Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854947
Identifier: 119854947
GI number: 119854947
Start: 62043
End: 62642
Strand: Reverse
Name: 119854947
Synonym: Mkms_5553
Alternate gene names: NA
Gene position: 62642-62043 (Counterclockwise)
Preceding gene: 119854952
Following gene: 119854946
Centisome position: 20.74
GC content: 69.17
Gene sequence:
>600_bases GTGAGTACCCAGGCACACCATGAACAGGCCAGCCTCTTCAGCGACGACACCAGCACACGCCGCCACCCCCGGCATGTGCT GTCATACGGCCTCGGATTGGACAGCACGGCGGTCCTACTGCGCTGGCTCACCGACCCGTCCAGCCGCGACTTCGACCTAT CCGACCTGGTGGTCATCACCGCCATGACCGGAGACGAGTTCAGTGCCACCGGCGCCGACGTCGAGCGCTACGTGCTCCCC GAGCTGCGTCGCCACCGGGTCCGGTTCGTCCAGGTCGGCCGCCACCAGCTGCTCACCACCGCCGCCGGCGAGGGCATCAC CACCTTCAGCGACACCACCGAACCGGACCGACTCTTCGTCGAGGGGGCCTACGCGCTGTCGACGGAGATGCTCACCGCCG GCACCCTGCCGCAGCGCGGCGGTGCCCGCAAATGCAGCGCCCGAGCCAAGGGCGCGGTCCTCGACCCGGTGATCGCCCGA CTGACCGGCGGGCAGCCCTATCAGCATTACGTCGGTTTCGAGGTCGACGAGATGGGCCGCGCCGAGCGCGACGCCGCCTA CAACACAGCAGCCCGAACGGGCCGCTACCCCCTTGAGTGA
Upstream 100 bases:
>100_bases TCACCCGGGACCTGCCCCGCCCGGACCTTTGCACTCCACGGCCCTCTACCGGCCCAAATCTCCAGTGCCAGAAGGCAAAA AGAACGGGCGGGAGACCCCA
Downstream 100 bases:
>100_bases GTTGCCTCGGGTTCACCTGATGTCGTCGCGATCGTTGCCAGCCGCAATTAACTCCCAATCAGCGCCGATGTCGACGCGTA CCGTTCCGTCCGCGATTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSTQAHHEQASLFSDDTSTRRHPRHVLSYGLGLDSTAVLLRWLTDPSSRDFDLSDLVVITAMTGDEFSATGADVERYVLP ELRRHRVRFVQVGRHQLLTTAAGEGITTFSDTTEPDRLFVEGAYALSTEMLTAGTLPQRGGARKCSARAKGAVLDPVIAR LTGGQPYQHYVGFEVDEMGRAERDAAYNTAARTGRYPLE
Sequences:
>Translated_199_residues MSTQAHHEQASLFSDDTSTRRHPRHVLSYGLGLDSTAVLLRWLTDPSSRDFDLSDLVVITAMTGDEFSATGADVERYVLP ELRRHRVRFVQVGRHQLLTTAAGEGITTFSDTTEPDRLFVEGAYALSTEMLTAGTLPQRGGARKCSARAKGAVLDPVIAR LTGGQPYQHYVGFEVDEMGRAERDAAYNTAARTGRYPLE >Mature_198_residues STQAHHEQASLFSDDTSTRRHPRHVLSYGLGLDSTAVLLRWLTDPSSRDFDLSDLVVITAMTGDEFSATGADVERYVLPE LRRHRVRFVQVGRHQLLTTAAGEGITTFSDTTEPDRLFVEGAYALSTEMLTAGTLPQRGGARKCSARAKGAVLDPVIARL TGGQPYQHYVGFEVDEMGRAERDAAYNTAARTGRYPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21901; Mature: 21769
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQAHHEQASLFSDDTSTRRHPRHVLSYGLGLDSTAVLLRWLTDPSSRDFDLSDLVVIT CCCCCHHHHHHHHCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE AMTGDEFSATGADVERYVLPELRRHRVRFVQVGRHQLLTTAAGEGITTFSDTTEPDRLFV EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEE EGAYALSTEMLTAGTLPQRGGARKCSARAKGAVLDPVIARLTGGQPYQHYVGFEVDEMGR ECHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHCC AERDAAYNTAARTGRYPLE HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STQAHHEQASLFSDDTSTRRHPRHVLSYGLGLDSTAVLLRWLTDPSSRDFDLSDLVVIT CCCCHHHHHHHHCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE AMTGDEFSATGADVERYVLPELRRHRVRFVQVGRHQLLTTAAGEGITTFSDTTEPDRLFV EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEE EGAYALSTEMLTAGTLPQRGGARKCSARAKGAVLDPVIARLTGGQPYQHYVGFEVDEMGR ECHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHCC AERDAAYNTAARTGRYPLE HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA