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The map label for this gene is yraM [C]

Identifier: 119776486

GI number: 119776486

Start: 3982242

End: 3984029

Strand: Direct

Name: yraM [C]

Synonym: Sama_3354

Alternate gene names: 119776486

Gene position: 3982242-3984029 (Clockwise)

Preceding gene: 119776484

Following gene: 119776487

Centisome position: 92.48

GC content: 57.05

Gene sequence:

>1788_bases
TTGTTTCTGTCGTTATTGGCAGGTTGCGCAGGCACTCCAGGGACAGATGTCAGCCAGCCACAGGGACCCGTTTCTTTGGT
AAAGGCCGAGCTGTCTTCCAGCCAATATCTGGCGCTGGCCGATTCGGCCAAAGATGCCGCCTCCCGCAGCCGCTACCAGT
TACTGGCCGCCCACGCCCTGTTGAATGAATCCAATCCCCAGGGCGCGGCCCAACTGCTCGGCGCCATCAGAGGCAATCTG
GCGCAGGACACGGAAATCCAGGCCGAATTCAAATACCTCACCGCCCGGACACTGGAACAATCCGGTGATACTGCGGCGGC
GCTGAAAACCCTGGTTTATCCCAGCCATTGGAAGCTGCCGGATTGGCAGTGGGTGTCCTATCATCAGCTGCGGGCACAGC
TTTTCCGCCTTAAAAAGCAGCCCATGGACGAGGTGCGAGAACTGGCCGAGCTGGGCAAGTATCTCAATGCCACCGAAGCG
GCCGAAGTGAATGATCGCCTGTGGGGCATTCTGGCGCCCATGCATGAAGAGACCATTGAAACCTTTATGCAAGAAGCCAC
ATCGCCAATGTACAAGGGTTGGCTGCAGTTGGCCTTTATCGCCAAACACTATGCCGTTGACCCGCAAACTCTGGTACGTT
TCCTGGGTGACTGGCAGCGGGAAAACCCATTCCATCCAGCCGCTAACCGTTTACCGTCAGATTTGGACCGCGCCCTCAAC
GCCAAGCCTTATCAGGCGCGCCACATCGCCGTGCTCTTGCCCCTTTCCGGCAGCGCGGCCTCTGCCGGCTACGCCATCAA
GCAAGGCATACTGGCGGGTTATCTGGCGGCAGATGACAGCAACACCAAGGTGAGTTTTTACGACAGTGGCGCCAATGCCG
TTGCGGCTTATCAGCAGGCGCTTGCTGAAGGGGCCGAATTTATTATTGGCCCGCTGCTGCAAAGCAGCATCGAAGCCATC
GAAGCCTTGCCAAAAGCACAAGGACCCTCGGTGCCTCAGTTGTATCTCAATCAAATTGGCACTTATCAGGCCAATGTCGA
TAAGTTTTACTTTTCCCTGTCGCCGTCGGAAGAGGCCAGCGATGCAGCCGAACGCCTGTATCGTGATGGCGTAGAAAAGC
CGCTGCTACTCGCCAGCGCCGACGCCACCGGCCGCCGTATGGCCGAAGCCTTTAACCAAACCTGGCACAAACAAACCGGG
GACGTGGCCGAAGTCCACTATTTCGAGCAAGGTAATGAAATGAAGCTCACGGTTCAGCGCGCCTTGGGCGTGATGGACAG
TGAGGCCCGCATCGCCCGCATGAAAGAGATCCTTGGTCGCAGGCTTGAGGCCGAGTTCCGCTCCCGCGAAGACGTGGATG
CCATTTATATGATTGCCAGCCCGCAGGAGATACAGCTGCTCAAACCCTTTATCGATGTGAGTTTTTCGGTATTTGCCGAT
CCTGTCCCTATGTACACCTCAAGCCGCGCCAGACCCCAGGACAACGCCCGTCAGGTGCCACAGGAATTCAATAATGTCAT
GGTAAGTGACATTCCCTGGCTGATGCACCTGAGCGGTGAGTCAAGGGATATCAATGAGTTATGGCCAACCTGGAACAACG
GGCAGAAACGCCTGTTTATCATGGGCTGGGATGCACTGGATCTGGTGGGTAAACTGGCGCAAATGCGCGCCTTCCCGGGT
TTCCAGTTCCAGGGACGTGGCGGCGTACTGTCGGTGACCCACGACGGACTCATCAAGCGTCAGCTCTCCTGGGGCAAAAT
CCAGCGCGGTGTATTGAGGCCTCTGTGA

Upstream 100 bases:

>100_bases
TTAACCCCGGGCCGGAGAAGGTTAAACTGAGCTCAGCATATTACCAGAGTGAAGCCAAGTGTTGAAAAGCCGGAATCAAT
TGAAATTAGCAGGTGTTGCG

Downstream 100 bases:

>100_bases
ACCCGGGCCAGCTCGCTGAAGACAGAGCAATGAAGCACCTGTGCGCCCATGGGCTGAGGCTCGAGGCGCGCAATGTGCGT
TACCCCTTTGGCGAGATTGA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MFLSLLAGCAGTPGTDVSQPQGPVSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHALLNESNPQGAAQLLGAIRGNL
AQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLPDWQWVSYHQLRAQLFRLKKQPMDEVRELAELGKYLNATEA
AEVNDRLWGILAPMHEETIETFMQEATSPMYKGWLQLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALN
AKPYQARHIAVLLPLSGSAASAGYAIKQGILAGYLAADDSNTKVSFYDSGANAVAAYQQALAEGAEFIIGPLLQSSIEAI
EALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEASDAAERLYRDGVEKPLLLASADATGRRMAEAFNQTWHKQTG
DVAEVHYFEQGNEMKLTVQRALGVMDSEARIARMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFAD
PVPMYTSSRARPQDNARQVPQEFNNVMVSDIPWLMHLSGESRDINELWPTWNNGQKRLFIMGWDALDLVGKLAQMRAFPG
FQFQGRGGVLSVTHDGLIKRQLSWGKIQRGVLRPL

Sequences:

>Translated_595_residues
MFLSLLAGCAGTPGTDVSQPQGPVSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHALLNESNPQGAAQLLGAIRGNL
AQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLPDWQWVSYHQLRAQLFRLKKQPMDEVRELAELGKYLNATEA
AEVNDRLWGILAPMHEETIETFMQEATSPMYKGWLQLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALN
AKPYQARHIAVLLPLSGSAASAGYAIKQGILAGYLAADDSNTKVSFYDSGANAVAAYQQALAEGAEFIIGPLLQSSIEAI
EALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEASDAAERLYRDGVEKPLLLASADATGRRMAEAFNQTWHKQTG
DVAEVHYFEQGNEMKLTVQRALGVMDSEARIARMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFAD
PVPMYTSSRARPQDNARQVPQEFNNVMVSDIPWLMHLSGESRDINELWPTWNNGQKRLFIMGWDALDLVGKLAQMRAFPG
FQFQGRGGVLSVTHDGLIKRQLSWGKIQRGVLRPL
>Mature_595_residues
MFLSLLAGCAGTPGTDVSQPQGPVSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHALLNESNPQGAAQLLGAIRGNL
AQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLPDWQWVSYHQLRAQLFRLKKQPMDEVRELAELGKYLNATEA
AEVNDRLWGILAPMHEETIETFMQEATSPMYKGWLQLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALN
AKPYQARHIAVLLPLSGSAASAGYAIKQGILAGYLAADDSNTKVSFYDSGANAVAAYQQALAEGAEFIIGPLLQSSIEAI
EALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEASDAAERLYRDGVEKPLLLASADATGRRMAEAFNQTWHKQTG
DVAEVHYFEQGNEMKLTVQRALGVMDSEARIARMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFAD
PVPMYTSSRARPQDNARQVPQEFNNVMVSDIPWLMHLSGESRDINELWPTWNNGQKRLFIMGWDALDLVGKLAQMRAFPG
FQFQGRGGVLSVTHDGLIKRQLSWGKIQRGVLRPL

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=339, Percent_Identity=28.6135693215339, Blast_Score=119, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 66060; Mature: 66060

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSLLAGCAGTPGTDVSQPQGPVSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHAL
CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LNESNPQGAAQLLGAIRGNLAQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLP
HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
DWQWVSYHQLRAQLFRLKKQPMDEVRELAELGKYLNATEAAEVNDRLWGILAPMHEETIE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TFMQEATSPMYKGWLQLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALN
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCC
AKPYQARHIAVLLPLSGSAASAGYAIKQGILAGYLAADDSNTKVSFYDSGANAVAAYQQA
CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHH
LAEGAEFIIGPLLQSSIEAIEALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCEEEEEEECCCHHHH
DAAERLYRDGVEKPLLLASADATGRRMAEAFNQTWHKQTGDVAEVHYFEQGNEMKLTVQR
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHH
ALGVMDSEARIARMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFAD
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHCC
PVPMYTSSRARPQDNARQVPQEFNNVMVSDIPWLMHLSGESRDINELWPTWNNGQKRLFI
CCCCCCCCCCCCCHHHHHHHHHHCCEEHHCCCEEEEECCCCCCHHHHCCCCCCCCEEEEE
MGWDALDLVGKLAQMRAFPGFQFQGRGGVLSVTHDGLIKRQLSWGKIQRGVLRPL
ECCCHHHHHHHHHHHHCCCCCEECCCCCEEEEECCHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MFLSLLAGCAGTPGTDVSQPQGPVSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHAL
CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LNESNPQGAAQLLGAIRGNLAQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLP
HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
DWQWVSYHQLRAQLFRLKKQPMDEVRELAELGKYLNATEAAEVNDRLWGILAPMHEETIE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TFMQEATSPMYKGWLQLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALN
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCC
AKPYQARHIAVLLPLSGSAASAGYAIKQGILAGYLAADDSNTKVSFYDSGANAVAAYQQA
CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHH
LAEGAEFIIGPLLQSSIEAIEALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCEEEEEEECCCHHHH
DAAERLYRDGVEKPLLLASADATGRRMAEAFNQTWHKQTGDVAEVHYFEQGNEMKLTVQR
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHH
ALGVMDSEARIARMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFAD
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHCC
PVPMYTSSRARPQDNARQVPQEFNNVMVSDIPWLMHLSGESRDINELWPTWNNGQKRLFI
CCCCCCCCCCCCCHHHHHHHHHHCCEEHHCCCEEEEECCCCCCHHHHCCCCCCCCEEEEE
MGWDALDLVGKLAQMRAFPGFQFQGRGGVLSVTHDGLIKRQLSWGKIQRGVLRPL
ECCCHHHHHHHHHHHHCCCCCEECCCCCEEEEECCHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]