| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944402
Identifier: 119944402
GI number: 119944402
Start: 811139
End: 812323
Strand: Reverse
Name: 119944402
Synonym: Ping_0630
Alternate gene names: NA
Gene position: 812323-811139 (Counterclockwise)
Preceding gene: 119944403
Following gene: 119944400
Centisome position: 17.82
GC content: 42.19
Gene sequence:
>1185_bases ATGATCAATATTTCAAACCCTAAAAGTAATCCTAAACCCGACATGGCATTTTTTGAATTCGCCTTTCGCCCCTTTTTTTT ACTTGCTTCCCTGTTTAGCATTTTCAGTTTGTTAGTATGGAATGGTATATTAACCGGAAATATTGCTCTGAATCTTTATG GCGGTCCCCTGTGGTGGCACATGCATGAAATGTTATTTGCTTTTGTGGCCGCTATTATTGTTGGATTCTTATTAACTGCG GTACAAAACTGGACTGGAGTACGGGGTTTACATGGTAAAGGATTGTTGCTTATCGTTGCTCTCTGGCTAACCGCTAGAGT ATTATTTTTCTTTCCCAACAGCCTTTCTCACTCGCTTATCGCTATTGTGGATATCGCCTTTCTGCCTGTGGCGGCGATAA TATTAGCTTACCCGATTGTCAGCGTTAAGCTCTGGCGCAACCTTCTGTTTATCCCAATATTATTAATAATGGCCGCCACT AATGCTATGATGCATTACAGTATCATCTCTCAAAATCTGCAATTAATGGGAACAGCCAGTAGTGCAATGATTTTACTGGT GACCTTGATGATGTGTATTATGGGCGGCAGAGTATTTCCCATGTTCACCGCCAATGGAACAAAAACGGCCCGGGTAATGT CTATCGCTTGGCTTGAGAAACTTGTTATAGGCAGCACGTTACTCGCTGTATTAACCTCCTTTAATTTTATTCCACTACCT TCAATTTTGATCGCAGTTATCTTTTTTGTCGCAGCAAGTGCTAATGCACTACGCGTTTTTCGTTGGAAAAGTTGGGTAAC CTTCAAAACACCTTTAGTTTGGTCTCTGCATCTAAGCTATTGGTGCATTGCGATCGGCCTGTTGATGATTGGCTTATCAG AAATAACGGCATCGGTCAGCCACTCACAGGCGATTCATACGTTAACGATTGGCGCTATGGCAAGCATGATTCTGGCGATG ATTTCACGCGTTTCATTAGGTCATACCGGCAGAAATATGGTTGTTGGTAAAGTGATGACAATGGCTTTTATCGCTCTAAT TTTGGCCTTTATTATGCGCGTTTTTGGCAGTTATTGGGTCGCTAACTATAGCCACGTTATTTCCATCGCCATTGGTTTTT GGGTGATTGGTTACGGCTGCTTTGTGGCGCTCTATTTCCCAATTTTAACTAAACCTCGGCTGTGA
Upstream 100 bases:
>100_bases ACCGAACTAGGCGAATTACTGGATATTAATGTTTTATAACTTGAAATTATTCAGATATAAACCGAAAAATTAACTGTTAG ATGACATTGAGACTTTCATT
Downstream 100 bases:
>100_bases AATTTATTATTATCATGTCCTACGCAACGTTTTAAATGCAGATTAAATATACAGCTGTAATGAGTTAAAACCGTAAGCTA AAAAACTGCGCTGCAAGGCG
Product: Heme/copper membrane protein of NnrS family protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; NnrS Transmembrane Protein; Heme-Cu Membrane Protein; Transmembrane Protein; NnrS Dehydrogenase; Heme-Cu-Containing Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; ATP Synthase F0 A Subunit; Nitrite And/Or Nitric Oxide Reductase; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MINISNPKSNPKPDMAFFEFAFRPFFLLASLFSIFSLLVWNGILTGNIALNLYGGPLWWHMHEMLFAFVAAIIVGFLLTA VQNWTGVRGLHGKGLLLIVALWLTARVLFFFPNSLSHSLIAIVDIAFLPVAAIILAYPIVSVKLWRNLLFIPILLIMAAT NAMMHYSIISQNLQLMGTASSAMILLVTLMMCIMGGRVFPMFTANGTKTARVMSIAWLEKLVIGSTLLAVLTSFNFIPLP SILIAVIFFVAASANALRVFRWKSWVTFKTPLVWSLHLSYWCIAIGLLMIGLSEITASVSHSQAIHTLTIGAMASMILAM ISRVSLGHTGRNMVVGKVMTMAFIALILAFIMRVFGSYWVANYSHVISIAIGFWVIGYGCFVALYFPILTKPRL
Sequences:
>Translated_394_residues MINISNPKSNPKPDMAFFEFAFRPFFLLASLFSIFSLLVWNGILTGNIALNLYGGPLWWHMHEMLFAFVAAIIVGFLLTA VQNWTGVRGLHGKGLLLIVALWLTARVLFFFPNSLSHSLIAIVDIAFLPVAAIILAYPIVSVKLWRNLLFIPILLIMAAT NAMMHYSIISQNLQLMGTASSAMILLVTLMMCIMGGRVFPMFTANGTKTARVMSIAWLEKLVIGSTLLAVLTSFNFIPLP SILIAVIFFVAASANALRVFRWKSWVTFKTPLVWSLHLSYWCIAIGLLMIGLSEITASVSHSQAIHTLTIGAMASMILAM ISRVSLGHTGRNMVVGKVMTMAFIALILAFIMRVFGSYWVANYSHVISIAIGFWVIGYGCFVALYFPILTKPRL >Mature_394_residues MINISNPKSNPKPDMAFFEFAFRPFFLLASLFSIFSLLVWNGILTGNIALNLYGGPLWWHMHEMLFAFVAAIIVGFLLTA VQNWTGVRGLHGKGLLLIVALWLTARVLFFFPNSLSHSLIAIVDIAFLPVAAIILAYPIVSVKLWRNLLFIPILLIMAAT NAMMHYSIISQNLQLMGTASSAMILLVTLMMCIMGGRVFPMFTANGTKTARVMSIAWLEKLVIGSTLLAVLTSFNFIPLP SILIAVIFFVAASANALRVFRWKSWVTFKTPLVWSLHLSYWCIAIGLLMIGLSEITASVSHSQAIHTLTIGAMASMILAM ISRVSLGHTGRNMVVGKVMTMAFIALILAFIMRVFGSYWVANYSHVISIAIGFWVIGYGCFVALYFPILTKPRL
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43593; Mature: 43593
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINISNPKSNPKPDMAFFEFAFRPFFLLASLFSIFSLLVWNGILTGNIALNLYGGPLWWH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCHHHHH MHEMLFAFVAAIIVGFLLTAVQNWTGVRGLHGKGLLLIVALWLTARVLFFFPNSLSHSLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH AIVDIAFLPVAAIILAYPIVSVKLWRNLLFIPILLIMAATNAMMHYSIISQNLQLMGTAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCH SAMILLVTLMMCIMGGRVFPMFTANGTKTARVMSIAWLEKLVIGSTLLAVLTSFNFIPLP HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SILIAVIFFVAASANALRVFRWKSWVTFKTPLVWSLHLSYWCIAIGLLMIGLSEITASVS HHHHHHHHHHHCCCCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSQAIHTLTIGAMASMILAMISRVSLGHTGRNMVVGKVMTMAFIALILAFIMRVFGSYWV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANYSHVISIAIGFWVIGYGCFVALYFPILTKPRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINISNPKSNPKPDMAFFEFAFRPFFLLASLFSIFSLLVWNGILTGNIALNLYGGPLWWH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCHHHHH MHEMLFAFVAAIIVGFLLTAVQNWTGVRGLHGKGLLLIVALWLTARVLFFFPNSLSHSLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH AIVDIAFLPVAAIILAYPIVSVKLWRNLLFIPILLIMAATNAMMHYSIISQNLQLMGTAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCH SAMILLVTLMMCIMGGRVFPMFTANGTKTARVMSIAWLEKLVIGSTLLAVLTSFNFIPLP HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SILIAVIFFVAASANALRVFRWKSWVTFKTPLVWSLHLSYWCIAIGLLMIGLSEITASVS HHHHHHHHHHHCCCCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSQAIHTLTIGAMASMILAMISRVSLGHTGRNMVVGKVMTMAFIALILAFIMRVFGSYWV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANYSHVISIAIGFWVIGYGCFVALYFPILTKPRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA