Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is fba [H]
Identifier: 119944152
GI number: 119944152
Start: 477695
End: 478771
Strand: Direct
Name: fba [H]
Synonym: Ping_0372
Alternate gene names: 119944152
Gene position: 477695-478771 (Clockwise)
Preceding gene: 119944151
Following gene: 119944153
Centisome position: 10.48
GC content: 42.43
Gene sequence:
>1077_bases ATGACTAAGATTTTAGACGTAGTAAAACCTGGTGTTCTCACTGGTGATGATTTACAAAAAGTATTTAAAGTTGCAAAAGA AAACAAATTTGCACTTCCAGCGGTAAACGTTGTTGGCAGTGATTCAATCAATGCTGTACTTGAAGCTGCAGCTAAAGTTA AGGCACCCGTTGTAATCCAATTCTCTAATGGTGGTGCTGCATTTAACGCAGGTAAAGGTCTTAAACTTCCTGGTCACGAA GCCGCTATTCTTGGTGCTGTTTCTGGTGCTAAACACGTTCACGCAATGGCTGAAGCTTATGGCGTTCCTGTTATTCTTCA CACCGACCACGCTGCAAGGAAACTACTGCCTTGGATCGACGGACTACTAACTGCTTCTGAAGCGCATTTTGCAGAAACGG GTAAGCCTCTTTTCTCTTCACACATGATAGATCTTTCTGAAGAGCCTCTAGAAGAAAATATTGCAACTTGTGCTGAGTAC CTAACGCGTATGTCTAAAATGGGCATGACGTTAGAAATAGAACTAGGTTGTACTGGTGGTGAAGAAGACGGTGTTGATAA CTCTGGTATGGATGACTCATTACTTTATACTCAACCCTCTGAAGTTGATTATGCCAATACTGAGCTTTCTAAAATCAGCC CTAACTTCACTATTGCGGCTTCTTTTGGTAACGTACACGGCGTATACAAGCCAGGTAATGTTAAACTGACTCCAGCTATC CTACGTGAATCACAAGCATTTGTGTCAGAGAAGCACGGTCTTCCAACAAACAGCTTAAACTTCGTATTCCACGGTGGTTC TGGTTCATCTGAAGCTGAAATTCAAGAGTCTATCGGTTACGGTGTTATCAAAATGAATATCGATACAGATACGCAGTGGG CATGTTGGGATGGCGTTCGTGGTTATGAAGCTAAAAACCATGATTTCCTACAAGGCCAAATCGGTAACCCAACGGGTGAA GATGCTCCTAACAAGAAATACTATGATCCACGTGCATGGTTACGCGCTGCTCAAGAATCTATGGTTGCACGTCTTGAGAA AGCATTCTCAGATCTTAACGCAGTTGATGTACTATAA
Upstream 100 bases:
>100_bases TCCAATTTCCATTTTCGTGCTTTTCATCACAAAATTGTGTAATATCAGCCGTGAAATTGAGCAAAATGTAATTTAACTCT AAATAAACAGGACTATCCTT
Downstream 100 bases:
>100_bases TTTAACGGATTCAGTTACTAGTCAGTTGAATATTTAAATTATCAAGCCAGCTTAATTGCTGGCTTTTTTTTTACCCAAAA TAACACCTCGATGCAACTAA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTKILDVVKPGVLTGDDLQKVFKVAKENKFALPAVNVVGSDSINAVLEAAAKVKAPVVIQFSNGGAAFNAGKGLKLPGHE AAILGAVSGAKHVHAMAEAYGVPVILHTDHAARKLLPWIDGLLTASEAHFAETGKPLFSSHMIDLSEEPLEENIATCAEY LTRMSKMGMTLEIELGCTGGEEDGVDNSGMDDSLLYTQPSEVDYANTELSKISPNFTIAASFGNVHGVYKPGNVKLTPAI LRESQAFVSEKHGLPTNSLNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWACWDGVRGYEAKNHDFLQGQIGNPTGE DAPNKKYYDPRAWLRAAQESMVARLEKAFSDLNAVDVL
Sequences:
>Translated_358_residues MTKILDVVKPGVLTGDDLQKVFKVAKENKFALPAVNVVGSDSINAVLEAAAKVKAPVVIQFSNGGAAFNAGKGLKLPGHE AAILGAVSGAKHVHAMAEAYGVPVILHTDHAARKLLPWIDGLLTASEAHFAETGKPLFSSHMIDLSEEPLEENIATCAEY LTRMSKMGMTLEIELGCTGGEEDGVDNSGMDDSLLYTQPSEVDYANTELSKISPNFTIAASFGNVHGVYKPGNVKLTPAI LRESQAFVSEKHGLPTNSLNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWACWDGVRGYEAKNHDFLQGQIGNPTGE DAPNKKYYDPRAWLRAAQESMVARLEKAFSDLNAVDVL >Mature_357_residues TKILDVVKPGVLTGDDLQKVFKVAKENKFALPAVNVVGSDSINAVLEAAAKVKAPVVIQFSNGGAAFNAGKGLKLPGHEA AILGAVSGAKHVHAMAEAYGVPVILHTDHAARKLLPWIDGLLTASEAHFAETGKPLFSSHMIDLSEEPLEENIATCAEYL TRMSKMGMTLEIELGCTGGEEDGVDNSGMDDSLLYTQPSEVDYANTELSKISPNFTIAASFGNVHGVYKPGNVKLTPAIL RESQAFVSEKHGLPTNSLNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWACWDGVRGYEAKNHDFLQGQIGNPTGED APNKKYYDPRAWLRAAQESMVARLEKAFSDLNAVDVL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789293, Length=360, Percent_Identity=77.2222222222222, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI87082041, Length=333, Percent_Identity=25.2252252252252, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788072, Length=310, Percent_Identity=25.4838709677419, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=49.002849002849, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38347; Mature: 38215
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00152 ATPASE_ALPHA_BETA ; PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILDVVKPGVLTGDDLQKVFKVAKENKFALPAVNVVGSDSINAVLEAAAKVKAPVVIQ CCCHHHHHCCCCCCCHHHHHHHHHHHCCCEECCEEEECCCCHHHHHHHHHHHCCCCEEEE FSNGGAAFNAGKGLKLPGHEAAILGAVSGAKHVHAMAEAYGVPVILHTDHAARKLLPWID ECCCCCEEECCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH GLLTASEAHFAETGKPLFSSHMIDLSEEPLEENIATCAEYLTRMSKMGMTLEIELGCTGG HHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSGMDDSLLYTQPSEVDYANTELSKISPNFTIAASFGNVHGVYKPGNVKLTPAI CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCEEECCCCEEECHHH LRESQAFVSEKHGLPTNSLNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWACWDGVR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCC GYEAKNHDFLQGQIGNPTGEDAPNKKYYDPRAWLRAAQESMVARLEKAFSDLNAVDVL CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TKILDVVKPGVLTGDDLQKVFKVAKENKFALPAVNVVGSDSINAVLEAAAKVKAPVVIQ CCHHHHHCCCCCCCHHHHHHHHHHHCCCEECCEEEECCCCHHHHHHHHHHHCCCCEEEE FSNGGAAFNAGKGLKLPGHEAAILGAVSGAKHVHAMAEAYGVPVILHTDHAARKLLPWID ECCCCCEEECCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH GLLTASEAHFAETGKPLFSSHMIDLSEEPLEENIATCAEYLTRMSKMGMTLEIELGCTGG HHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSGMDDSLLYTQPSEVDYANTELSKISPNFTIAASFGNVHGVYKPGNVKLTPAI CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCEEECCCCEEECHHH LRESQAFVSEKHGLPTNSLNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWACWDGVR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCC GYEAKNHDFLQGQIGNPTGEDAPNKKYYDPRAWLRAAQESMVARLEKAFSDLNAVDVL CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12542086 [H]