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The map label for this gene is tonB [H]

Identifier: 119776474

GI number: 119776474

Start: 3969785

End: 3970996

Strand: Direct

Name: tonB [H]

Synonym: Sama_3342

Alternate gene names: 119776474

Gene position: 3969785-3970996 (Clockwise)

Preceding gene: 119776473

Following gene: 119776475

Centisome position: 92.19

GC content: 57.51

Gene sequence:

>1212_bases
ATGATTGAGCTCGTTCTCAGGCTCACGCCGCCACTGACGCTGCTGCTGGCACTGCTTCTGTTGCTGCGCCCCTGGGTACT
TGAGCGTTTTGGTGCCCGTTTCCAATACGGTCTGTGGCTGGGTGTGCCCGTCCTGCTGCTGGCTCTGCTTGTGCCGAGCA
TCAATCCACCCAATGGCGGTGCCATGGAAACCTATAGAGTCACTCTGGGCGAGCTTTCCCACGGCGCCAGCAACACCGAT
TGGCTGAGCGCGGCTTATATTACAGGCCTCTTGATTGCAGTCGCGGCTATCGGCTTAAGCTTACTGCGCCTTACGAAGCT
CATCAGACTCGCCAAACCTGCCGCTGACACCAAGAGCACAGGCGCGCGTTTACTCACCTCCACCGAAACCGAGGGCCCCT
TTGTGTTCGGGGTCTTTCGCCCCACTGTTGTGCTGCCCGAAGGTTTTGAAGCGCGTTTCAGCAATAAAGATCAGCAGCTT
ATCCTCGCCCACGAGCTCAGCCATTGGCGCCGGGGCGACCTGCACTGCAACTTACTGGCGCTGGCGCTTGTGTGCCTGTG
CTGGTTTAACCCCCTGTGTCTGCTGGCGTATCGCCGCTTCAGACAGGATCAGGAAATGGCCTGCGACGCCGATGTCACCA
TCGAGCTGAGCCAGGCCGACCGCATTGCCTATGGCCGCGCGCTCATTGGCAATGCCGCCACGGTTGCCCGGAGTTGGCAG
CCGCTTTCACACCACTATGGAGATAAACACACCATGAAACAAAGACTCATACAGCTCAAACAAATCAAAGGTTTCAGCGC
CGCGTCACTGCTGACACCACTGGCACTGGTTGCCGCCCTCGGGATCTGGGCCCAGGCTCCGGCCATGGCTGGCGACAGTG
CCGAACTCAGCAAACCTGTTGTTCGTATTGAGCCCAAGTACCCCGTAGATGCCGCCAAACAGGGTATCGAAGGCTATGTA
CAGGCAAGGTTTGATATCGATGCCAAGGGCACTGTATCCAACGTGGTGATTTTTAAATCAGAGCCCGAAGGCCTGTTTGA
TAAGGTGTCCATCGATGCGCTGAACCAATGGCAATATGAACCCAAGGCCAACAAAGGGGTTGAGGTACAACTCGACTACA
GGCTGGCACCACCAGAGCCCATCAGTCAAAAGGCGGGTGATGGAGCGCGCGAGCGCATCGCGGTGCTGCCACACAACGAA
GCAAAACACTGA

Upstream 100 bases:

>100_bases
GCACCACTGGTGGCTGGCTTTGCGGGCAGCAACAAGCTCACCGAAGAGGATGTTGCCGAGCTGAAGCAACTTATCGATGC
CTGGGAAAAGGAGCAAAAGC

Downstream 100 bases:

>100_bases
TATCTCCGCCCTAAGTAACCCCCTCTGACGTTCCGGCAATTGGCCAAACTGCCGGTTAGGCAAACGCGATGCAACGCCAC
AAGCGGGCCGGCCCTTGTGG

Product: antirepressor regulating drug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MIELVLRLTPPLTLLLALLLLLRPWVLERFGARFQYGLWLGVPVLLLALLVPSINPPNGGAMETYRVTLGELSHGASNTD
WLSAAYITGLLIAVAAIGLSLLRLTKLIRLAKPAADTKSTGARLLTSTETEGPFVFGVFRPTVVLPEGFEARFSNKDQQL
ILAHELSHWRRGDLHCNLLALALVCLCWFNPLCLLAYRRFRQDQEMACDADVTIELSQADRIAYGRALIGNAATVARSWQ
PLSHHYGDKHTMKQRLIQLKQIKGFSAASLLTPLALVAALGIWAQAPAMAGDSAELSKPVVRIEPKYPVDAAKQGIEGYV
QARFDIDAKGTVSNVVIFKSEPEGLFDKVSIDALNQWQYEPKANKGVEVQLDYRLAPPEPISQKAGDGARERIAVLPHNE
AKH

Sequences:

>Translated_403_residues
MIELVLRLTPPLTLLLALLLLLRPWVLERFGARFQYGLWLGVPVLLLALLVPSINPPNGGAMETYRVTLGELSHGASNTD
WLSAAYITGLLIAVAAIGLSLLRLTKLIRLAKPAADTKSTGARLLTSTETEGPFVFGVFRPTVVLPEGFEARFSNKDQQL
ILAHELSHWRRGDLHCNLLALALVCLCWFNPLCLLAYRRFRQDQEMACDADVTIELSQADRIAYGRALIGNAATVARSWQ
PLSHHYGDKHTMKQRLIQLKQIKGFSAASLLTPLALVAALGIWAQAPAMAGDSAELSKPVVRIEPKYPVDAAKQGIEGYV
QARFDIDAKGTVSNVVIFKSEPEGLFDKVSIDALNQWQYEPKANKGVEVQLDYRLAPPEPISQKAGDGARERIAVLPHNE
AKH
>Mature_403_residues
MIELVLRLTPPLTLLLALLLLLRPWVLERFGARFQYGLWLGVPVLLLALLVPSINPPNGGAMETYRVTLGELSHGASNTD
WLSAAYITGLLIAVAAIGLSLLRLTKLIRLAKPAADTKSTGARLLTSTETEGPFVFGVFRPTVVLPEGFEARFSNKDQQL
ILAHELSHWRRGDLHCNLLALALVCLCWFNPLCLLAYRRFRQDQEMACDADVTIELSQADRIAYGRALIGNAATVARSWQ
PLSHHYGDKHTMKQRLIQLKQIKGFSAASLLTPLALVAALGIWAQAPAMAGDSAELSKPVVRIEPKYPVDAAKQGIEGYV
QARFDIDAKGTVSNVVIFKSEPEGLFDKVSIDALNQWQYEPKANKGVEVQLDYRLAPPEPISQKAGDGARERIAVLPHNE
AKH

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates such as cobalamin, and various iron compounds (such as iron dicitrate, enterochelin, aerobac

COG id: COG4219

COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 44317; Mature: 44317

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELVLRLTPPLTLLLALLLLLRPWVLERFGARFQYGLWLGVPVLLLALLVPSINPPNGG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCC
AMETYRVTLGELSHGASNTDWLSAAYITGLLIAVAAIGLSLLRLTKLIRLAKPAADTKST
CCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GARLLTSTETEGPFVFGVFRPTVVLPEGFEARFSNKDQQLILAHELSHWRRGDLHCNLLA
CCEEEECCCCCCCEEEEECCCEEECCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCHHHHH
LALVCLCWFNPLCLLAYRRFRQDQEMACDADVTIELSQADRIAYGRALIGNAATVARSWQ
HHHHHHHHHCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHCCC
PLSHHYGDKHTMKQRLIQLKQIKGFSAASLLTPLALVAALGIWAQAPAMAGDSAELSKPV
HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCE
VRIEPKYPVDAAKQGIEGYVQARFDIDAKGTVSNVVIFKSEPEGLFDKVSIDALNQWQYE
EEECCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCC
PKANKGVEVQLDYRLAPPEPISQKAGDGARERIAVLPHNEAKH
CCCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEECCCCCCCC
>Mature Secondary Structure
MIELVLRLTPPLTLLLALLLLLRPWVLERFGARFQYGLWLGVPVLLLALLVPSINPPNGG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCC
AMETYRVTLGELSHGASNTDWLSAAYITGLLIAVAAIGLSLLRLTKLIRLAKPAADTKST
CCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GARLLTSTETEGPFVFGVFRPTVVLPEGFEARFSNKDQQLILAHELSHWRRGDLHCNLLA
CCEEEECCCCCCCEEEEECCCEEECCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCHHHHH
LALVCLCWFNPLCLLAYRRFRQDQEMACDADVTIELSQADRIAYGRALIGNAATVARSWQ
HHHHHHHHHCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHCCC
PLSHHYGDKHTMKQRLIQLKQIKGFSAASLLTPLALVAALGIWAQAPAMAGDSAELSKPV
HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCE
VRIEPKYPVDAAKQGIEGYVQARFDIDAKGTVSNVVIFKSEPEGLFDKVSIDALNQWQYE
EEECCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCC
PKANKGVEVQLDYRLAPPEPISQKAGDGARERIAVLPHNEAKH
CCCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1838128 [H]