Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944217
Identifier: 119944217
GI number: 119944217
Start: 556497
End: 557720
Strand: Direct
Name: 119944217
Synonym: Ping_0439
Alternate gene names: NA
Gene position: 556497-557720 (Clockwise)
Preceding gene: 119944216
Following gene: 119944218
Centisome position: 12.2
GC content: 36.52
Gene sequence:
>1224_bases ATGGATGTTAGTTTACGAAAGTACCCGTACCCTTATAGTGCAATGCTGGCTATTTGTAGTGACTTAGATGAAACACCAAA TAAAAAAATTTATTTTGAAACCGCGCGTTATTTGAATACAACAGAAGAAACGCTGCTTGGGAAAGGGGTCGGCTTAGAAG TAGGTAATACAATTTATTTTGATATGCCAGCTCATAATTTTTCTTATACTAATACCGATGATGATGGCCGTGAAAAAGTG CAAAAACTGATTCAGTCAGGACATATTGATTGTTTACATTCGTTTGGTGATTTTGTTAATTCAAGAGGGAAAATTGAACA ATACTGGGATGAAATTCGCCAAAGTGAACGAAAAATTGAAGTATGGGTTGATCATGCCCAAGCACCCACAAATTTAGATA ATGATATTATGCAAGGACAAGGTGCGGAGATTGGGAAGCCTGCTTATCATAGTGATTTAACTGTTAAATCAGGTGGTTTG CCATTTATTTGGAAGGGCCGAGTAACCAGTTGTGTGGCGCAAAATAGCAATCGTAGTTACGCTAGTATATTTAATATAAA ACAGATTAAAGCATCGAGTAAAACCATTTTATTGGAAGTTATTAAAGGTTGGTTAGCACGTTTGGGTAATCAAAAATATG CGATGCATAAGGATAATAAGGTGTTACGGAAAACACAGTTAGTCGATGGTACGCCCGTGATAGAGTTTTTGCGTTGTAAT CCATCCTGGGGTGGCGTTTCAAGTAATGATAAAGCGCGAGGTATCCATAATGTACTCACTAAAAATGTACTTGATACGCT AGTTGCTAAACAGGGTAGTAGTATCTTATACAGCCATTTGGGAAAGGTGTTTAGTGTTGATCGGCCCTTTAATAATGAAA CTCGTCATTCTTTTGAGTTATTAGCTAGTTATCAAAAGAGAGGGGATATTTTAACTGCGACGACTCGGCGGTTGTTAGGA TATTTTCGGACTTTAGAAGCGCTAAGCTTCACTGTGGAATCGGTTGAGGATGAAACTAACATTAACCTTTCTACAGAATA TACTGGAGAAGACCTTAATGGCTTAACTTGGTATGTAGAGGAACCAGAAAAAATTAGTTTGTATATCAACAAAAAAAAAT ATTCAGATTTACAAATTAACCCGCCAGATAAGAGTGGTAAGGCAAGTGTATCGATAAAATGGTCTGCTTTAATTTTTCCT GATTTTAAAATCAACTACCTATAA
Upstream 100 bases:
>100_bases CGTTTATTTAGTTCCCAATAAAATGCAGCAAAAACTTCTGCTTCGTTGTAAATTTCAATAATGAATTATTTTAAAATATA TTTATTAAGGTTAACTAAAT
Downstream 100 bases:
>100_bases GGCAGCATAATTATGTATAGAGTAAAAATATTTTTGGGTCGTACTGTTATTTTTTCTTTATATTTTTTAATCAGATTGTT TTCTTTGCTCCCTAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MDVSLRKYPYPYSAMLAICSDLDETPNKKIYFETARYLNTTEETLLGKGVGLEVGNTIYFDMPAHNFSYTNTDDDGREKV QKLIQSGHIDCLHSFGDFVNSRGKIEQYWDEIRQSERKIEVWVDHAQAPTNLDNDIMQGQGAEIGKPAYHSDLTVKSGGL PFIWKGRVTSCVAQNSNRSYASIFNIKQIKASSKTILLEVIKGWLARLGNQKYAMHKDNKVLRKTQLVDGTPVIEFLRCN PSWGGVSSNDKARGIHNVLTKNVLDTLVAKQGSSILYSHLGKVFSVDRPFNNETRHSFELLASYQKRGDILTATTRRLLG YFRTLEALSFTVESVEDETNINLSTEYTGEDLNGLTWYVEEPEKISLYINKKKYSDLQINPPDKSGKASVSIKWSALIFP DFKINYL
Sequences:
>Translated_407_residues MDVSLRKYPYPYSAMLAICSDLDETPNKKIYFETARYLNTTEETLLGKGVGLEVGNTIYFDMPAHNFSYTNTDDDGREKV QKLIQSGHIDCLHSFGDFVNSRGKIEQYWDEIRQSERKIEVWVDHAQAPTNLDNDIMQGQGAEIGKPAYHSDLTVKSGGL PFIWKGRVTSCVAQNSNRSYASIFNIKQIKASSKTILLEVIKGWLARLGNQKYAMHKDNKVLRKTQLVDGTPVIEFLRCN PSWGGVSSNDKARGIHNVLTKNVLDTLVAKQGSSILYSHLGKVFSVDRPFNNETRHSFELLASYQKRGDILTATTRRLLG YFRTLEALSFTVESVEDETNINLSTEYTGEDLNGLTWYVEEPEKISLYINKKKYSDLQINPPDKSGKASVSIKWSALIFP DFKINYL >Mature_407_residues MDVSLRKYPYPYSAMLAICSDLDETPNKKIYFETARYLNTTEETLLGKGVGLEVGNTIYFDMPAHNFSYTNTDDDGREKV QKLIQSGHIDCLHSFGDFVNSRGKIEQYWDEIRQSERKIEVWVDHAQAPTNLDNDIMQGQGAEIGKPAYHSDLTVKSGGL PFIWKGRVTSCVAQNSNRSYASIFNIKQIKASSKTILLEVIKGWLARLGNQKYAMHKDNKVLRKTQLVDGTPVIEFLRCN PSWGGVSSNDKARGIHNVLTKNVLDTLVAKQGSSILYSHLGKVFSVDRPFNNETRHSFELLASYQKRGDILTATTRRLLG YFRTLEALSFTVESVEDETNINLSTEYTGEDLNGLTWYVEEPEKISLYINKKKYSDLQINPPDKSGKASVSIKWSALIFP DFKINYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46114; Mature: 46114
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSLRKYPYPYSAMLAICSDLDETPNKKIYFETARYLNTTEETLLGKGVGLEVGNTIYF CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCHHHHHHCCCCCEEECCEEEE DMPAHNFSYTNTDDDGREKVQKLIQSGHIDCLHSFGDFVNSRGKIEQYWDEIRQSERKIE ECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE VWVDHAQAPTNLDNDIMQGQGAEIGKPAYHSDLTVKSGGLPFIWKGRVTSCVAQNSNRSY EEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHCCCCCCC ASIFNIKQIKASSKTILLEVIKGWLARLGNQKYAMHKDNKVLRKTQLVDGTPVIEFLRCN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCEEEEEEEC PSWGGVSSNDKARGIHNVLTKNVLDTLVAKQGSSILYSHLGKVFSVDRPFNNETRHSFEL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHHHHHH LASYQKRGDILTATTRRLLGYFRTLEALSFTVESVEDETNINLSTEYTGEDLNGLTWYVE HHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEE EPEKISLYINKKKYSDLQINPPDKSGKASVSIKWSALIFPDFKINYL CCCEEEEEEECCCCCCCEECCCCCCCCEEEEEEEEEEEECCEEEECC >Mature Secondary Structure MDVSLRKYPYPYSAMLAICSDLDETPNKKIYFETARYLNTTEETLLGKGVGLEVGNTIYF CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCHHHHHHCCCCCEEECCEEEE DMPAHNFSYTNTDDDGREKVQKLIQSGHIDCLHSFGDFVNSRGKIEQYWDEIRQSERKIE ECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE VWVDHAQAPTNLDNDIMQGQGAEIGKPAYHSDLTVKSGGLPFIWKGRVTSCVAQNSNRSY EEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHCCCCCCC ASIFNIKQIKASSKTILLEVIKGWLARLGNQKYAMHKDNKVLRKTQLVDGTPVIEFLRCN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCEEEEEEEC PSWGGVSSNDKARGIHNVLTKNVLDTLVAKQGSSILYSHLGKVFSVDRPFNNETRHSFEL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHHHHHH LASYQKRGDILTATTRRLLGYFRTLEALSFTVESVEDETNINLSTEYTGEDLNGLTWYVE HHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEE EPEKISLYINKKKYSDLQINPPDKSGKASVSIKWSALIFPDFKINYL CCCEEEEEEECCCCCCCEECCCCCCCCEEEEEEEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA