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The map label for this gene is nsrR [H]

Identifier: 119944403

GI number: 119944403

Start: 812385

End: 812828

Strand: Reverse

Name: nsrR [H]

Synonym: Ping_0631

Alternate gene names: 119944403

Gene position: 812828-812385 (Counterclockwise)

Preceding gene: 119944407

Following gene: 119944402

Centisome position: 17.83

GC content: 36.94

Gene sequence:

>444_bases
ATGCACATTACCCGTTATACCGATTATTCATTGCGCATATTGATTTATTTAGCCATCAATAACGATCAGCTAAGTACCAT
TAATGAGATAGCCCAAAGCTATCACATTTCCAAAAATCACCTGATGAAGATTGTTCAACAACTTAATGTTAAAGGGTATT
TATTAGCGATTCGCGGAAAAAATGGCGGCATTAAATTAAACCGCGATCCTGGTGATATTAATATTGGCAGCCTGGTACGG
GAAATGGAAGACAGCAACAAATTAGTAGAATGCTTTAGTGATAATAACCACTGCGTGATCAGCCCAAGTTGTCAATTAAA
AGGTATTTTTGCCGAAGCGCAAGAGAGCTTTTTTAACACTCTGGACAAATATACTTTGGCTGATTTAGTGGCTGTGAAGA
GACAAACCGAACTAGGCGAATTACTGGATATTAATGTTTTATAA

Upstream 100 bases:

>100_bases
AATGATTGTGTGACTCTTTTTATTGGAAAACTATTTTACAATAACCCTAAAAGATGTAAAATAAATACATCTTTTATTAA
TACCTGACAAGGTACTTACA

Downstream 100 bases:

>100_bases
CTTGAAATTATTCAGATATAAACCGAAAAATTAACTGTTAGATGACATTGAGACTTTCATTATGATCAATATTTCAAACC
CTAAAAGTAATCCTAAACCC

Product: transcriptional regulator, BadM/Rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MHITRYTDYSLRILIYLAINNDQLSTINEIAQSYHISKNHLMKIVQQLNVKGYLLAIRGKNGGIKLNRDPGDINIGSLVR
EMEDSNKLVECFSDNNHCVISPSCQLKGIFAEAQESFFNTLDKYTLADLVAVKRQTELGELLDINVL

Sequences:

>Translated_147_residues
MHITRYTDYSLRILIYLAINNDQLSTINEIAQSYHISKNHLMKIVQQLNVKGYLLAIRGKNGGIKLNRDPGDINIGSLVR
EMEDSNKLVECFSDNNHCVISPSCQLKGIFAEAQESFFNTLDKYTLADLVAVKRQTELGELLDINVL
>Mature_147_residues
MHITRYTDYSLRILIYLAINNDQLSTINEIAQSYHISKNHLMKIVQQLNVKGYLLAIRGKNGGIKLNRDPGDINIGSLVR
EMEDSNKLVECFSDNNHCVISPSCQLKGIFAEAQESFFNTLDKYTLADLVAVKRQTELGELLDINVL

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=131, Percent_Identity=46.5648854961832, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16643; Mature: 16643

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITRYTDYSLRILIYLAINNDQLSTINEIAQSYHISKNHLMKIVQQLNVKGYLLAIRGK
CCCEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECC
NGGIKLNRDPGDINIGSLVREMEDSNKLVECFSDNNHCVISPSCQLKGIFAEAQESFFNT
CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHH
LDKYTLADLVAVKRQTELGELLDINVL
HHHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MHITRYTDYSLRILIYLAINNDQLSTINEIAQSYHISKNHLMKIVQQLNVKGYLLAIRGK
CCCEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECC
NGGIKLNRDPGDINIGSLVREMEDSNKLVECFSDNNHCVISPSCQLKGIFAEAQESFFNT
CCCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHH
LDKYTLADLVAVKRQTELGELLDINVL
HHHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA