| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is blaI [H]
Identifier: 119776473
GI number: 119776473
Start: 3969397
End: 3969792
Strand: Direct
Name: blaI [H]
Synonym: Sama_3341
Alternate gene names: 119776473
Gene position: 3969397-3969792 (Clockwise)
Preceding gene: 119776471
Following gene: 119776474
Centisome position: 92.18
GC content: 54.04
Gene sequence:
>396_bases ATGACCCAACCCGAATTAAAGGACATCAGCCCCACCGAACTGGAAGTGCTTAAGGTGCTGTGGCAGCAAGCCCCCCTCAG CGCCAATGACATAGTCGAGGCACTTAACCGCGAGGGAGAGTGGCATGAGAAAACGGTCAAAACCCTGATAAACCGCTTGG TGAACAAGGGGGCATTGGGGTTTGAAAAGGATGGCCGGGCGTATCTGTACTTCCCAAAGCTCGCCGAACATTCCTATCAA CGCAAGGAGAGCCAGAGCTTTATCGAGCGGGTGTTTGGCGGCAAGTTGGCACCACTGGTGGCTGGCTTTGCGGGCAGCAA CAAGCTCACCGAAGAGGATGTTGCCGAGCTGAAGCAACTTATCGATGCCTGGGAAAAGGAGCAAAAGCATGATTGA
Upstream 100 bases:
>100_bases GCCTGGCAAAACACAGGCGCATAAAAATTATGCTTGCCATAGCGATTACATCTGTAATATTAATAGTATTACACGTGTAA TTGATTAAACAGGCAGCGCC
Downstream 100 bases:
>100_bases GCTCGTTCTCAGGCTCACGCCGCCACTGACGCTGCTGCTGGCACTGCTTCTGTTGCTGCGCCCCTGGGTACTTGAGCGTT TTGGTGCCCGTTTCCAATAC
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: Beta-lactamase repressor protein; Regulatory protein BlaI [H]
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTQPELKDISPTELEVLKVLWQQAPLSANDIVEALNREGEWHEKTVKTLINRLVNKGALGFEKDGRAYLYFPKLAEHSYQ RKESQSFIERVFGGKLAPLVAGFAGSNKLTEEDVAELKQLIDAWEKEQKHD
Sequences:
>Translated_131_residues MTQPELKDISPTELEVLKVLWQQAPLSANDIVEALNREGEWHEKTVKTLINRLVNKGALGFEKDGRAYLYFPKLAEHSYQ RKESQSFIERVFGGKLAPLVAGFAGSNKLTEEDVAELKQLIDAWEKEQKHD >Mature_130_residues TQPELKDISPTELEVLKVLWQQAPLSANDIVEALNREGEWHEKTVKTLINRLVNKGALGFEKDGRAYLYFPKLAEHSYQR KESQSFIERVFGGKLAPLVAGFAGSNKLTEEDVAELKQLIDAWEKEQKHD
Specific function: Transcriptional repressor that constitutively blocks expression of beta-lactamase. Regulates genes involved in antibiotic resistance. Binds DNA as a dimer [H]
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BlaI transcriptional regulatory family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005650 - InterPro: IPR011991 [H]
Pfam domain/function: PF03965 Pencillinase_R [H]
EC number: NA
Molecular weight: Translated: 14937; Mature: 14806
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPELKDISPTELEVLKVLWQQAPLSANDIVEALNREGEWHEKTVKTLINRLVNKGALG CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC FEKDGRAYLYFPKLAEHSYQRKESQSFIERVFGGKLAPLVAGFAGSNKLTEEDVAELKQL CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH IDAWEKEQKHD HHHHHHHHCCC >Mature Secondary Structure TQPELKDISPTELEVLKVLWQQAPLSANDIVEALNREGEWHEKTVKTLINRLVNKGALG CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC FEKDGRAYLYFPKLAEHSYQRKESQSFIERVFGGKLAPLVAGFAGSNKLTEEDVAELKQL CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH IDAWEKEQKHD HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3096969; 3305074; 3260234; 3040663; 3498148 [H]