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The map label for this gene is 119944250

Identifier: 119944250

GI number: 119944250

Start: 599980

End: 601422

Strand: Direct

Name: 119944250

Synonym: Ping_0474

Alternate gene names: NA

Gene position: 599980-601422 (Clockwise)

Preceding gene: 119944249

Following gene: 119944251

Centisome position: 13.16

GC content: 45.88

Gene sequence:

>1443_bases
ATGCTACAAAAATCCAATCCGTTAGCAGTGTTTTTAACACTGCTGGCGATCTTCTTTTCTCCCTCTTTATTTGCCAGTAC
GGGTGAAAACATCGATTTAACCTCCCATTTTATTGGCTATGCCGCGGTTTTCTGTTTTACACTTGCCTATATTGTGGTGA
TGCTTGAAGATCTGCTCCATATGCGCAAATCCAAACCTGTTTTGGTGGCTGCCGGCATTATCTGGGCGATGATTGGTTAT
TATTATATGCAGCACGGCATGCCCCATCAGGCAGAAGCGGCTTTCCGTCATAACCTGTTAGAATATGCGGAGCTGTTTTT
CTTTTTGCTGGTGGCTATGACCTACATCAATGCCATGGAAGAACGGCAATTATTCGATGCGTTGCGCGCCTGGATGGTTA
ATAAAGGTTTTACGCTGCGTTTTATTTTCTGGTTAACCGGAATATTGGCTTTCTTTATTTCCCCTATTGCCGATAACCTC
ACCACCGCGCTGCTAATGTGTGCCATTGTGATGAAAGTGGGCGGTTCAAACAAAAAATTTATTGCCCTTGCCTGCATCAA
TATAGTGGTTGCCGCAAATGCGGGTGGTGCCTTCAGCCCCTTTGGTGATATCACTACTCTGATGGTCTGGCAGAAAGGCA
TGGTGAATTTCGGTGAATTCTTTGCCCTGTTCTTACCTTCTGCAGTTAACTTTTTAGTGCCGGCCTTTATCATGAGCTTT
TTTATCTCCAATGAAGTTGCTAAGGGAGATGGTGAAGTCATAGTCACTAAACGCGGCGGACTGCGTATTGTTGGTTTGTT
TCTACTGACCATCGCGCTTGCGGTGTCAGCACATTCATTCTTGGGAATGCCGCCGGTATTGGGCATGATGAGCGGTTTAG
GTCTTTTACAGTTTTTCGCTTTCTTCCTGCGTAGAACTCATAAAAGCTATTATGCGCATGCTATCCACAGCAGCAAAGAT
GAACTTGAGCATGAACGCCTGCGCGGTTTAGGTGATGGTGCACCCTTTGATATATTCAATAAAGTTGCCAAAGCAGAGTG
GGATACCCTGCTGTTCTTCTACGGTGTAGTTATTTGTGTGGGCGGATTGGGTTTTATCGGTTATCTGGGCTTGGTTTCAG
AGGCGATGTACACTAATTGGGATCCCACCTATGCCAATGTGACTATCGGCGTTTTATCGGCTGTTGTTGATAATATACCG
GTGATGTTTGCGGTATTAAGCATGGAGCCCGATATGAGTCACGGGCAGTGGTTACTTGTGACCTTAACAGCCGGTGTGGG
TGGCAGTCTGCTCTCTATCGGTAGTGCGGCAGGTGTAGCCTTAATGGGACAGGCGCGTGGCATTTATACCTTTGGCGCCC
ATCTTAAATGGACGCCTGTGATTGCCTTAGGTTATGTGGCCAGTATTCTGGTGCATTTATGGATTAATAAGTCTCTTTTT
TAG

Upstream 100 bases:

>100_bases
GCGCAAAATTTTACCCGCAAACACTACCCTGAACAGCTTCAAAAGGGTCGGGTTATCAACAATATTCAAGTCAATCACTC
ATTTTTTAAGGATTAATAAA

Downstream 100 bases:

>100_bases
GGGCCGCGAGCTACGGGCTACGAGTTTCGAACTCTTAGCCCGTACTTTGTTTTTAATCAAAAAAATATTATTTAAATCAA
TGTTTTATTTTTGTTTTGTT

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MLQKSNPLAVFLTLLAIFFSPSLFASTGENIDLTSHFIGYAAVFCFTLAYIVVMLEDLLHMRKSKPVLVAAGIIWAMIGY
YYMQHGMPHQAEAAFRHNLLEYAELFFFLLVAMTYINAMEERQLFDALRAWMVNKGFTLRFIFWLTGILAFFISPIADNL
TTALLMCAIVMKVGGSNKKFIALACINIVVAANAGGAFSPFGDITTLMVWQKGMVNFGEFFALFLPSAVNFLVPAFIMSF
FISNEVAKGDGEVIVTKRGGLRIVGLFLLTIALAVSAHSFLGMPPVLGMMSGLGLLQFFAFFLRRTHKSYYAHAIHSSKD
ELEHERLRGLGDGAPFDIFNKVAKAEWDTLLFFYGVVICVGGLGFIGYLGLVSEAMYTNWDPTYANVTIGVLSAVVDNIP
VMFAVLSMEPDMSHGQWLLVTLTAGVGGSLLSIGSAAGVALMGQARGIYTFGAHLKWTPVIALGYVASILVHLWINKSLF

Sequences:

>Translated_480_residues
MLQKSNPLAVFLTLLAIFFSPSLFASTGENIDLTSHFIGYAAVFCFTLAYIVVMLEDLLHMRKSKPVLVAAGIIWAMIGY
YYMQHGMPHQAEAAFRHNLLEYAELFFFLLVAMTYINAMEERQLFDALRAWMVNKGFTLRFIFWLTGILAFFISPIADNL
TTALLMCAIVMKVGGSNKKFIALACINIVVAANAGGAFSPFGDITTLMVWQKGMVNFGEFFALFLPSAVNFLVPAFIMSF
FISNEVAKGDGEVIVTKRGGLRIVGLFLLTIALAVSAHSFLGMPPVLGMMSGLGLLQFFAFFLRRTHKSYYAHAIHSSKD
ELEHERLRGLGDGAPFDIFNKVAKAEWDTLLFFYGVVICVGGLGFIGYLGLVSEAMYTNWDPTYANVTIGVLSAVVDNIP
VMFAVLSMEPDMSHGQWLLVTLTAGVGGSLLSIGSAAGVALMGQARGIYTFGAHLKWTPVIALGYVASILVHLWINKSLF
>Mature_480_residues
MLQKSNPLAVFLTLLAIFFSPSLFASTGENIDLTSHFIGYAAVFCFTLAYIVVMLEDLLHMRKSKPVLVAAGIIWAMIGY
YYMQHGMPHQAEAAFRHNLLEYAELFFFLLVAMTYINAMEERQLFDALRAWMVNKGFTLRFIFWLTGILAFFISPIADNL
TTALLMCAIVMKVGGSNKKFIALACINIVVAANAGGAFSPFGDITTLMVWQKGMVNFGEFFALFLPSAVNFLVPAFIMSF
FISNEVAKGDGEVIVTKRGGLRIVGLFLLTIALAVSAHSFLGMPPVLGMMSGLGLLQFFAFFLRRTHKSYYAHAIHSSKD
ELEHERLRGLGDGAPFDIFNKVAKAEWDTLLFFYGVVICVGGLGFIGYLGLVSEAMYTNWDPTYANVTIGVLSAVVDNIP
VMFAVLSMEPDMSHGQWLLVTLTAGVGGSLLSIGSAAGVALMGQARGIYTFGAHLKWTPVIALGYVASILVHLWINKSLF

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 52655; Mature: 52655

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]