score=152, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46248; Mature: 46248

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITLIGFTALMVLILLRMPVAFAMGIVGFIGYSALGDWNFGGALSISANRLIDTSQSYG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCC
LSVIPLFILMGNFITKAGLSQELYRACYAFLGHKRGGLAMATIAACGGFSAISGSSLATA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCHHHHH
ATMAKVAMPPMRKYGYSDGLASASIAAGGTLGILIPPSVILIIYGVMTEQSIRDLFAAGF
HHHHHHHCCHHHHCCCCCCCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IPGLLGILFYMLAIRFVVWRNPKAGPCGDKMGKSERWNAVRSVASILGLFIVVMGGIYGG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IFTPTEAAGIGAGGAFVIALYRRSLTFVILRDILIETARTTTMLFGVIIGALIYSNFVNR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGLPAELVNLITSIGAEPIMVMLAILGIYILLGTVFESLSMLLLTIPVFYPLVQAMGFDL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VWFGIVVVVVTEISLITPPVGLNIFVLSSVIKDIKTSTIFKGVTPFWCADIIRLLLLLFI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PALSLWLPQMLYSA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLITLIGFTALMVLILLRMPVAFAMGIVGFIGYSALGDWNFGGALSISANRLIDTSQSYG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCC
LSVIPLFILMGNFITKAGLSQELYRACYAFLGHKRGGLAMATIAACGGFSAISGSSLATA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCHHHHH
ATMAKVAMPPMRKYGYSDGLASASIAAGGTLGILIPPSVILIIYGVMTEQSIRDLFAAGF
HHHHHHHCCHHHHCCCCCCCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IPGLLGILFYMLAIRFVVWRNPKAGPCGDKMGKSERWNAVRSVASILGLFIVVMGGIYGG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IFTPTEAAGIGAGGAFVIALYRRSLTFVILRDILIETARTTTMLFGVIIGALIYSNFVNR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGLPAELVNLITSIGAEPIMVMLAILGIYILLGTVFESLSMLLLTIPVFYPLVQAMGFDL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VWFGIVVVVVTEISLITPPVGLNIFVLSSVIKDIKTSTIFKGVTPFWCADIIRLLLLLFI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PALSLWLPQMLYSA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]