| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is trxB [H]
Identifier: 119867138
GI number: 119867138
Start: 1170690
End: 1172354
Strand: Reverse
Name: trxB [H]
Synonym: Mkms_1086
Alternate gene names: 119867138
Gene position: 1172354-1170690 (Counterclockwise)
Preceding gene: 119867140
Following gene: 119867137
Centisome position: 20.43
GC content: 69.13
Gene sequence:
>1665_bases ATGACAGGCCCTACCGCGGTACCCCGCAAACCCGTGATCCTCACCGTCGACGACGACCCTGCGGTCTCGCGTGCGGTGGC GCGCGACCTGCGCCGCCACTACGGCGAGACCTTCCGCATCGTGCGGGCCGAATCCGGCCCGGATGCGCTCGAGACACTCA ACGAACTGAAGCTGCGCGGCGAGACCGTCGCGGTGTTCGTCGCCGACTACCGGATGCCGCAGATGAGCGGTATCGAATTC CTCGAAGAGGCGATGGACCTCTACCCCATGGCGCGCCGCGTACTGCTCACCGCGTACGCCGACACCCACGCGGCCATCGA CGCGATCAACGTCGTCGACCTGGACCACTACCTGCTCAAACCGTGGGACCCCCCGGAGGAGAAGCTCTACCCGGTCATCG ACGCGCTGATCGAGGCGTGGCGCGCCACCGGGGACCGGGCCATCCCGCACACCAAGATCATCGGCCATCCGTGGAACGCC AGATCGTCGGAGGTGCGCGAGTTCCTGGCCCGGAACCGGTTGTACTACACCTGGTTTCGCGCCGACGAAGCCAAGGGCAG ACAGCTGCTGGAGGCGGCCGGCCAGGACGGGATGACGCTGCCGGTGGTGATCACCGAACAGGGTGAGACGCTGGTCGACC CCTCCGACGCCGAACTGGGCGCCACGCTCGGGCTCACCACGACCCCGGCCGAGGACTTCTACGACCTGGTGGTGATCGGT GGCGGGCCCGCCGGGCTGGCCGCCGCCGTGTACGGCGCGTCCGAGGGTCTCAAGACGGTGCTCATCGAACGCACCGCCAC CGGCGGGCAGGCCGGGCAGAGCTCCCGCATCGAGAACTACCTGGGCTTCCCCGACGGCCTGTCGGGTTCTCAGCTCGCCG AGCGGGCGCGCAGGCAGGCCGAGAAGTTCGACGCCGAACTGATCACCGCGGCGGAGGTGACGGCGTTGGAGGTCGACGGG TCGGCCCGCACCGTGCGGCTGTCCGACGGCCGGTCGATCGGTGCGCGGGCGGTGATCCTGGCGATGGGCGTCGAGTACCG CCAGCTGCCGGCCGAGGGTTGCGACGGGTTGACCGGCGCCGGGGTGTACTACGGCGCGACGTCGTCGGTGGCGGCCGACT GCGAGGACGACGAGGTGTACGTGATCGGCGGCGCGAACTCCGCCGGCCAGGCCGCGATGTACCTGTCGCGCAGCGCCAAG CAGGTCACGATCGTCAGCAGGCGCCGGCTCGAGGACTCGATGTCGCACTACCTGATCCAGCAGATCAGGGCCAACGACAA GATCCGGGAGCTGCCGAACACCGTCGTGCACGCGGTCAAGGGCGACGGCCACCTCGAGGGCATCTGCCTGGAGAACACCC TGACCGGGGCGCGCGAGGAGCACCACTGCGGCCGCATGTTCATCTTCATCGGCGCCGAACCGCGCACCGACTGGCTCGAC GGCATCGTGGTCCGCGACGACCACGGGTTCATCCTGGCCGGGCCCGATCTGCGCGACGTCTCGGGCTGGATGCTGGACCG CCCGCCGCACCACCTGGAAACAAGTGTGCCGGGTGTTTTTGTTGCAGGTGATGTGCGCGCGGAATCCGCCAAACGGGTGG CCGCCGCCGTCGGCGAAGGATCGATGGCGGTGATGCTGGTGCACCGGTATCTGGCGGAAGCCTGA
Upstream 100 bases:
>100_bases AACGCGTACACGGCCTCCGGCTCCCGCGCCACGTACACCGAATCGGAGTATTGGAGATCGACCACGGGTCGAAGCCTAAG ACGGCGCATACTTGATCGCG
Downstream 100 bases:
>100_bases AAGGGGTCACGATGGGCGAGACATGCCTGCGCGACGAACTGCGCACCCTGTTCCTGTTCGAGGCGCTCTCCGACGAACAA CTCGACATGCTGTGCGCCGA
Product: response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MTGPTAVPRKPVILTVDDDPAVSRAVARDLRRHYGETFRIVRAESGPDALETLNELKLRGETVAVFVADYRMPQMSGIEF LEEAMDLYPMARRVLLTAYADTHAAIDAINVVDLDHYLLKPWDPPEEKLYPVIDALIEAWRATGDRAIPHTKIIGHPWNA RSSEVREFLARNRLYYTWFRADEAKGRQLLEAAGQDGMTLPVVITEQGETLVDPSDAELGATLGLTTTPAEDFYDLVVIG GGPAGLAAAVYGASEGLKTVLIERTATGGQAGQSSRIENYLGFPDGLSGSQLAERARRQAEKFDAELITAAEVTALEVDG SARTVRLSDGRSIGARAVILAMGVEYRQLPAEGCDGLTGAGVYYGATSSVAADCEDDEVYVIGGANSAGQAAMYLSRSAK QVTIVSRRRLEDSMSHYLIQQIRANDKIRELPNTVVHAVKGDGHLEGICLENTLTGAREEHHCGRMFIFIGAEPRTDWLD GIVVRDDHGFILAGPDLRDVSGWMLDRPPHHLETSVPGVFVAGDVRAESAKRVAAAVGEGSMAVMLVHRYLAEA
Sequences:
>Translated_554_residues MTGPTAVPRKPVILTVDDDPAVSRAVARDLRRHYGETFRIVRAESGPDALETLNELKLRGETVAVFVADYRMPQMSGIEF LEEAMDLYPMARRVLLTAYADTHAAIDAINVVDLDHYLLKPWDPPEEKLYPVIDALIEAWRATGDRAIPHTKIIGHPWNA RSSEVREFLARNRLYYTWFRADEAKGRQLLEAAGQDGMTLPVVITEQGETLVDPSDAELGATLGLTTTPAEDFYDLVVIG GGPAGLAAAVYGASEGLKTVLIERTATGGQAGQSSRIENYLGFPDGLSGSQLAERARRQAEKFDAELITAAEVTALEVDG SARTVRLSDGRSIGARAVILAMGVEYRQLPAEGCDGLTGAGVYYGATSSVAADCEDDEVYVIGGANSAGQAAMYLSRSAK QVTIVSRRRLEDSMSHYLIQQIRANDKIRELPNTVVHAVKGDGHLEGICLENTLTGAREEHHCGRMFIFIGAEPRTDWLD GIVVRDDHGFILAGPDLRDVSGWMLDRPPHHLETSVPGVFVAGDVRAESAKRVAAAVGEGSMAVMLVHRYLAEA >Mature_553_residues TGPTAVPRKPVILTVDDDPAVSRAVARDLRRHYGETFRIVRAESGPDALETLNELKLRGETVAVFVADYRMPQMSGIEFL EEAMDLYPMARRVLLTAYADTHAAIDAINVVDLDHYLLKPWDPPEEKLYPVIDALIEAWRATGDRAIPHTKIIGHPWNAR SSEVREFLARNRLYYTWFRADEAKGRQLLEAAGQDGMTLPVVITEQGETLVDPSDAELGATLGLTTTPAEDFYDLVVIGG GPAGLAAAVYGASEGLKTVLIERTATGGQAGQSSRIENYLGFPDGLSGSQLAERARRQAEKFDAELITAAEVTALEVDGS ARTVRLSDGRSIGARAVILAMGVEYRQLPAEGCDGLTGAGVYYGATSSVAADCEDDEVYVIGGANSAGQAAMYLSRSAKQ VTIVSRRRLEDSMSHYLIQQIRANDKIRELPNTVVHAVKGDGHLEGICLENTLTGAREEHHCGRMFIFIGAEPRTDWLDG IVVRDDHGFILAGPDLRDVSGWMLDRPPHHLETSVPGVFVAGDVRAESAKRVAAAVGEGSMAVMLVHRYLAEA
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=327, Percent_Identity=31.4984709480122, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI87081763, Length=330, Percent_Identity=30, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320560, Length=336, Percent_Identity=33.0357142857143, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321898, Length=339, Percent_Identity=32.7433628318584, Blast_Score=140, Evalue=5e-34,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 60091; Mature: 59959
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPTAVPRKPVILTVDDDPAVSRAVARDLRRHYGETFRIVRAESGPDALETLNELKLRG CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCC ETVAVFVADYRMPQMSGIEFLEEAMDLYPMARRVLLTAYADTHAAIDAINVVDLDHYLLK CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHCC PWDPPEEKLYPVIDALIEAWRATGDRAIPHTKIIGHPWNARSSEVREFLARNRLYYTWFR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEE ADEAKGRQLLEAAGQDGMTLPVVITEQGETLVDPSDAELGATLGLTTTPAEDFYDLVVIG CCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCEEECCCCCCCCCCEEEEEEC GGPAGLAAAVYGASEGLKTVLIERTATGGQAGQSSRIENYLGFPDGLSGSQLAERARRQA CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH EKFDAELITAAEVTALEVDGSARTVRLSDGRSIGARAVILAMGVEYRQLPAEGCDGLTGA HHHCHHHEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCC GVYYGATSSVAADCEDDEVYVIGGANSAGQAAMYLSRSAKQVTIVSRRRLEDSMSHYLIQ CEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH QIRANDKIRELPNTVVHAVKGDGHLEGICLENTLTGAREEHHCGRMFIFIGAEPRTDWLD HHHCCCHHHHCCHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC GIVVRDDHGFILAGPDLRDVSGWMLDRPPHHLETSVPGVFVAGDVRAESAKRVAAAVGEG CEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCC SMAVMLVHRYLAEA CHHHHHHHHHHHCC >Mature Secondary Structure TGPTAVPRKPVILTVDDDPAVSRAVARDLRRHYGETFRIVRAESGPDALETLNELKLRG CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCC ETVAVFVADYRMPQMSGIEFLEEAMDLYPMARRVLLTAYADTHAAIDAINVVDLDHYLLK CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHCC PWDPPEEKLYPVIDALIEAWRATGDRAIPHTKIIGHPWNARSSEVREFLARNRLYYTWFR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEE ADEAKGRQLLEAAGQDGMTLPVVITEQGETLVDPSDAELGATLGLTTTPAEDFYDLVVIG CCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCEEECCCCCCCCCCEEEEEEC GGPAGLAAAVYGASEGLKTVLIERTATGGQAGQSSRIENYLGFPDGLSGSQLAERARRQA CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH EKFDAELITAAEVTALEVDGSARTVRLSDGRSIGARAVILAMGVEYRQLPAEGCDGLTGA HHHCHHHEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCC GVYYGATSSVAADCEDDEVYVIGGANSAGQAAMYLSRSAKQVTIVSRRRLEDSMSHYLIQ CEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH QIRANDKIRELPNTVVHAVKGDGHLEGICLENTLTGAREEHHCGRMFIFIGAEPRTDWLD HHHCCCHHHHCCHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC GIVVRDDHGFILAGPDLRDVSGWMLDRPPHHLETSVPGVFVAGDVRAESAKRVAAAVGEG CEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCC SMAVMLVHRYLAEA CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9795994 [H]