Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119855026
Identifier: 119855026
GI number: 119855026
Start: 145321
End: 145941
Strand: Direct
Name: 119855026
Synonym: Mkms_5634
Alternate gene names: NA
Gene position: 145321-145941 (Clockwise)
Preceding gene: 119855025
Following gene: 119855027
Centisome position: 48.11
GC content: 61.67
Gene sequence:
>621_bases GTGAAGGGCTTTTCGCTCCGTAGCAAGGTTGAGAACCTCCCGACAGCGGCTGACGTCAAAGCTCTGAAACCACTCAGCAT CATTGGCGGGCTCTACGCGATGACGCTGGACATGTTCGTCGCGATGGTCAAACCACCCTTCCAATGGCGCGAGTTCCTCC TCCAAACGTGGTTCGTGGCGCGGGTTTCCATGGTGCCCGCGCTGACGTTGTCGATTCCCCTCGTTGTCCTCACGTCATTC ACCTTCAACACGCTGCTCGCCGAATTCGGCGCCGCAGACTTCTCCGGAACCGGCGCAGCATTGGGCGCGGTCAACCAGAT CGGCCCCTTCGTGACCGTCCTCGTCGTCGCCGGTGCCGGCGCGGGCGCAGCAGCAACGAATCTCAGCCACCGCCAGGGTG TCAGCCGCCGCCTCCGTCTCCGTAAGCAAGAACCGTGCTATCGTCATGGTGTTCGTCGACCAAACCACCACTGTGGGCAA AGACGCGCCGACAGAGACCGACTCCGTAGTCCAGGTCAGCCTCGACAAGGTCGGATCCCACTGGTTGATATCGGGTTTCG AGCCGAAATGAGCACCATCCCAACTTCAAGGTCGGCTGGTGGCCCCCGAGTCCGCCGATAG
Upstream 100 bases:
>100_bases CATCGACGCATTTCGGCCGTGCTGTTGGGGTAGGCCTAGCCACGGTGAGGGAGATTCCGGTCCCGGAGTCGCACCTCAGC AACCTTATGGGGGCTTCTGA
Downstream 100 bases:
>100_bases CAGCGTGTGAGGAGTGACCTTTGAGTGCCCTGCGCGCAGTGAGACCATTTTGCATCGACGTCGCTGATGACGTTCTCGAC GATCTACGAACGCGTCTTTC
Product: ABC-type transport system involved in resistance to organic solvents permease component-like protein
Products: NA
Alternate protein names: ABC-Transporter Integral Membrane Protein; Integral Membrane A; TrnB1 Protein; ABC Transport System Permease Protein; Membrane A; Integral Membrane Protein; Integral Membrane
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKGFSLRSKVENLPTAADVKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSF TFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGAGAAATNLSHRQGVSRRLRLRKQEPCYRHGVRRPNHHCGQ RRADRDRLRSPGQPRQGRIPLVDIGFRAEMSTIPTSRSAGGPRVRR
Sequences:
>Translated_206_residues MKGFSLRSKVENLPTAADVKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSF TFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGAGAAATNLSHRQGVSRRLRLRKQEPCYRHGVRRPNHHCGQ RRADRDRLRSPGQPRQGRIPLVDIGFRAEMSTIPTSRSAGGPRVRR >Mature_206_residues MKGFSLRSKVENLPTAADVKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSF TFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGAGAAATNLSHRQGVSRRLRLRKQEPCYRHGVRRPNHHCGQ RRADRDRLRSPGQPRQGRIPLVDIGFRAEMSTIPTSRSAGGPRVRR
Specific function: Unknown
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22477; Mature: 22477
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFSLRSKVENLPTAADVKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVA CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVSMVPALTLSIPLVVLTSFTFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AGAAATNLSHRQGVSRRLRLRKQEPCYRHGVRRPNHHCGQRRADRDRLRSPGQPRQGRIP CCHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCC LVDIGFRAEMSTIPTSRSAGGPRVRR EEECCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKGFSLRSKVENLPTAADVKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVA CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVSMVPALTLSIPLVVLTSFTFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AGAAATNLSHRQGVSRRLRLRKQEPCYRHGVRRPNHHCGQRRADRDRLRSPGQPRQGRIP CCHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCC LVDIGFRAEMSTIPTSRSAGGPRVRR EEECCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA