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The map label for this gene is rfaB [C]

Identifier: 119944218

GI number: 119944218

Start: 557733

End: 558944

Strand: Direct

Name: rfaB [C]

Synonym: Ping_0440

Alternate gene names: 119944218

Gene position: 557733-558944 (Clockwise)

Preceding gene: 119944217

Following gene: 119944219

Centisome position: 12.23

GC content: 34.16

Gene sequence:

>1212_bases
ATGTATAGAGTAAAAATATTTTTGGGTCGTACTGTTATTTTTTCTTTATATTTTTTAATCAGATTGTTTTCTTTGCTCCC
TAAGAAAAAGAAAAAAAAATCAGGCAATATCATTGTGTTAACTGGAACCTTCTATTCAAAAAACTGGATTGATGCTCATT
TGCGACCTTTAGTGACATGTAAAAGTGTTAAACATGTTTATATTGTTTGTAATGAACTTGATTATGATTTGCAGGGATTG
AGTGTTGTTGCCCCTTCTAAAATTTCAACTAAACTTATTGGTTCAACACTCGCGCGTTTAATTGCCTTTGCTGTTTGTGT
GGTAAAAAAAAATCCTGATTATATCGGTGGGTTTCATATTTTATTTAATGGGACGTTATCTATTTTATTCGCGAATATAC
TCAGGTGTCGCTCAATCTATTTCAGTGTAGGAGGCATTACAGAAACTCTCGTAGTGGGGAAAACCGAGAATAATTTTTTT
AAATTTTTAAACGGTAAAGATGATTTTTTAACTGCGTATATTTGTAAAATAGCAGCAAATGCAACGCAAATTATAACCAT
GGGGAATGGTGCCAAACTATTTTTCGTTGAAAATGGTGTTAATAATCATATTGTTCATGTTATTTCCGGAGCTATAAATA
AAAATATTTTTTATCCATCTGTACAAGCCGGTGATAAAAAATATGATTTGGTGCTTACGGCGAGATTATCTAAAGTAAAG
CAAGTGGAGTTGTTGTTAAAAATATTAGCCTATTTACAACAGCAGAATTTTCTTTGCAATGCTTTAATTATTGGAGACGG
GCCTTTATTGGAAAGCCTAAAAAAACAGGCAGAAGAGCTTACAATTAGTGAGCAAGTTGATTTTGTTGGTCACCAAAATG
ATATTGTCAGCTGGCTGCATCAAGCAAAAATATACATATTAACATCACGTTCAGAAGGATTGTCCCTTTCAATGCTGGAG
GGGTTGAAATCAGGGTTACCTGCAATTGTACCGAATGTCGGTGATTTATCTGATGTGTTGATTCATGGGTATAATGGAGC
GTTAATTGAAAATCACTCTATTGATGATTTTGCTCACCAAATAACCAGCTTGCTCTCGAACCCTCAAAAACTTGATGAGT
ACTCTCAAAATGCAATTGCTTCGACTCATCGCTTTGATCTTGAATGTGTAAGAAGACAATGGGAGGCAGTATTTATGGTG
GAGGACCGTTAA

Upstream 100 bases:

>100_bases
TAACCCGCCAGATAAGAGTGGTAAGGCAAGTGTATCGATAAAATGGTCTGCTTTAATTTTTCCTGATTTTAAAATCAACT
ACCTATAAGGCAGCATAATT

Downstream 100 bases:

>100_bases
TATGAAAAAATCATTTTCAAAGAAAAATGTATGGGAAGCGATGCCAGCTGTACTAAAAAACATATCAGGAATGGTGCTTT
CATATATTCCTTTAGAATAT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MYRVKIFLGRTVIFSLYFLIRLFSLLPKKKKKKSGNIIVLTGTFYSKNWIDAHLRPLVTCKSVKHVYIVCNELDYDLQGL
SVVAPSKISTKLIGSTLARLIAFAVCVVKKNPDYIGGFHILFNGTLSILFANILRCRSIYFSVGGITETLVVGKTENNFF
KFLNGKDDFLTAYICKIAANATQIITMGNGAKLFFVENGVNNHIVHVISGAINKNIFYPSVQAGDKKYDLVLTARLSKVK
QVELLLKILAYLQQQNFLCNALIIGDGPLLESLKKQAEELTISEQVDFVGHQNDIVSWLHQAKIYILTSRSEGLSLSMLE
GLKSGLPAIVPNVGDLSDVLIHGYNGALIENHSIDDFAHQITSLLSNPQKLDEYSQNAIASTHRFDLECVRRQWEAVFMV
EDR

Sequences:

>Translated_403_residues
MYRVKIFLGRTVIFSLYFLIRLFSLLPKKKKKKSGNIIVLTGTFYSKNWIDAHLRPLVTCKSVKHVYIVCNELDYDLQGL
SVVAPSKISTKLIGSTLARLIAFAVCVVKKNPDYIGGFHILFNGTLSILFANILRCRSIYFSVGGITETLVVGKTENNFF
KFLNGKDDFLTAYICKIAANATQIITMGNGAKLFFVENGVNNHIVHVISGAINKNIFYPSVQAGDKKYDLVLTARLSKVK
QVELLLKILAYLQQQNFLCNALIIGDGPLLESLKKQAEELTISEQVDFVGHQNDIVSWLHQAKIYILTSRSEGLSLSMLE
GLKSGLPAIVPNVGDLSDVLIHGYNGALIENHSIDDFAHQITSLLSNPQKLDEYSQNAIASTHRFDLECVRRQWEAVFMV
EDR
>Mature_403_residues
MYRVKIFLGRTVIFSLYFLIRLFSLLPKKKKKKSGNIIVLTGTFYSKNWIDAHLRPLVTCKSVKHVYIVCNELDYDLQGL
SVVAPSKISTKLIGSTLARLIAFAVCVVKKNPDYIGGFHILFNGTLSILFANILRCRSIYFSVGGITETLVVGKTENNFF
KFLNGKDDFLTAYICKIAANATQIITMGNGAKLFFVENGVNNHIVHVISGAINKNIFYPSVQAGDKKYDLVLTARLSKVK
QVELLLKILAYLQQQNFLCNALIIGDGPLLESLKKQAEELTISEQVDFVGHQNDIVSWLHQAKIYILTSRSEGLSLSMLE
GLKSGLPAIVPNVGDLSDVLIHGYNGALIENHSIDDFAHQITSLLSNPQKLDEYSQNAIASTHRFDLECVRRQWEAVFMV
EDR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 45067; Mature: 45067

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVKIFLGRTVIFSLYFLIRLFSLLPKKKKKKSGNIIVLTGTFYSKNWIDAHLRPLVTC
CEEEEEEECHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
KSVKHVYIVCNELDYDLQGLSVVAPSKISTKLIGSTLARLIAFAVCVVKKNPDYIGGFHI
CCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEE
LFNGTLSILFANILRCRSIYFSVGGITETLVVGKTENNFFKFLNGKDDFLTAYICKIAAN
EEHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCC
ATQIITMGNGAKLFFVENGVNNHIVHVISGAINKNIFYPSVQAGDKKYDLVLTARLSKVK
CEEEEEECCCEEEEEEECCCCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEEEHHHHHHH
QVELLLKILAYLQQQNFLCNALIIGDGPLLESLKKQAEELTISEQVDFVGHQNDIVSWLH
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH
QAKIYILTSRSEGLSLSMLEGLKSGLPAIVPNVGDLSDVLIHGYNGALIENHSIDDFAHQ
HCEEEEEEECCCCCCHHHHHHHHCCCCEECCCCCCHHHHHEECCCCCEEECCCHHHHHHH
ITSLLSNPQKLDEYSQNAIASTHRFDLECVRRQWEAVFMVEDR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MYRVKIFLGRTVIFSLYFLIRLFSLLPKKKKKKSGNIIVLTGTFYSKNWIDAHLRPLVTC
CEEEEEEECHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
KSVKHVYIVCNELDYDLQGLSVVAPSKISTKLIGSTLARLIAFAVCVVKKNPDYIGGFHI
CCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEE
LFNGTLSILFANILRCRSIYFSVGGITETLVVGKTENNFFKFLNGKDDFLTAYICKIAAN
EEHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCC
ATQIITMGNGAKLFFVENGVNNHIVHVISGAINKNIFYPSVQAGDKKYDLVLTARLSKVK
CEEEEEECCCEEEEEEECCCCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEEEHHHHHHH
QVELLLKILAYLQQQNFLCNALIIGDGPLLESLKKQAEELTISEQVDFVGHQNDIVSWLH
HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH
QAKIYILTSRSEGLSLSMLEGLKSGLPAIVPNVGDLSDVLIHGYNGALIENHSIDDFAHQ
HCEEEEEEECCCCCCHHHHHHHHCCCCEECCCCCCHHHHHEECCCCCEEECCCHHHHHHH
ITSLLSNPQKLDEYSQNAIASTHRFDLECVRRQWEAVFMVEDR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]