| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yihG [H]
Identifier: 119776423
GI number: 119776423
Start: 3910837
End: 3911778
Strand: Direct
Name: yihG [H]
Synonym: Sama_3291
Alternate gene names: 119776423
Gene position: 3910837-3911778 (Clockwise)
Preceding gene: 119776422
Following gene: 119776425
Centisome position: 90.82
GC content: 53.72
Gene sequence:
>942_bases ATGCTTAACTTTTTGCCGGGGCCGCTGCTGTTTTTCATAAGCGGTAGCTTGCTCATTATCAACACCGCCATCTGTGGTTC CCTGGTGTGCATCGGTGGTCTGTTCAAACTGCTGACGCCCTTCAAGGCGGGCCGTGTCCGGGTCACCATGCTGATGAACC GTTTTATGTGGCTTTGGGCCACTCTCAACGGCGCCATCCTCAAGCTGATTGCCAAAATCGAATGGGACGTCAAAGGTCTG GAACAGCTGGATAAAAACGGCTGGTATCTGGTGATAAGCAACCACTTGAGCGGCTTCGACATTGCGGCGCAGACCTATAT CCTTCGGAACCACATTCCCATGCTCAAGTTCTTTCTCAAAAAAGAACTGATTTATGTGCCCATCATGGGGCTGGGCTGCT GGGCGCTGGACATGCCTTTTATGAACCGTACCAGCCCCGAGAAGCTGAAAAAGAATCCCAAGCTCAAGGGCAAGGATCTG GAAACGACCCGCAAGGCGTGCGAAAAATTCCGCGATCTGCCCACTTCCATCATCAACTATGTGGAAGGCAGCCGCTTTAC CGAAGAAAAGCGCGACCGGCAAAACTCGCCCTATCGCTACCTGCTGCGCCCCAAAGCAGGCGGTATCGCGTTCGCACTTT CTGCCATGGGTGAGCAGTTCAGCCACCTCTTGAACGTCACCGTGGTTTACCCGGATGCCCCAAAAGACATTCTAGCCGGC GTAATGCAGGGCAAGGTGAGTAAAATTGTTATCAGAATAGAAGCACTGCCGGTGCCCGAAGTGGATGACAAACAGTACTT CAGCAGCGCCGAATACCGGGCCCAATTCCAGCGTTGGCTCAATGACATCTGGCTGCAAAAGGATGAACAAATCCACGAGC TACTGGCCGAGCACAAAGCCAGCACCAGCAGCTACCGTGAACTGGCCGAGCGTGGCCACTGA
Upstream 100 bases:
>100_bases GACTTCCAGGAACAGCTCAACCAGATCTGGGCCCGCAAAGACGGCATCCTGAAACAGCTTTCCGGTGAGAAAGAGATAAA AACTGAGGTTTCTGAACAAC
Downstream 100 bases:
>100_bases GTCACTTTGCGCTCAGTGCGAAAATAGCTACTCCAAGACGCGATTCAGGACGGCAGTTGAAATGCTGTCCTTTTTATCTT TTAAAGCCCTGTAAACCGCG
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLNFLPGPLLFFISGSLLIINTAICGSLVCIGGLFKLLTPFKAGRVRVTMLMNRFMWLWATLNGAILKLIAKIEWDVKGL EQLDKNGWYLVISNHLSGFDIAAQTYILRNHIPMLKFFLKKELIYVPIMGLGCWALDMPFMNRTSPEKLKKNPKLKGKDL ETTRKACEKFRDLPTSIINYVEGSRFTEEKRDRQNSPYRYLLRPKAGGIAFALSAMGEQFSHLLNVTVVYPDAPKDILAG VMQGKVSKIVIRIEALPVPEVDDKQYFSSAEYRAQFQRWLNDIWLQKDEQIHELLAEHKASTSSYRELAERGH
Sequences:
>Translated_313_residues MLNFLPGPLLFFISGSLLIINTAICGSLVCIGGLFKLLTPFKAGRVRVTMLMNRFMWLWATLNGAILKLIAKIEWDVKGL EQLDKNGWYLVISNHLSGFDIAAQTYILRNHIPMLKFFLKKELIYVPIMGLGCWALDMPFMNRTSPEKLKKNPKLKGKDL ETTRKACEKFRDLPTSIINYVEGSRFTEEKRDRQNSPYRYLLRPKAGGIAFALSAMGEQFSHLLNVTVVYPDAPKDILAG VMQGKVSKIVIRIEALPVPEVDDKQYFSSAEYRAQFQRWLNDIWLQKDEQIHELLAEHKASTSSYRELAERGH >Mature_313_residues MLNFLPGPLLFFISGSLLIINTAICGSLVCIGGLFKLLTPFKAGRVRVTMLMNRFMWLWATLNGAILKLIAKIEWDVKGL EQLDKNGWYLVISNHLSGFDIAAQTYILRNHIPMLKFFLKKELIYVPIMGLGCWALDMPFMNRTSPEKLKKNPKLKGKDL ETTRKACEKFRDLPTSIINYVEGSRFTEEKRDRQNSPYRYLLRPKAGGIAFALSAMGEQFSHLLNVTVVYPDAPKDILAG VMQGKVSKIVIRIEALPVPEVDDKQYFSSAEYRAQFQRWLNDIWLQKDEQIHELLAEHKASTSSYRELAERGH
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790293, Length=295, Percent_Identity=40.6779661016949, Blast_Score=256, Evalue=9e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 35814; Mature: 35814
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFLPGPLLFFISGSLLIINTAICGSLVCIGGLFKLLTPFKAGRVRVTMLMNRFMWLWA CCCCCCCHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TLNGAILKLIAKIEWDVKGLEQLDKNGWYLVISNHLSGFDIAAQTYILRNHIPMLKFFLK HHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH KELIYVPIMGLGCWALDMPFMNRTSPEKLKKNPKLKGKDLETTRKACEKFRDLPTSIINY HHHHEEECCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH VEGSRFTEEKRDRQNSPYRYLLRPKAGGIAFALSAMGEQFSHLLNVTVVYPDAPKDILAG HCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHH VMQGKVSKIVIRIEALPVPEVDDKQYFSSAEYRAQFQRWLNDIWLQKDEQIHELLAEHKA HHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC STSSYRELAERGH CHHHHHHHHHCCC >Mature Secondary Structure MLNFLPGPLLFFISGSLLIINTAICGSLVCIGGLFKLLTPFKAGRVRVTMLMNRFMWLWA CCCCCCCHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TLNGAILKLIAKIEWDVKGLEQLDKNGWYLVISNHLSGFDIAAQTYILRNHIPMLKFFLK HHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH KELIYVPIMGLGCWALDMPFMNRTSPEKLKKNPKLKGKDLETTRKACEKFRDLPTSIINY HHHHEEECCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH VEGSRFTEEKRDRQNSPYRYLLRPKAGGIAFALSAMGEQFSHLLNVTVVYPDAPKDILAG HCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHH VMQGKVSKIVIRIEALPVPEVDDKQYFSSAEYRAQFQRWLNDIWLQKDEQIHELLAEHKA HHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC STSSYRELAERGH CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]