Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
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Accession | NC_008704 |
Length | 216,763 |
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The map label for this gene is bedC2 [H]
Identifier: 119855232
GI number: 119855232
Start: 54307
End: 54864
Strand: Reverse
Name: bedC2 [H]
Synonym: Mkms_5846
Alternate gene names: 119855232
Gene position: 54864-54307 (Counterclockwise)
Preceding gene: 119855233
Following gene: 119855231
Centisome position: 25.31
GC content: 60.39
Gene sequence:
>558_bases GTGAGTGCAACGGGCGACGAAATTTCCACGAGGCAGGACGCGGTAGAAAAGTTGCTGCTACAGGCCGAAATCGCCGACTT TCTTTATCGGGAAGCCGACCTGCTCGACGAACGACGTTACTCCGAATGGCTCGGTCTGCTCACCGACGACTACGAGTACT CCGTTCCACTGCGGACGAACGTGGCGTACGACGACCTCGCGCAGCTGGAACAGACTCAGCAAGGTCGCGACATCTGCTGG TTCGACGAGAAAAAGGAGACCGTCGCTTTGCGGGTGGAGCAGCTGATGACTGGCCTGCACTGGGCCGAAGAACCCGTCTC GCGAGTGTCACACCTCGTCACCAACGTGCGTATCGAGGCGGTAGAAGACGCGGAAGTCGAGGTGAGCTGCCGCTTCCTGG TGTACCGGAATCGGGTCACCGATGAAACGGATTTTCTGGTCGGCCGCCGCAGGGACCGGTTGCGGCGCAGTGTGGCTGGC GATTGGCAACTGTGTCGTCGCCGGCTACTCCTGGACCAGGCGGTGCTGCTTGCCAAGAACCTCTCGATCATCCTGTGA
Upstream 100 bases:
>100_bases ATGCACGCGCCTTTTACCGGCGATGGGCCGAGTTCACCGACAACCTCTCGTGGCCCCTACTCATCGAACTCGCCAAATCC GACGAGAGAGCCGCACGGTC
Downstream 100 bases:
>100_bases AAATGCCTCCCAATCTTTGACCCTTGACCATCAGGGGTTAAGAATATAGCGTTCCCTAAATATCCTTTCGCGCCGGACGA CCAAGAAGGAGGCCTCTGGA
Product: 3-phenylpropionate dioxygenase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSATGDEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRTNVAYDDLAQLEQTQQGRDICW FDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEAVEDAEVEVSCRFLVYRNRVTDETDFLVGRRRDRLRRSVAG DWQLCRRRLLLDQAVLLAKNLSIIL
Sequences:
>Translated_185_residues MSATGDEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRTNVAYDDLAQLEQTQQGRDICW FDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEAVEDAEVEVSCRFLVYRNRVTDETDFLVGRRRDRLRRSVAG DWQLCRRRLLLDQAVLLAKNLSIIL >Mature_184_residues SATGDEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRTNVAYDDLAQLEQTQQGRDICWF DEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEAVEDAEVEVSCRFLVYRNRVTDETDFLVGRRRDRLRRSVAGD WQLCRRRLLLDQAVLLAKNLSIIL
Specific function: The beta subunit may be responsible for the substrate specificity of the enzyme [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788889, Length=172, Percent_Identity=35.4651162790698, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.3 [H]
Molecular weight: Translated: 21606; Mature: 21475
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATGDEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRTN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEECC VAYDDLAQLEQTQQGRDICWFDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEA CCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VEDAEVEVSCRFLVYRNRVTDETDFLVGRRRDRLRRSVAGDWQLCRRRLLLDQAVLLAKN ECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC LSIIL CHHCC >Mature Secondary Structure SATGDEISTRQDAVEKLLLQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEECC VAYDDLAQLEQTQQGRDICWFDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEA CCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VEDAEVEVSCRFLVYRNRVTDETDFLVGRRRDRLRRSVAGDWQLCRRRLLLDQAVLLAKN ECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC LSIIL CHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344526 [H]