| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944407
Identifier: 119944407
GI number: 119944407
Start: 816652
End: 818448
Strand: Reverse
Name: 119944407
Synonym: Ping_0635
Alternate gene names: NA
Gene position: 818448-816652 (Counterclockwise)
Preceding gene: 119944408
Following gene: 119944403
Centisome position: 17.95
GC content: 39.62
Gene sequence:
>1797_bases ATGCAAAGAGATTTTATGAAACTTAATATTTTAACCTCCGTTATTTTATCAACGACACTTATCGCTTGTTCAGCGACTCC ACCGCAAACTAATCTTATTGAAAAAAAACAAACTATTCAATTAGTTGAGCAAGGTCGTTATCACTCGAACATCTTTGATG AAAGTGCTGCTGAGATTGTGACTTACGACAAAAAAACGCAAAATACCTTTGTGGTTAATGCGGAGTCGGGCAAAGTCGAT GTTGTTCGCAGTGCTGATATTAATAAACCAACATTACTGAGCAGCTTAAATATTGGTGCTGATATACAAAAACATCTTAA TAAACAAGCAGGTGCCGCTAATAGTGTTGATGTGTCTGATGGATTGCTTGCTGTCGCCATTGAAGCCGAAAATAAAACAG ATACAGGCTGGGTAGCCTTTTATGACACCCAAAACCTGACATATATTGATGCTGTTTATGTTGGGGCTCTCCCTGATATG GTGACCTTCAGCGCAAATGGTAAACAGTTAGTGGTGGCTCTTGAAGGTGAACCTTCGGATAAAAATTATGCGCTAGATCC CGTGGGTGAAATAGCAGTCATTGATATCGACTGGCAAAAAAATACATTAAAAACGACGGTGACACGGATTAATTTCCATG AATTTAATCAGGGAGGTACGCGATTTAATGAATTACCCGAACAGTTGGTATTAAATGGTTTTCAAGCAAGCGTGGAACAG GATTTAGAGCCCGAGTATATTGCAATAAATAAAAGCTCAACCAAGGCCTATGTGAGTTTGCAGGAAAATAACGCCATTGC AGTAATTAATCTGGCTGATAAGTCTATTGAAAAAATAATGGCATTAGGTTTTAAAGATCATTTACAATCGGGTAATGAGT TGGATGGTAATAACAAAGACAAACAAGCCTTGCTTAAGAATGAACCTGCCCTAGGCATGTATCAGCCGGATTCCATTGCC GTGGTCACTATTGGCGGAACTGATTATGTACTGACAGCGAACGAAGGAGATGATCGCAGTGATTGGCTAACTGATTTATC TATAGCTGATTGTGAAGCGGGTGATTATTATTTTAATTTGGAAGACAAAGCCTGTGGCGATGATATTAAATTAAAAGATG CCTTTGACGGTGGTATTTATAAACCTTCGGATCAGCAAAACAGGTTGGATTTAAGCAATTTTCAGCAAGGGGGTATTTAC CAAGATGCGGTTAAAACGCTTAAATTTTCTCACTCTGCCACTAAACAATTTGGCGACTTAAATGCTGATGGAAAAATTGA TCGCATACTGACCTTTGGTGGACGTTCATTTTCCATTTGGAATGTCGATGCAGAGCAATTGATTTTTGATTCAGGTAGTG ATTTTGAACGCATTACCGCACAGAAATACGGTGCTAATTTCAACCAAACCCACAGTAAAAACAAAGCTGAGAATCGTAGT GGCAAAAAGGGCCCTGAGCCTGAAGCCTTAACGACCGGTATTATTGATGGGATAACTTATGCCTTTATTGGCCTTGAGCG AATGGGCGGCATTATGGTTTATAATATTTCTGATCCTGCTAATGCACAGTTTGTACAGTATCTTAATAACCGGGATTTGA GCGTGGATCCCAAAGATAATATTGCAAAAGATGCCAATCACGTAAAGACCTATAACGTCGATGCCGGTGATTTAGGACCC GAAGGTTTCCGTTTTGTGGCCGCTAAAGACAGCCCCACTAACAACCCTATTCTTATTGTCGGTAATGAAGTCAGCGGTAC AACAAGCTTCTATCGTATTGATTCATTAGCGAAATAA
Upstream 100 bases:
>100_bases GTAACTGCTTGCGCCCCATAAACGTTGACTCTATTAATGTTATTTTCATCTGTCTGTCATATTAGTCAGGTATAAAAGTG GCTAACTTCTAATTCCAGCC
Downstream 100 bases:
>100_bases AAATGATATAAGGTAAGTGCCTGCGCTTACCTTATTTATGCAGTTATTTGTTATCCAATCGACTGATGAATCAATTCCAG CAAAGGTGCGGGTAATTTTA
Product: transcriptional regulator, MerR family protein
Products: NA
Alternate protein names: Alkaline Phosphatase-Like Protein; 5-Nucleotidase Domain Protein; MerR Family Transcriptional Regulator; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase; Transcriptional Regulator MerR Family Protein; CHU Large Protein; Metallophosphoesterase; PEP-CTERM Exosortase Interaction Domain Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; 5-Nucleotidase C-Terminal Domain Protein; Ig Domain Domain Protein; Collagen Triple Helix Repeat Protein; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Ig Family Protein; Atypical Alkaline Phosphatase With Phytase-Like Insertion
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK
Sequences:
>Translated_598_residues MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK >Mature_598_residues MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIVTYDKKTQNTFVVNAESGKVD VVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSDGLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDM VTFSANGKQLVVALEGEPSDKNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKDKQALLKNEPALGMYQPDSIA VVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNLEDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIY QDAVKTLKFSHSATKQFGDLNADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDNIAKDANHVKTYNVDAGDLGP EGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65529; Mature: 65529
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIV CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEE TYDKKTQNTFVVNAESGKVDVVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSD EECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC GLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDMVTFSANGKQLVVALEGEPSD CEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC KNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ CCEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCHHHHHHCCHHHHHHC DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKD CCCCCEEEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCH KQALLKNEPALGMYQPDSIAVVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNL HHHHHHCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCEEECCCCCCEEEEC EDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIYQDAVKTLKFSHSATKQFGDL CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCC NADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS CCCCCEEEEEEECCCEEEEEECCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCC IAKDANHVKTYNVDAGDLGPEGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK HHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure MQRDFMKLNILTSVILSTTLIACSATPPQTNLIEKKQTIQLVEQGRYHSNIFDESAAEIV CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEE TYDKKTQNTFVVNAESGKVDVVRSADINKPTLLSSLNIGADIQKHLNKQAGAANSVDVSD EECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC GLLAVAIEAENKTDTGWVAFYDTQNLTYIDAVYVGALPDMVTFSANGKQLVVALEGEPSD CEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC KNYALDPVGEIAVIDIDWQKNTLKTTVTRINFHEFNQGGTRFNELPEQLVLNGFQASVEQ CCEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHCHHHHHHCCHHHHHHC DLEPEYIAINKSSTKAYVSLQENNAIAVINLADKSIEKIMALGFKDHLQSGNELDGNNKD CCCCCEEEEECCCCEEEEEEECCCEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCH KQALLKNEPALGMYQPDSIAVVTIGGTDYVLTANEGDDRSDWLTDLSIADCEAGDYYFNL HHHHHHCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCEEECCCCCCEEEEC EDKACGDDIKLKDAFDGGIYKPSDQQNRLDLSNFQQGGIYQDAVKTLKFSHSATKQFGDL CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCC NADGKIDRILTFGGRSFSIWNVDAEQLIFDSGSDFERITAQKYGANFNQTHSKNKAENRS CCCCCEEEEEEECCCEEEEEECCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GKKGPEPEALTTGIIDGITYAFIGLERMGGIMVYNISDPANAQFVQYLNNRDLSVDPKDN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCC IAKDANHVKTYNVDAGDLGPEGFRFVAAKDSPTNNPILIVGNEVSGTTSFYRIDSLAK HHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA