| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776511
Identifier: 119776511
GI number: 119776511
Start: 4007694
End: 4007954
Strand: Direct
Name: 119776511
Synonym: Sama_3379
Alternate gene names: NA
Gene position: 4007694-4007954 (Clockwise)
Preceding gene: 119776510
Following gene: 119776512
Centisome position: 93.07
GC content: 50.96
Gene sequence:
>261_bases ATGACATTACATGACCAAATCAAACAGCTGATCATCGACTGCCTCGACCTGGAAGACGTGACCATTGCTGACATAGAAAC CGATGCGCCCCTGTTCGGCGACGGTCTGGGACTTGACTCCATCGATGCCCTCGAACTGGGTCTGGCTATTAAAAAGCAAT TCGATGTAAAGATTGAAGCCAACTCCGACGCGACCAAGGCACACTTCTACAGCGTGGCAACTCTGGCCAGCTTTATCGAA TCTCAGCGTGGTCAGGAGTAA
Upstream 100 bases:
>100_bases CCATGGACTACAAGGCCGAGGAAGGAGGAGATGCCAGGATGGCGCGGATACTGACCAGGGAAATGGAAAATTATTATAAA CAAAGACTTGAAATAGAATT
Downstream 100 bases:
>100_bases GGCTATGGATAATCGCGAGCAAATTCTGGCAAAGCTGACCACCATTCTGGTGGATGATTTTGAAATCGACGCCGATGCCA TCAGCCTCGAAGCCAACCTG
Product: acyl carrier protein
Products: NA
Alternate protein names: Acyl-Carrier Protein; Acyl-Carrier-Protein; Acyl Carrier Domain-Containing Protein; Acyl Carrier Protein Component; Acyl Carrier Protein AcpC; Acyl-Carrier Protein-Like Protein
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTLHDQIKQLIIDCLDLEDVTIADIETDAPLFGDGLGLDSIDALELGLAIKKQFDVKIEANSDATKAHFYSVATLASFIE SQRGQE
Sequences:
>Translated_86_residues MTLHDQIKQLIIDCLDLEDVTIADIETDAPLFGDGLGLDSIDALELGLAIKKQFDVKIEANSDATKAHFYSVATLASFIE SQRGQE >Mature_85_residues TLHDQIKQLIIDCLDLEDVTIADIETDAPLFGDGLGLDSIDALELGLAIKKQFDVKIEANSDATKAHFYSVATLASFIES QRGQE
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9395; Mature: 9263
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHDQIKQLIIDCLDLEDVTIADIETDAPLFGDGLGLDSIDALELGLAIKKQFDVKIEA CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEEEC NSDATKAHFYSVATLASFIESQRGQE CCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLHDQIKQLIIDCLDLEDVTIADIETDAPLFGDGLGLDSIDALELGLAIKKQFDVKIEA CHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEEEC NSDATKAHFYSVATLASFIESQRGQE CCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA