Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854950
Identifier: 119854950
GI number: 119854950
Start: 64625
End: 66574
Strand: Direct
Name: 119854950
Synonym: Mkms_5556
Alternate gene names: NA
Gene position: 64625-66574 (Clockwise)
Preceding gene: 119854949
Following gene: 119854951
Centisome position: 21.39
GC content: 59.64
Gene sequence:
>1950_bases GTGGGTAAAGGGGCGCGAATCCGACGCGAGCGTGCCGCGAAAAGCGAGCAGAAGAGCCAGCAGAACGGCGCCGGCAACGC CGGACCCATGCCAAAGGCCGGCACCAACGGCTCGTTGCCGCCGTGGATGCCTCTACCTGCTGCGGGTTTCGGTAGTGGCG GGGGCGGCGGTGACCCCATTTCGCAGCTGATGGGTTTCCTTGGCACACAGGGGCAGTTGATGGTCTGCGGGCATTTCGGC CTCACGCCACTTTCTGGCGAGCAACGGCGCGACCTGCTCGCCGACGTCAACCTCTACGACGCGCTCGAAACTGTCGCACG CCTACAGGGACAGTGGGACGTGGCCTACACCACCACGCAGGACGTCCAACTCGTCGAAGGCGATTTCCTCGCCGCCGGGG GCAGCGGCGGCGTGTGCGAGAAAGCCGTGAACCGCATGATCACTTACAACGATCACCTTGTGTCTCCACGGGCCACCGCT CAGCTGCAGCGCGAGATTATTGAGTACGCATCGCCGGATGAGGCGGCACCACCGATTGAGCGAAATACGCTGGTGTACCT ACTGTTGTCGATTACATCCGAACAGAATTCGGACGAAGAATTCGCGGGCGACGTGCCCACCGACGCCGAAAAGGCCAAGC TCTGGGAAAAACTGCCGAAGATGAACCTTGAGGAAACCCACGAGTACGCCAAGCCTCATATCCAAAATGAAATTGCGTCG TCACTATTCAATCAGCCGCTGAAATATGAGATCGCGCTTTCGAACACCTACGACCTGTGGTTCACACAGTGGGCACCGAA ATCGAACACCAAAGGGTTGGGCGCCACGCCCGCCGAGTCGTTCAAGATTGCGTCAGGTGTCGAACTGCTCGACGTGATGC GTCTCGGCGCCCGAATCATCAAGCGCAGCAGAAATACCCATCAGATCCGATTCACCCGCCAGGAGCTGCTCGCCGCCGGC GCCGCCGAGGGCGCCATCGACTTGTTGTTCGCCAACATGGCAAGGCCGTTGGACCAGTACAGGATCGAGCTGGAAGGCGA TCGCAAAAAGGGAGCGATCGGCAATCAGCGCTACACGCTGACGCGATTTCCCTTCCTGACGGTCGACGACAACACCGTGG TGATGCTGCGTCATCAATGGGCGATCGATCGGCTGTGCGGCTCGCAACTCTATTTCGAGGCGTGGGCTAGCTTGAGCACC AGAAGCCTCCAAAATCGGTTCAAGACCGCCATGTGCGACGCGTTCGAGATCTTCGTCGGCGGGATTTTGCACCGCATCGT CAGCAAGTGCCCGCACCTAACCACAATCGTCGGTGAAAGCGATATGCAGTCCGCGTGGACGAAGAAGGAGACGCCTTCGC TGTGCGACTGGATGATTTTCGGTAAAGAACACTGCATCGTGATCGACGCGACCAACCACGCGCTGAAAGACAAAGCGGCA CAGGGGCTGGCGACATGGGACGAGTACAGCGCCGAGGTCGAGCAGATCTTCGCCGACGCCAGTAAGGGCAAGTTCAGGCA GCTGCTTTCGACAATCGACCTCGTCAAAGAACACGGAGGCTGGAAGAACGAGAAGGTCGACACGAAGACGATGTACACCC CGCTCGTCATCGTGCCCGACGCCGGCGTGGTCAACGGGCTGCTCACCCAGTTCGACATCACTCTGCGTGGCTATAAGGCC TTCAAGCATCTTTCGCCCCAGGTGTACGCCCCCGGCATCGTCCCGATATCCGACCTCCAGCTGCTTGAAGGGATGGCCGA TATGGGGGCGACGTGGGGCAGCAATCCCAACATGATCGAGCTGATCGCGAACTGGCGCGCGAAGGCATCGAAGTACGGGA TGGCGTCATTGCAGCTGTACTTGCTTAGCTCAGGGTTTCCCTTCCTGCCGCCTAGCCATCACATCGTGAAGACCAGTAGC AAGGTGATCAAGCTGCTCGACGGGAGCTAA
Upstream 100 bases:
>100_bases AGGCTGGCCGCGCTACGGCGGTCGATACGCGAACAGGGCAGGCGACCCCGTCGAGCCGTTAGATGCGACGGGCTGCTCGA TAAGAGAGGTCTGAATTCCG
Downstream 100 bases:
>100_bases ATCCGCGGCTGGGGCTGATACCCACGATTCGCCACGTAAATGAGACCAGACTGTTCGCCGCAACATTTGAGACACCTGCA AATCCTCTGGCCAGACGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MGKGARIRRERAAKSEQKSQQNGAGNAGPMPKAGTNGSLPPWMPLPAAGFGSGGGGGDPISQLMGFLGTQGQLMVCGHFG LTPLSGEQRRDLLADVNLYDALETVARLQGQWDVAYTTTQDVQLVEGDFLAAGGSGGVCEKAVNRMITYNDHLVSPRATA QLQREIIEYASPDEAAPPIERNTLVYLLLSITSEQNSDEEFAGDVPTDAEKAKLWEKLPKMNLEETHEYAKPHIQNEIAS SLFNQPLKYEIALSNTYDLWFTQWAPKSNTKGLGATPAESFKIASGVELLDVMRLGARIIKRSRNTHQIRFTRQELLAAG AAEGAIDLLFANMARPLDQYRIELEGDRKKGAIGNQRYTLTRFPFLTVDDNTVVMLRHQWAIDRLCGSQLYFEAWASLST RSLQNRFKTAMCDAFEIFVGGILHRIVSKCPHLTTIVGESDMQSAWTKKETPSLCDWMIFGKEHCIVIDATNHALKDKAA QGLATWDEYSAEVEQIFADASKGKFRQLLSTIDLVKEHGGWKNEKVDTKTMYTPLVIVPDAGVVNGLLTQFDITLRGYKA FKHLSPQVYAPGIVPISDLQLLEGMADMGATWGSNPNMIELIANWRAKASKYGMASLQLYLLSSGFPFLPPSHHIVKTSS KVIKLLDGS
Sequences:
>Translated_649_residues MGKGARIRRERAAKSEQKSQQNGAGNAGPMPKAGTNGSLPPWMPLPAAGFGSGGGGGDPISQLMGFLGTQGQLMVCGHFG LTPLSGEQRRDLLADVNLYDALETVARLQGQWDVAYTTTQDVQLVEGDFLAAGGSGGVCEKAVNRMITYNDHLVSPRATA QLQREIIEYASPDEAAPPIERNTLVYLLLSITSEQNSDEEFAGDVPTDAEKAKLWEKLPKMNLEETHEYAKPHIQNEIAS SLFNQPLKYEIALSNTYDLWFTQWAPKSNTKGLGATPAESFKIASGVELLDVMRLGARIIKRSRNTHQIRFTRQELLAAG AAEGAIDLLFANMARPLDQYRIELEGDRKKGAIGNQRYTLTRFPFLTVDDNTVVMLRHQWAIDRLCGSQLYFEAWASLST RSLQNRFKTAMCDAFEIFVGGILHRIVSKCPHLTTIVGESDMQSAWTKKETPSLCDWMIFGKEHCIVIDATNHALKDKAA QGLATWDEYSAEVEQIFADASKGKFRQLLSTIDLVKEHGGWKNEKVDTKTMYTPLVIVPDAGVVNGLLTQFDITLRGYKA FKHLSPQVYAPGIVPISDLQLLEGMADMGATWGSNPNMIELIANWRAKASKYGMASLQLYLLSSGFPFLPPSHHIVKTSS KVIKLLDGS >Mature_648_residues GKGARIRRERAAKSEQKSQQNGAGNAGPMPKAGTNGSLPPWMPLPAAGFGSGGGGGDPISQLMGFLGTQGQLMVCGHFGL TPLSGEQRRDLLADVNLYDALETVARLQGQWDVAYTTTQDVQLVEGDFLAAGGSGGVCEKAVNRMITYNDHLVSPRATAQ LQREIIEYASPDEAAPPIERNTLVYLLLSITSEQNSDEEFAGDVPTDAEKAKLWEKLPKMNLEETHEYAKPHIQNEIASS LFNQPLKYEIALSNTYDLWFTQWAPKSNTKGLGATPAESFKIASGVELLDVMRLGARIIKRSRNTHQIRFTRQELLAAGA AEGAIDLLFANMARPLDQYRIELEGDRKKGAIGNQRYTLTRFPFLTVDDNTVVMLRHQWAIDRLCGSQLYFEAWASLSTR SLQNRFKTAMCDAFEIFVGGILHRIVSKCPHLTTIVGESDMQSAWTKKETPSLCDWMIFGKEHCIVIDATNHALKDKAAQ GLATWDEYSAEVEQIFADASKGKFRQLLSTIDLVKEHGGWKNEKVDTKTMYTPLVIVPDAGVVNGLLTQFDITLRGYKAF KHLSPQVYAPGIVPISDLQLLEGMADMGATWGSNPNMIELIANWRAKASKYGMASLQLYLLSSGFPFLPPSHHIVKTSSK VIKLLDGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71485; Mature: 71354
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKGARIRRERAAKSEQKSQQNGAGNAGPMPKAGTNGSLPPWMPLPAAGFGSGGGGGDPI CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SQLMGFLGTQGQLMVCGHFGLTPLSGEQRRDLLADVNLYDALETVARLQGQWDVAYTTTQ HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCC DVQLVEGDFLAAGGSGGVCEKAVNRMITYNDHLVSPRATAQLQREIIEYASPDEAAPPIE CCEEECCCEEEECCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC RNTLVYLLLSITSEQNSDEEFAGDVPTDAEKAKLWEKLPKMNLEETHEYAKPHIQNEIAS CCCEEEEEEEHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH SLFNQPLKYEIALSNTYDLWFTQWAPKSNTKGLGATPAESFKIASGVELLDVMRLGARII HHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCHHCCCHHCCHHHHHHHHHHHHHH KRSRNTHQIRFTRQELLAAGAAEGAIDLLFANMARPLDQYRIELEGDRKKGAIGNQRYTL HCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCEEE TRFPFLTVDDNTVVMLRHQWAIDRLCGSQLYFEAWASLSTRSLQNRFKTAMCDAFEIFVG EECCEEEECCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILHRIVSKCPHLTTIVGESDMQSAWTKKETPSLCDWMIFGKEHCIVIDATNHALKDKAA HHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCHHHHHEECCCEEEEEECCCHHHHHHHH QGLATWDEYSAEVEQIFADASKGKFRQLLSTIDLVKEHGGWKNEKVDTKTMYTPLVIVPD CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEECC AGVVNGLLTQFDITLRGYKAFKHLSPQVYAPGIVPISDLQLLEGMADMGATWGSNPNMIE CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE LIANWRAKASKYGMASLQLYLLSSGFPFLPPSHHIVKTSSKVIKLLDGS EHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCEEECHHHHHHCCCCC >Mature Secondary Structure GKGARIRRERAAKSEQKSQQNGAGNAGPMPKAGTNGSLPPWMPLPAAGFGSGGGGGDPI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH SQLMGFLGTQGQLMVCGHFGLTPLSGEQRRDLLADVNLYDALETVARLQGQWDVAYTTTQ HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCC DVQLVEGDFLAAGGSGGVCEKAVNRMITYNDHLVSPRATAQLQREIIEYASPDEAAPPIE CCEEECCCEEEECCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC RNTLVYLLLSITSEQNSDEEFAGDVPTDAEKAKLWEKLPKMNLEETHEYAKPHIQNEIAS CCCEEEEEEEHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH SLFNQPLKYEIALSNTYDLWFTQWAPKSNTKGLGATPAESFKIASGVELLDVMRLGARII HHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCHHCCCHHCCHHHHHHHHHHHHHH KRSRNTHQIRFTRQELLAAGAAEGAIDLLFANMARPLDQYRIELEGDRKKGAIGNQRYTL HCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCEEE TRFPFLTVDDNTVVMLRHQWAIDRLCGSQLYFEAWASLSTRSLQNRFKTAMCDAFEIFVG EECCEEEECCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILHRIVSKCPHLTTIVGESDMQSAWTKKETPSLCDWMIFGKEHCIVIDATNHALKDKAA HHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCHHHHHEECCCEEEEEECCCHHHHHHHH QGLATWDEYSAEVEQIFADASKGKFRQLLSTIDLVKEHGGWKNEKVDTKTMYTPLVIVPD CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEEECC AGVVNGLLTQFDITLRGYKAFKHLSPQVYAPGIVPISDLQLLEGMADMGATWGSNPNMIE CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE LIANWRAKASKYGMASLQLYLLSSGFPFLPPSHHIVKTSSKVIKLLDGS EHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCEEECHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA