Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119855027
Identifier: 119855027
GI number: 119855027
Start: 145962
End: 147104
Strand: Direct
Name: 119855027
Synonym: Mkms_5635
Alternate gene names: NA
Gene position: 145962-147104 (Clockwise)
Preceding gene: 119855026
Following gene: 119855028
Centisome position: 48.32
GC content: 63.6
Gene sequence:
>1143_bases TTGAGTGCCCTGCGCGCAGTGAGACCATTTTGCATCGACGTCGCTGATGACGTTCTCGACGATCTACGAACGCGTCTTTC GCGGACCCGTTGGCCGGAAGCCGAATGTGTACCGGACTGGACCCAGGGCATCCCGCTCGGGTACACCCGCGAACTGGCCG CCTATTGGGCCGACGGATACGACTGGCGGTCCCGTGAAGCCGCCCTCAACCGATTCGATCAGTTCGTCGTCGAAATCGAC GGCGTGGACATCCATTTCATCCACCAGCGATCTCCGCACCAAGAGGCTTTTCCGCTGGTGATCACCCACGGCTGGCCCGG CTCGATCGTGGAGTTTCACAACGTGATCGAGCCGCTGACCAACCCGACTGCCCACGGGGGACGGGCCGAGGACGCCTTCC ACGTGGTGTGCCCGGCGCTTCCGGGCTACGGTTTCTCCGGCAAGCCCACCAACGCCGGCTGGGGTGTCGGGAAGATCGCG CAGGCCTGGGAGACGCTCATGCTGCGCCTTGGCTACCAGCGCTACGGCGCCCAGGGCGGGGACTGGGGCGCAGCGATCAC CACACAAATGGGCCGCAACCGCGGCCACTGCGCCGCCATCCATCTGAATATGCCGATCGCTTACCCTCCAGCGGGCGGCA TCACCGATCCGACCGAGGAAGAACAGCTGGCCCTGGCCGCCCTGACGACTTATCAGCGTTGGGAGACAGGCTATTCCGAG CAGCAGTCCACCCGGCCTCAGACCGTCGGCTACGGACTGGCCGATTCGCCGGTCGGTCAGATGGCCTGGATCGTCGAGAA ATTCGCAGCGTGGATGGACTGCGACGGCCATCCCGAGAACGTGCTCAGCCGCGATGAGCTCCTCGACAACGTCATGATGT ACTGGGCTACCAATAGTGGCTCCTCCTCGGCCCGGTTGTACTGGGAGAGCTTCAAGACCCTGGACGCGACAACTCGTGTG GAATTGCCCACTGGTATTGCTGCCTTCCCCAAGGAGGTCCTGCGCGCACCGCGAAGTTGGTGCGAACCGATCTACAACAT CACCCATTGGACGACCATGCCGCGCGGCGGGCACTTCGCCGCTCTGGAACAACCGAGGCTCTTCGTCGACGACATCCGCG CATTCTTCGAATCCGTGCGGTGA
Upstream 100 bases:
>100_bases TGGTTGATATCGGGTTTCGAGCCGAAATGAGCACCATCCCAACTTCAAGGTCGGCTGGTGGCCCCCGAGTCCGCCGATAG CAGCGTGTGAGGAGTGACCT
Downstream 100 bases:
>100_bases TGCGGCCAGCCGGCAGGCAACGAAGCTTTGGGAGCACGCTTTCGATGAGCTAAACTTTCTGTATTGCGGAGATATTATCT GCTAGCAAGAGGATGCCCGC
Product: epocide hydrolase domain-containing protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSALRAVRPFCIDVADDVLDDLRTRLSRTRWPEAECVPDWTQGIPLGYTRELAAYWADGYDWRSREAALNRFDQFVVEID GVDIHFIHQRSPHQEAFPLVITHGWPGSIVEFHNVIEPLTNPTAHGGRAEDAFHVVCPALPGYGFSGKPTNAGWGVGKIA QAWETLMLRLGYQRYGAQGGDWGAAITTQMGRNRGHCAAIHLNMPIAYPPAGGITDPTEEEQLALAALTTYQRWETGYSE QQSTRPQTVGYGLADSPVGQMAWIVEKFAAWMDCDGHPENVLSRDELLDNVMMYWATNSGSSSARLYWESFKTLDATTRV ELPTGIAAFPKEVLRAPRSWCEPIYNITHWTTMPRGGHFAALEQPRLFVDDIRAFFESVR
Sequences:
>Translated_380_residues MSALRAVRPFCIDVADDVLDDLRTRLSRTRWPEAECVPDWTQGIPLGYTRELAAYWADGYDWRSREAALNRFDQFVVEID GVDIHFIHQRSPHQEAFPLVITHGWPGSIVEFHNVIEPLTNPTAHGGRAEDAFHVVCPALPGYGFSGKPTNAGWGVGKIA QAWETLMLRLGYQRYGAQGGDWGAAITTQMGRNRGHCAAIHLNMPIAYPPAGGITDPTEEEQLALAALTTYQRWETGYSE QQSTRPQTVGYGLADSPVGQMAWIVEKFAAWMDCDGHPENVLSRDELLDNVMMYWATNSGSSSARLYWESFKTLDATTRV ELPTGIAAFPKEVLRAPRSWCEPIYNITHWTTMPRGGHFAALEQPRLFVDDIRAFFESVR >Mature_379_residues SALRAVRPFCIDVADDVLDDLRTRLSRTRWPEAECVPDWTQGIPLGYTRELAAYWADGYDWRSREAALNRFDQFVVEIDG VDIHFIHQRSPHQEAFPLVITHGWPGSIVEFHNVIEPLTNPTAHGGRAEDAFHVVCPALPGYGFSGKPTNAGWGVGKIAQ AWETLMLRLGYQRYGAQGGDWGAAITTQMGRNRGHCAAIHLNMPIAYPPAGGITDPTEEEQLALAALTTYQRWETGYSEQ QSTRPQTVGYGLADSPVGQMAWIVEKFAAWMDCDGHPENVLSRDELLDNVMMYWATNSGSSSARLYWESFKTLDATTRVE LPTGIAAFPKEVLRAPRSWCEPIYNITHWTTMPRGGHFAALEQPRLFVDDIRAFFESVR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=406, Percent_Identity=36.9458128078818, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI209862837, Length=406, Percent_Identity=36.9458128078818, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17564944, Length=405, Percent_Identity=35.5555555555556, Blast_Score=247, Evalue=7e-66, Organism=Caenorhabditis elegans, GI193207462, Length=410, Percent_Identity=26.3414634146341, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24655327, Length=412, Percent_Identity=32.5242718446602, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI20130139, Length=399, Percent_Identity=32.8320802005013, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI19922580, Length=404, Percent_Identity=31.4356435643564, Blast_Score=191, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 42616; Mature: 42485
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRAVRPFCIDVADDVLDDLRTRLSRTRWPEAECVPDWTQGIPLGYTRELAAYWADGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCC DWRSREAALNRFDQFVVEIDGVDIHFIHQRSPHQEAFPLVITHGWPGSIVEFHNVIEPLT CCCHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC NPTAHGGRAEDAFHVVCPALPGYGFSGKPTNAGWGVGKIAQAWETLMLRLGYQRYGAQGG CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC DWGAAITTQMGRNRGHCAAIHLNMPIAYPPAGGITDPTEEEQLALAALTTYQRWETGYSE CCCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH QQSTRPQTVGYGLADSPVGQMAWIVEKFAAWMDCDGHPENVLSRDELLDNVMMYWATNSG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCC SSSARLYWESFKTLDATTRVELPTGIAAFPKEVLRAPRSWCEPIYNITHWTTMPRGGHFA CCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCEE ALEQPRLFVDDIRAFFESVR ECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SALRAVRPFCIDVADDVLDDLRTRLSRTRWPEAECVPDWTQGIPLGYTRELAAYWADGY CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCC DWRSREAALNRFDQFVVEIDGVDIHFIHQRSPHQEAFPLVITHGWPGSIVEFHNVIEPLT CCCHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC NPTAHGGRAEDAFHVVCPALPGYGFSGKPTNAGWGVGKIAQAWETLMLRLGYQRYGAQGG CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC DWGAAITTQMGRNRGHCAAIHLNMPIAYPPAGGITDPTEEEQLALAALTTYQRWETGYSE CCCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH QQSTRPQTVGYGLADSPVGQMAWIVEKFAAWMDCDGHPENVLSRDELLDNVMMYWATNSG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCC SSSARLYWESFKTLDATTRVELPTGIAAFPKEVLRAPRSWCEPIYNITHWTTMPRGGHFA CCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCEE ALEQPRLFVDDIRAFFESVR ECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]