| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yihG [H]
Identifier: 119776422
GI number: 119776422
Start: 3909924
End: 3910844
Strand: Direct
Name: yihG [H]
Synonym: Sama_3290
Alternate gene names: 119776422
Gene position: 3909924-3910844 (Clockwise)
Preceding gene: 119776420
Following gene: 119776423
Centisome position: 90.8
GC content: 52.44
Gene sequence:
>921_bases ATGCGCGCGCTGTTGTCGCTTATCCGAGGCTCATTGGCTTTTCTGGGTTACACACTTAACACCCTGTTTTGGTTTGTGCC TATCCTGCTGCTTGGTCTGGTAAAGCTGCTGCCCATTCCTGCCCTGCGCAAACTGATGTCACATCTGGTGGATGGTTGCG CCTCCAACTGGATTTCAGTGAACGGGTTTATCCAAAATGTGCTGCACCCAGTGCGCATTGAGGTACTCGGTGACGCTGAA CTGACCCGTGACGAGTGGTATATGGTAATCGCCAACCACCAGAGCTGGGTCGATATTCTGGTGCTGCAACGTATTTTTAA CCGCAAGATCCCCTTCCTGAAGTTCTTCCTCAAGCAACAGCTGCTCTATGTGCCTGTGCTGGGTCTCGCCTGGTGGGCAC TGGATTTTCCTTTTATGCGCCGCTATTCCACCGCCGAGCTGAAAAAGAATCCCAAGCTGAAGGGCAAAGACATTGAAATA ACCCGCCGCGCCTGTGCCAAATTCAAAGACAAACCGGTGAGTGTAATGAATTTTGTGGAAGGTACCCGTTTTCAGGCCGC CAAACACAAGAAGCAAAACTCGCCCTTCCAACATTTGCTGCGCCCCAAAGCTGGCGGTATGGCGTTTGCGCTCTCGGCCA TGGGCGAGCAAATCCACAAGTTGGTGGACGTGGCCATTTACTACCCCGGAAAGGTCCCCAGCTTCTGGGACTTTATTTCC GGCCAGGTGGATGAAATCCGCGTGCACGTGACGGTGGCTGACATTGCCAGCGAGATGCGCGGTGACTACATCAACGACCG AGAGTTTAAGCAGGACTTCCAGGAACAGCTCAACCAGATCTGGGCCCGCAAAGACGGCATCCTGAAACAGCTTTCCGGTG AGAAAGAGATAAAAACTGAGGTTTCTGAACAACATGCTTAA
Upstream 100 bases:
>100_bases CCTCGTTACTGGTAGTGCCAGCCGTATTGGCGTGGCAGTACGATTGAGCAATAGGGCATTCACGGTTAACATAGGCCTCC ACAAATTTCTGGAGGTATGA
Downstream 100 bases:
>100_bases CTTTTTGCCGGGGCCGCTGCTGTTTTTCATAAGCGGTAGCTTGCTCATTATCAACACCGCCATCTGTGGTTCCCTGGTGT GCATCGGTGGTCTGTTCAAA
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRALLSLIRGSLAFLGYTLNTLFWFVPILLLGLVKLLPIPALRKLMSHLVDGCASNWISVNGFIQNVLHPVRIEVLGDAE LTRDEWYMVIANHQSWVDILVLQRIFNRKIPFLKFFLKQQLLYVPVLGLAWWALDFPFMRRYSTAELKKNPKLKGKDIEI TRRACAKFKDKPVSVMNFVEGTRFQAAKHKKQNSPFQHLLRPKAGGMAFALSAMGEQIHKLVDVAIYYPGKVPSFWDFIS GQVDEIRVHVTVADIASEMRGDYINDREFKQDFQEQLNQIWARKDGILKQLSGEKEIKTEVSEQHA
Sequences:
>Translated_306_residues MRALLSLIRGSLAFLGYTLNTLFWFVPILLLGLVKLLPIPALRKLMSHLVDGCASNWISVNGFIQNVLHPVRIEVLGDAE LTRDEWYMVIANHQSWVDILVLQRIFNRKIPFLKFFLKQQLLYVPVLGLAWWALDFPFMRRYSTAELKKNPKLKGKDIEI TRRACAKFKDKPVSVMNFVEGTRFQAAKHKKQNSPFQHLLRPKAGGMAFALSAMGEQIHKLVDVAIYYPGKVPSFWDFIS GQVDEIRVHVTVADIASEMRGDYINDREFKQDFQEQLNQIWARKDGILKQLSGEKEIKTEVSEQHA >Mature_306_residues MRALLSLIRGSLAFLGYTLNTLFWFVPILLLGLVKLLPIPALRKLMSHLVDGCASNWISVNGFIQNVLHPVRIEVLGDAE LTRDEWYMVIANHQSWVDILVLQRIFNRKIPFLKFFLKQQLLYVPVLGLAWWALDFPFMRRYSTAELKKNPKLKGKDIEI TRRACAKFKDKPVSVMNFVEGTRFQAAKHKKQNSPFQHLLRPKAGGMAFALSAMGEQIHKLVDVAIYYPGKVPSFWDFIS GQVDEIRVHVTVADIASEMRGDYINDREFKQDFQEQLNQIWARKDGILKQLSGEKEIKTEVSEQHA
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790293, Length=298, Percent_Identity=43.6241610738255, Blast_Score=258, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 35254; Mature: 35254
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLSLIRGSLAFLGYTLNTLFWFVPILLLGLVKLLPIPALRKLMSHLVDGCASNWISV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEH NGFIQNVLHPVRIEVLGDAELTRDEWYMVIANHQSWVDILVLQRIFNRKIPFLKFFLKQQ HHHHHHCCCHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH LLYVPVLGLAWWALDFPFMRRYSTAELKKNPKLKGKDIEITRRACAKFKDKPVSVMNFVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH GTRFQAAKHKKQNSPFQHLLRPKAGGMAFALSAMGEQIHKLVDVAIYYPGKVPSFWDFIS CCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC GQVDEIRVHVTVADIASEMRGDYINDREFKQDFQEQLNQIWARKDGILKQLSGEKEIKTE CCEEHEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VSEQHA HHHCCC >Mature Secondary Structure MRALLSLIRGSLAFLGYTLNTLFWFVPILLLGLVKLLPIPALRKLMSHLVDGCASNWISV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEH NGFIQNVLHPVRIEVLGDAELTRDEWYMVIANHQSWVDILVLQRIFNRKIPFLKFFLKQQ HHHHHHCCCHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH LLYVPVLGLAWWALDFPFMRRYSTAELKKNPKLKGKDIEITRRACAKFKDKPVSVMNFVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH GTRFQAAKHKKQNSPFQHLLRPKAGGMAFALSAMGEQIHKLVDVAIYYPGKVPSFWDFIS CCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC GQVDEIRVHVTVADIASEMRGDYINDREFKQDFQEQLNQIWARKDGILKQLSGEKEIKTE CCEEHEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VSEQHA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]