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The map label for this gene is intA [C]

Identifier: 119944185

GI number: 119944185

Start: 513326

End: 514534

Strand: Direct

Name: intA [C]

Synonym: Ping_0405

Alternate gene names: 119944185

Gene position: 513326-514534 (Clockwise)

Preceding gene: 119944184

Following gene: 119944186

Centisome position: 11.26

GC content: 42.68

Gene sequence:

>1209_bases
ATGACAACTAAAGTGATAAAGTTTTCTGCTGCGGCGTTAAAGTCTGCAGAGCAAGACATTGCATTTAACGAGTTCCGTGA
TGCGCGTTATCCGCTTCGTTTGCGCTTGCATAAATGCAGAAGTAAGGGCAGCTGGTATTTAGTTAGATCGACTCATGGCA
AATCAAAACATGAAAAAATCGGCAGCTATCCGAACATTAAATTAAAAGATATTTTAGCTAATTTAAGCCGCAATTTAATT
GCTGATACTGCGGAGCCAGAAAGTGAATTTCAAACCCTTGGACAGCTTTTAAAATGGTATTTGGCACGTACTGAACAGAA
CAGCCAAATCACAAAACAGCGTAAAACGACTATACGTTGGGCGATCACCCGGCATCTATTACCCTTAATTGACGAATTAC
CGCTAAATCAGATCACTTACGCTGCATTAGATAAACATTTCTTTCAGCCGATACAGCAAAAATACGCAATGACCACGGCG
AAAAACATTTGGATTATTTTAAAGCAGTCCGTTGCTCAAGCGGTAAAGCTAGTTCTGATTAAGCCTGATCCCATATCATC
GTTCGAGTTTAGTGATTTTATTAAGGTAGGTAAAACCGCCGAGCGTCCGGGACTTAAATATTACCAGGTCGCAAAGCTCT
TTATTGATGCACAAGCTGCCAGTGTTCCCGCCCGCGCCTTAGTTGCAATTATGCTACTGCATGGCACGCGACTAGGTGAA
ACAAGGCAAACAAAATGGAGTGATATCTGTTTTAAAACGGATCTTTGGTCAATACCCGGCCCGATCACTAAAACCCGCAC
AGAATTAAATCTGCCTATCACTCCATTAGTTAAAAAAATCCTTACTGATTATAGAAACTGGCAGGAACAGAACGGCTATA
CCGGCGTGTTTGTATTCCCAGCACCCAAAGGCCGTAGTGCTATTTCAGCCTATGCAGCCAATGAACTGATACAAGAGGTC
AGTCTCAATAACTGGACCAGCCATCAACTGCGTAAGTTCGCACGCACCACGTGGGTTGATTTAAAAATCGATTTCCTGAT
AGCAGAGCTATTGTTAAATCATAAACTAACCAAGGTGACTGCCGCTTATATACATACCGATGCAGTAGAGGCTAAGAGCG
AAGCGCTAACCGTTTACCATGTCTGGTTAGCCGCTGAGTTTTCTGCACTAAATGACATAATAAATGATGCTATCCCGGCG
CGACCGTAA

Upstream 100 bases:

>100_bases
TTCATTTGCCAGTAACGATTTAAAATCATACAACCAACTACAATTAGTTATAAAAAAAAGGTATAATTAAGCTCTGTTTG
CAGCATTTTAAGGGCTTAGA

Downstream 100 bases:

>100_bases
TTAAACCCCCATTACTTTAACTGATTACATATCATAGTGTTATAGCGTTATCGCTATTAGTCACGTAAGACAATAGTCAT
CAATTATTTTAACAAACCTG

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Integrase; Integrase Phage Family; Phage Family Integrase; Phage Integrase-Like Protein; Prophage Integrase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTTKVIKFSAAALKSAEQDIAFNEFRDARYPLRLRLHKCRSKGSWYLVRSTHGKSKHEKIGSYPNIKLKDILANLSRNLI
ADTAEPESEFQTLGQLLKWYLARTEQNSQITKQRKTTIRWAITRHLLPLIDELPLNQITYAALDKHFFQPIQQKYAMTTA
KNIWIILKQSVAQAVKLVLIKPDPISSFEFSDFIKVGKTAERPGLKYYQVAKLFIDAQAASVPARALVAIMLLHGTRLGE
TRQTKWSDICFKTDLWSIPGPITKTRTELNLPITPLVKKILTDYRNWQEQNGYTGVFVFPAPKGRSAISAYAANELIQEV
SLNNWTSHQLRKFARTTWVDLKIDFLIAELLLNHKLTKVTAAYIHTDAVEAKSEALTVYHVWLAAEFSALNDIINDAIPA
RP

Sequences:

>Translated_402_residues
MTTKVIKFSAAALKSAEQDIAFNEFRDARYPLRLRLHKCRSKGSWYLVRSTHGKSKHEKIGSYPNIKLKDILANLSRNLI
ADTAEPESEFQTLGQLLKWYLARTEQNSQITKQRKTTIRWAITRHLLPLIDELPLNQITYAALDKHFFQPIQQKYAMTTA
KNIWIILKQSVAQAVKLVLIKPDPISSFEFSDFIKVGKTAERPGLKYYQVAKLFIDAQAASVPARALVAIMLLHGTRLGE
TRQTKWSDICFKTDLWSIPGPITKTRTELNLPITPLVKKILTDYRNWQEQNGYTGVFVFPAPKGRSAISAYAANELIQEV
SLNNWTSHQLRKFARTTWVDLKIDFLIAELLLNHKLTKVTAAYIHTDAVEAKSEALTVYHVWLAAEFSALNDIINDAIPA
RP
>Mature_401_residues
TTKVIKFSAAALKSAEQDIAFNEFRDARYPLRLRLHKCRSKGSWYLVRSTHGKSKHEKIGSYPNIKLKDILANLSRNLIA
DTAEPESEFQTLGQLLKWYLARTEQNSQITKQRKTTIRWAITRHLLPLIDELPLNQITYAALDKHFFQPIQQKYAMTTAK
NIWIILKQSVAQAVKLVLIKPDPISSFEFSDFIKVGKTAERPGLKYYQVAKLFIDAQAASVPARALVAIMLLHGTRLGET
RQTKWSDICFKTDLWSIPGPITKTRTELNLPITPLVKKILTDYRNWQEQNGYTGVFVFPAPKGRSAISAYAANELIQEVS
LNNWTSHQLRKFARTTWVDLKIDFLIAELLLNHKLTKVTAAYIHTDAVEAKSEALTVYHVWLAAEFSALNDIINDAIPAR
P

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45802; Mature: 45670

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKVIKFSAAALKSAEQDIAFNEFRDARYPLRLRLHKCRSKGSWYLVRSTHGKSKHEKI
CCCEEEEHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHC
GSYPNIKLKDILANLSRNLIADTAEPESEFQTLGQLLKWYLARTEQNSQITKQRKTTIRW
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AITRHLLPLIDELPLNQITYAALDKHFFQPIQQKYAMTTAKNIWIILKQSVAQAVKLVLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHEEEEE
KPDPISSFEFSDFIKVGKTAERPGLKYYQVAKLFIDAQAASVPARALVAIMLLHGTRLGE
CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TRQTKWSDICFKTDLWSIPGPITKTRTELNLPITPLVKKILTDYRNWQEQNGYTGVFVFP
CCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
APKGRSAISAYAANELIQEVSLNNWTSHQLRKFARTTWVDLKIDFLIAELLLNHKLTKVT
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHCCHHHHHH
AAYIHTDAVEAKSEALTVYHVWLAAEFSALNDIINDAIPARP
HHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTKVIKFSAAALKSAEQDIAFNEFRDARYPLRLRLHKCRSKGSWYLVRSTHGKSKHEKI
CCEEEEHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHC
GSYPNIKLKDILANLSRNLIADTAEPESEFQTLGQLLKWYLARTEQNSQITKQRKTTIRW
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AITRHLLPLIDELPLNQITYAALDKHFFQPIQQKYAMTTAKNIWIILKQSVAQAVKLVLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHEEEEE
KPDPISSFEFSDFIKVGKTAERPGLKYYQVAKLFIDAQAASVPARALVAIMLLHGTRLGE
CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TRQTKWSDICFKTDLWSIPGPITKTRTELNLPITPLVKKILTDYRNWQEQNGYTGVFVFP
CCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
APKGRSAISAYAANELIQEVSLNNWTSHQLRKFARTTWVDLKIDFLIAELLLNHKLTKVT
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHCCHHHHHH
AAYIHTDAVEAKSEALTVYHVWLAAEFSALNDIINDAIPARP
HHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA