Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944186
Identifier: 119944186
GI number: 119944186
Start: 514689
End: 515459
Strand: Direct
Name: 119944186
Synonym: Ping_0406
Alternate gene names: NA
Gene position: 514689-515459 (Clockwise)
Preceding gene: 119944185
Following gene: 119944187
Centisome position: 11.29
GC content: 41.37
Gene sequence:
>771_bases ATGGCGACAGATTGGGACGTCTTAAATCAGCAATTTATAAAAGAAAATTTACGCACTGAGATCTCAGTAAAAGCCTGGTG CGAAAAGAAAAAATTGAATTACGCGACAGCACGTCGACATATAAAACCAAGTGCGCACGTTGCGCAGCCATCAGTGCGTA AAGTGCGCAGTGCTGAACAGACTGAAAATCCTCGGAAACCTGACCTTCCAAATACAGATAATAAACAAATTCAATCAGTT AAAGAAATTCATGAAGATGAAGTTATGCACAATGACTCAGAGAAAAGGTCGGCCTCAAAGAAACGAGTTTTGTCGCTGGG GAATCAAAATGCGCGCACATTTGGTCATTACAGTGAATTTATTACCACGGATGAAGATGCGCTGCGGTATTCTTCCGCTT CAATGGCATCACTACGCGATGAGCTTTGTTTAATACGTATGCAGCTATCAAATTTAATGGTTGCCATTAAACAAACCGAA GCAGATCTAAATGGTGATATAACGGTTGAACAGAAGATTAGTTTGAATAACACCTATGACAAGTTTCAAACTAACGCTAA CGTCAAAGTCGCGCGTATCGAGTCATTAGAGATCTCATTGGTTGGCCTGGAAAAAACGAAAGCTGATACAGAAAGAAGTA TTGTGCTAACCCGCAAGGCACAATTGGAAGCTGATAAATTAAGTCGTGAATCGGGCGGCAGCGAAACCCCACTCAGTAAA ATATATGATGAGATTTTGGCGATGGGCAGTGACGGTATGCTGAATCACTAA
Upstream 100 bases:
>100_bases TATTAGTCACGTAAGACAATAGTCATCAATTATTTTAACAAACCTGCTTTGATAACCAGTAAAAACGAACTAATATGAGT AAAAATAAGGAGGAAGGCTC
Downstream 100 bases:
>100_bases TGGCTAAAAATTAGAGTCGGCAAGCATCCTGACACGGCAAGCATCACTATAACCAACAGCTATCCTGTTACGTTCCCTTA TAAAATCTATTTTCAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MATDWDVLNQQFIKENLRTEISVKAWCEKKKLNYATARRHIKPSAHVAQPSVRKVRSAEQTENPRKPDLPNTDNKQIQSV KEIHEDEVMHNDSEKRSASKKRVLSLGNQNARTFGHYSEFITTDEDALRYSSASMASLRDELCLIRMQLSNLMVAIKQTE ADLNGDITVEQKISLNNTYDKFQTNANVKVARIESLEISLVGLEKTKADTERSIVLTRKAQLEADKLSRESGGSETPLSK IYDEILAMGSDGMLNH
Sequences:
>Translated_256_residues MATDWDVLNQQFIKENLRTEISVKAWCEKKKLNYATARRHIKPSAHVAQPSVRKVRSAEQTENPRKPDLPNTDNKQIQSV KEIHEDEVMHNDSEKRSASKKRVLSLGNQNARTFGHYSEFITTDEDALRYSSASMASLRDELCLIRMQLSNLMVAIKQTE ADLNGDITVEQKISLNNTYDKFQTNANVKVARIESLEISLVGLEKTKADTERSIVLTRKAQLEADKLSRESGGSETPLSK IYDEILAMGSDGMLNH >Mature_255_residues ATDWDVLNQQFIKENLRTEISVKAWCEKKKLNYATARRHIKPSAHVAQPSVRKVRSAEQTENPRKPDLPNTDNKQIQSVK EIHEDEVMHNDSEKRSASKKRVLSLGNQNARTFGHYSEFITTDEDALRYSSASMASLRDELCLIRMQLSNLMVAIKQTEA DLNGDITVEQKISLNNTYDKFQTNANVKVARIESLEISLVGLEKTKADTERSIVLTRKAQLEADKLSRESGGSETPLSKI YDEILAMGSDGMLNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28963; Mature: 28832
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDWDVLNQQFIKENLRTEISVKAWCEKKKLNYATARRHIKPSAHVAQPSVRKVRSAEQ CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHHHHHHHH TENPRKPDLPNTDNKQIQSVKEIHEDEVMHNDSEKRSASKKRVLSLGNQNARTFGHYSEF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTDEDALRYSSASMASLRDELCLIRMQLSNLMVAIKQTEADLNGDITVEQKISLNNTYD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH KFQTNANVKVARIESLEISLVGLEKTKADTERSIVLTRKAQLEADKLSRESGGSETPLSK HHHCCCCEEEEEEEEEEEEEEECHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHH IYDEILAMGSDGMLNH HHHHHHHCCCCCCCCC >Mature Secondary Structure ATDWDVLNQQFIKENLRTEISVKAWCEKKKLNYATARRHIKPSAHVAQPSVRKVRSAEQ CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCHHCCHHHHHHHHHHH TENPRKPDLPNTDNKQIQSVKEIHEDEVMHNDSEKRSASKKRVLSLGNQNARTFGHYSEF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTDEDALRYSSASMASLRDELCLIRMQLSNLMVAIKQTEADLNGDITVEQKISLNNTYD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH KFQTNANVKVARIESLEISLVGLEKTKADTERSIVLTRKAQLEADKLSRESGGSETPLSK HHHCCCCEEEEEEEEEEEEEEECHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHH IYDEILAMGSDGMLNH HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA