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The map label for this gene is pilA [H]

Identifier: 119944251

GI number: 119944251

Start: 601668

End: 602087

Strand: Direct

Name: pilA [H]

Synonym: Ping_0475

Alternate gene names: 119944251

Gene position: 601668-602087 (Clockwise)

Preceding gene: 119944250

Following gene: 119944252

Centisome position: 13.2

GC content: 41.43

Gene sequence:

>420_bases
ATGGTAAAAAGTCAATACATGAAAAAAGCACAGCAAGGTTTTACATTGATTGAGCTGTTAATTGTTATCGCGATTATCGG
TATTTTGGCAGCAGTTGCGTTGCCTGCTTATCAGAACTATGTACAAAAATCAGAGGTAAGCGCGGGATTAGCTGAAATTA
CGGGGGGGAAACCTGGAATAGTTCTTCAAGTTAGCGGGGGTAATGGGGCTAGTATTTCAGCCGCGACTATAGGTCTTTCA
ACTCCGACTCAAACTTGTACCATCACTGCCGATAACACTGGGGTTACATGTACATACCTGAATACAGCTATCAATACCGG
TACTTCTGCTCTTAAATTAGAGTACTCAGCTGCTTCAGGAACATTTTCATGTGACGCAACTAATATAGATGACAATTTAC
TGCCTAAAGGTTGTTCGTAG

Upstream 100 bases:

>100_bases
TTTATTATGTTTTTTAATTTCTTTCATTAATGCAAGAAAAGATTAATAAAAAAAAGGTAAAAATTTAAATAAATAATGTT
TAATTATTAAGGAATATTCC

Downstream 100 bases:

>100_bases
TCTATAATTAATGGCAACCCATAATATCAGCGGCTAGGCTTTAAGCCTGGCCCTTTTTTTATCCTTTTTTGATAAGCTCG
AGTACTTAACCTTCAATAAT

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVKSQYMKKAQQGFTLIELLIVIAIIGILAAVALPAYQNYVQKSEVSAGLAEITGGKPGIVLQVSGGNGASISAATIGLS
TPTQTCTITADNTGVTCTYLNTAINTGTSALKLEYSAASGTFSCDATNIDDNLLPKGCS

Sequences:

>Translated_139_residues
MVKSQYMKKAQQGFTLIELLIVIAIIGILAAVALPAYQNYVQKSEVSAGLAEITGGKPGIVLQVSGGNGASISAATIGLS
TPTQTCTITADNTGVTCTYLNTAINTGTSALKLEYSAASGTFSCDATNIDDNLLPKGCS
>Mature_139_residues
MVKSQYMKKAQQGFTLIELLIVIAIIGILAAVALPAYQNYVQKSEVSAGLAEITGGKPGIVLQVSGGNGASISAATIGLS
TPTQTCTITADNTGVTCTYLNTAINTGTSALKLEYSAASGTFSCDATNIDDNLLPKGCS

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 14166; Mature: 14166

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQYMKKAQQGFTLIELLIVIAIIGILAAVALPAYQNYVQKSEVSAGLAEITGGKPGI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCE
VLQVSGGNGASISAATIGLSTPTQTCTITADNTGVTCTYLNTAINTGTSALKLEYSAASG
EEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEECHHCCCCCEEEEEECCCCC
TFSCDATNIDDNLLPKGCS
EEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKSQYMKKAQQGFTLIELLIVIAIIGILAAVALPAYQNYVQKSEVSAGLAEITGGKPGI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCE
VLQVSGGNGASISAATIGLSTPTQTCTITADNTGVTCTYLNTAINTGTSALKLEYSAASG
EEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEECHHCCCCCEEEEEECCCCC
TFSCDATNIDDNLLPKGCS
EEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]