| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776510
Identifier: 119776510
GI number: 119776510
Start: 4006870
End: 4007697
Strand: Direct
Name: 119776510
Synonym: Sama_3378
Alternate gene names: NA
Gene position: 4006870-4007697 (Clockwise)
Preceding gene: 119776509
Following gene: 119776511
Centisome position: 93.05
GC content: 56.76
Gene sequence:
>828_bases ATGACTGAGCACACCCAAAAGCTTGCGCGCCGCTCGCCCTGTCAGCACCGACTGACCGGACTGGCCTATGTGCCGCGCTG GCTGGGTGGCATGCTGTGCTACATCTGTTTTGGCCTCGGCGGTCTGCTAAGCTCGCTGACTATCTTACCGCTGCTGAAAT ACTGGCCCGGCAAACCCGAGGTTCGCATCAAGCGGGTACAAAAAGCCGTGCACCTGATGTTTCGCGGCTTTGTGCGCATG TTGTCGGCAGCTGGCGTGATAAAACTGGAAACCAAAGAGGTGGAGCGGCTCGCCAATGCCGAAGCCATGCTGGTGATTGC CAACCACCCCACCCTGATTGATGTGGTGGTGTTGATAAGCCTGATGCCCAACGCAGGTTGTATCGTAAAACAGGGGCTTT GGCGCAACCCTTTTATGCGTGGCGTGGTGTCGGCGGCAGGTTATATCCCCAATCGCGGCGCCGAGCTGCTGCTGGATGAT TGCCGCGACGTACTCAGCCGTGGTACCAATCTGATTATCTTCCCCGAAGGCACCCGTACCGTGCTTGGCGAGCAGATAAA CCCCTTTGCGCGTGGCGCGGCCAATATCGCCCTGCGTACCGGCAGTGACATACTTCCTGTGTTGCTGCACACCAAGCCCC CTGGTCTGACCAAACAGGACCCCTGGTGGGAAATTCCCCGGCGCACCATTGGCATGACGGTAGAGGTGGGAACACCCATA TCCGCCATGGACTACAAGGCCGAGGAAGGAGGAGATGCCAGGATGGCGCGGATACTGACCAGGGAAATGGAAAATTATTA TAAACAAAGACTTGAAATAGAATTATGA
Upstream 100 bases:
>100_bases CAAAAGCTAGCGCCCATGAGCTACGGTCAGTTGCTGGCAAGCCTTGCCAAAGGCGAAAACTGCCGGGGCCATCTTTCCGG TTTTGATTGGAGCCTCAATC
Downstream 100 bases:
>100_bases CATTACATGACCAAATCAAACAGCTGATCATCGACTGCCTCGACCTGGAAGACGTGACCATTGCTGACATAGAAACCGAT GCGCCCCTGTTCGGCGACGG
Product: acyltransferase family protein
Products: NA
Alternate protein names: 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase; Acyltransferase Family Protein; Phospholipid Biosynthesis Acyltransferase; Transmembrane Acyltransferase; MCP Methyltransferase CheR-Type; 1-Acylglycerol-3-Phosphate O-Acyltransferase; Putative Phospholipid Biosynthesis Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate O-Acyltransferase; Acyltransferase Family
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTEHTQKLARRSPCQHRLTGLAYVPRWLGGMLCYICFGLGGLLSSLTILPLLKYWPGKPEVRIKRVQKAVHLMFRGFVRM LSAAGVIKLETKEVERLANAEAMLVIANHPTLIDVVVLISLMPNAGCIVKQGLWRNPFMRGVVSAAGYIPNRGAELLLDD CRDVLSRGTNLIIFPEGTRTVLGEQINPFARGAANIALRTGSDILPVLLHTKPPGLTKQDPWWEIPRRTIGMTVEVGTPI SAMDYKAEEGGDARMARILTREMENYYKQRLEIEL
Sequences:
>Translated_275_residues MTEHTQKLARRSPCQHRLTGLAYVPRWLGGMLCYICFGLGGLLSSLTILPLLKYWPGKPEVRIKRVQKAVHLMFRGFVRM LSAAGVIKLETKEVERLANAEAMLVIANHPTLIDVVVLISLMPNAGCIVKQGLWRNPFMRGVVSAAGYIPNRGAELLLDD CRDVLSRGTNLIIFPEGTRTVLGEQINPFARGAANIALRTGSDILPVLLHTKPPGLTKQDPWWEIPRRTIGMTVEVGTPI SAMDYKAEEGGDARMARILTREMENYYKQRLEIEL >Mature_274_residues TEHTQKLARRSPCQHRLTGLAYVPRWLGGMLCYICFGLGGLLSSLTILPLLKYWPGKPEVRIKRVQKAVHLMFRGFVRML SAAGVIKLETKEVERLANAEAMLVIANHPTLIDVVVLISLMPNAGCIVKQGLWRNPFMRGVVSAAGYIPNRGAELLLDDC RDVLSRGTNLIIFPEGTRTVLGEQINPFARGAANIALRTGSDILPVLLHTKPPGLTKQDPWWEIPRRTIGMTVEVGTPIS AMDYKAEEGGDARMARILTREMENYYKQRLEIEL
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30698; Mature: 30567
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHTQKLARRSPCQHRLTGLAYVPRWLGGMLCYICFGLGGLLSSLTILPLLKYWPGKPE CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VRIKRVQKAVHLMFRGFVRMLSAAGVIKLETKEVERLANAEAMLVIANHPTLIDVVVLIS HHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCEEEEEECCCHHHHHHHHHH LMPNAGCIVKQGLWRNPFMRGVVSAAGYIPNRGAELLLDDCRDVLSRGTNLIIFPEGTRT HCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHH VLGEQINPFARGAANIALRTGSDILPVLLHTKPPGLTKQDPWWEIPRRTIGMTVEVGTPI HHHCCCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHCCHHHHCEEEECCCCC SAMDYKAEEGGDARMARILTREMENYYKQRLEIEL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEHTQKLARRSPCQHRLTGLAYVPRWLGGMLCYICFGLGGLLSSLTILPLLKYWPGKPE CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VRIKRVQKAVHLMFRGFVRMLSAAGVIKLETKEVERLANAEAMLVIANHPTLIDVVVLIS HHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCEEEEEECCCHHHHHHHHHH LMPNAGCIVKQGLWRNPFMRGVVSAAGYIPNRGAELLLDDCRDVLSRGTNLIIFPEGTRT HCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHH VLGEQINPFARGAANIALRTGSDILPVLLHTKPPGLTKQDPWWEIPRRTIGMTVEVGTPI HHHCCCCHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHCCHHHHCEEEECCCCC SAMDYKAEEGGDARMARILTREMENYYKQRLEIEL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA