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The map label for this gene is comM [H]

Identifier: 119776420

GI number: 119776420

Start: 3907091

End: 3908617

Strand: Direct

Name: comM [H]

Synonym: Sama_3288

Alternate gene names: 119776420

Gene position: 3907091-3908617 (Clockwise)

Preceding gene: 119776417

Following gene: 119776422

Centisome position: 90.73

GC content: 60.18

Gene sequence:

>1527_bases
ATGGCCATTGCCTGTGTCGCCACCCGAGCAAGCCTGGGGGTTGAAGCCCCGGCGGTTACCGTTGAAGTGCATCTGGCCAA
TGGCCTGCCCGCCTTTAATCTGGTTGGCCTGCCCGAGGCCTCTGTCAAAGAGGCCAGAGAACGGGTACGCAGCGCCCTGG
TGAACGCCGGGTTCGAGTTCCCCATGCGCCGTATCACAGTGAATCTCGCCCCTGCCGATCTGCCCAAGCAGGGAGGCCGT
TACGATCTTCCCATCGCCATCGGCATTCTCGCCGCCTCCGGTCAAATCCCCCTCACCAGCCTGAAAGACCGCGAATTCGT
TGGCGAGCTGGCCCTGTCCGGTGATATTCGCCATTGCCCGGGCCTGTTGCCCGTTATTGTGGCGGCTCGCCGCGATGGAC
GCGAACTCATATTACCGCTGGCGAACCGCGCCGATGCTGAACTGGTGGATTATCCCGCCATTCGCCTGTGCAGCCAGTTG
GTGCATCTGGTGGCCTTCCTTCACGGCCAGCAGTCCCTGCCGGGGCTGGAGCAAGGCGCAGAATGGCTCGATGATACACA
GGCCAATGTGCTATGCCTGAGTGACGTTGTAGGTCAGTATCAAGCCAAGCAGGCATTGGAAATCGCCGCAGCAGGCTCGC
ACAATCTCTTGATGCTCGGTTTGCCCGGCTGCGGTAAAACCATGCTCGCAAGCCGCATCATGGGGCTGCTCCCACCACTT
GGCTATGATGAAGCCCTCGAAGTTGCTGCACTGCACTCAGTGGCAGGTCTCAATATCAAACCCGGTGAGTTCCATCGCCG
CCCTTTCAGGTCGCCACACCACACCTGCTCAGCCATTTCCCTGGTTGGGGGTGGCAGTGTGCCCAAGCCCGGCGAAATCT
CACTCGCCCACCGGGGCGTGTTATTTCTCGATGAGCTGGCAGAATTCCCCCGCAAGGTGCTCGACTGTTTGCGCGAACCC
ATGGAAACCGGCGAAGTGGTGATTTCCCGGGCTGCCGCAAAGCTTACTTTCGCCAGCCGATTTCAATTAATTGCCGCCAT
GAATCCCAGCCCCTGCGGCAGCATGGGACCAGGCAGCCGCTCAAGCCCTGATCAGATAAACCGCTACCTCGGCAGGCTAT
CCGGCCCTTTTCTTGACCGCTTCGATTTGTCCATCGAGGTGCCCCCTCTGCCACCGGGCACCCTGACTCAGGAAGGCAAT
AATGGTGAAACCAGCCAAAGCGTCGCCCAGCGTGTTCACCGCGCCAGGGAAAGGCAGCTTGCCCGGGCGGGAGTGCTGAA
TGCCGAACTCTCGGGCAAGGCACTGAAAAACGCTGGGTTTAGCAGCGCAGATCTCAGCTTTCTTGAACAGAGTGTCAATC
GCCTCGGGCTGTCGGTGCGCAGCTTTCATCGCCTGCAGCGGGTCGCCCGCACTATCGCAGATTTGGAAAACAGCCACATG
GTAGAGAGGCGCCATATCGCACAGGCGCTGGGTTACAGGGCCATGGACAGGCTACTTGCCAATCTTGGGCAGCAACTTGG
GCGCTGA

Upstream 100 bases:

>100_bases
ATCGGTGCCCCTGGCTCTTGATAAGATAAAACACCATGGGATTACATTTTCCCGACACCTGCTAAGCTTAGGTCATCTTT
GGAACAAAAGGACTTGTCCC

Downstream 100 bases:

>100_bases
CTCTATCACATTCCATAAAGCAACAAAGGACTGATTTTTGAGGAATCATTCTTTTTGGATTCTGGGTAAAGAGCCATAAG
TATCTCGGATGCAGTACCGC

Product: magnesium chelatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MAIACVATRASLGVEAPAVTVEVHLANGLPAFNLVGLPEASVKEARERVRSALVNAGFEFPMRRITVNLAPADLPKQGGR
YDLPIAIGILAASGQIPLTSLKDREFVGELALSGDIRHCPGLLPVIVAARRDGRELILPLANRADAELVDYPAIRLCSQL
VHLVAFLHGQQSLPGLEQGAEWLDDTQANVLCLSDVVGQYQAKQALEIAAAGSHNLLMLGLPGCGKTMLASRIMGLLPPL
GYDEALEVAALHSVAGLNIKPGEFHRRPFRSPHHTCSAISLVGGGSVPKPGEISLAHRGVLFLDELAEFPRKVLDCLREP
METGEVVISRAAAKLTFASRFQLIAAMNPSPCGSMGPGSRSSPDQINRYLGRLSGPFLDRFDLSIEVPPLPPGTLTQEGN
NGETSQSVAQRVHRARERQLARAGVLNAELSGKALKNAGFSSADLSFLEQSVNRLGLSVRSFHRLQRVARTIADLENSHM
VERRHIAQALGYRAMDRLLANLGQQLGR

Sequences:

>Translated_508_residues
MAIACVATRASLGVEAPAVTVEVHLANGLPAFNLVGLPEASVKEARERVRSALVNAGFEFPMRRITVNLAPADLPKQGGR
YDLPIAIGILAASGQIPLTSLKDREFVGELALSGDIRHCPGLLPVIVAARRDGRELILPLANRADAELVDYPAIRLCSQL
VHLVAFLHGQQSLPGLEQGAEWLDDTQANVLCLSDVVGQYQAKQALEIAAAGSHNLLMLGLPGCGKTMLASRIMGLLPPL
GYDEALEVAALHSVAGLNIKPGEFHRRPFRSPHHTCSAISLVGGGSVPKPGEISLAHRGVLFLDELAEFPRKVLDCLREP
METGEVVISRAAAKLTFASRFQLIAAMNPSPCGSMGPGSRSSPDQINRYLGRLSGPFLDRFDLSIEVPPLPPGTLTQEGN
NGETSQSVAQRVHRARERQLARAGVLNAELSGKALKNAGFSSADLSFLEQSVNRLGLSVRSFHRLQRVARTIADLENSHM
VERRHIAQALGYRAMDRLLANLGQQLGR
>Mature_507_residues
AIACVATRASLGVEAPAVTVEVHLANGLPAFNLVGLPEASVKEARERVRSALVNAGFEFPMRRITVNLAPADLPKQGGRY
DLPIAIGILAASGQIPLTSLKDREFVGELALSGDIRHCPGLLPVIVAARRDGRELILPLANRADAELVDYPAIRLCSQLV
HLVAFLHGQQSLPGLEQGAEWLDDTQANVLCLSDVVGQYQAKQALEIAAAGSHNLLMLGLPGCGKTMLASRIMGLLPPLG
YDEALEVAALHSVAGLNIKPGEFHRRPFRSPHHTCSAISLVGGGSVPKPGEISLAHRGVLFLDELAEFPRKVLDCLREPM
ETGEVVISRAAAKLTFASRFQLIAAMNPSPCGSMGPGSRSSPDQINRYLGRLSGPFLDRFDLSIEVPPLPPGTLTQEGNN
GETSQSVAQRVHRARERQLARAGVLNAELSGKALKNAGFSSADLSFLEQSVNRLGLSVRSFHRLQRVARTIADLENSHMV
ERRHIAQALGYRAMDRLLANLGQQLGR

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=508, Percent_Identity=51.7716535433071, Blast_Score=508, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 54526; Mature: 54394

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIACVATRASLGVEAPAVTVEVHLANGLPAFNLVGLPEASVKEARERVRSALVNAGFEF
CEEEEEEHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PMRRITVNLAPADLPKQGGRYDLPIAIGILAASGQIPLTSLKDREFVGELALSGDIRHCP
CCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCC
GLLPVIVAARRDGRELILPLANRADAELVDYPAIRLCSQLVHLVAFLHGQQSLPGLEQGA
CHHHHHHHHCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EWLDDTQANVLCLSDVVGQYQAKQALEIAAAGSHNLLMLGLPGCGKTMLASRIMGLLPPL
HHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCC
GYDEALEVAALHSVAGLNIKPGEFHRRPFRSPHHTCSAISLVGGGSVPKPGEISLAHRGV
CCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHEEEECCCCCCCCCCEEHHHCCH
LFLDELAEFPRKVLDCLREPMETGEVVISRAAAKLTFASRFQLIAAMNPSPCGSMGPGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
SSPDQINRYLGRLSGPFLDRFDLSIEVPPLPPGTLTQEGNNGETSQSVAQRVHRARERQL
CCHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ARAGVLNAELSGKALKNAGFSSADLSFLEQSVNRLGLSVRSFHRLQRVARTIADLENSHM
HHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERRHIAQALGYRAMDRLLANLGQQLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIACVATRASLGVEAPAVTVEVHLANGLPAFNLVGLPEASVKEARERVRSALVNAGFEF
EEEEEEHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PMRRITVNLAPADLPKQGGRYDLPIAIGILAASGQIPLTSLKDREFVGELALSGDIRHCP
CCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCC
GLLPVIVAARRDGRELILPLANRADAELVDYPAIRLCSQLVHLVAFLHGQQSLPGLEQGA
CHHHHHHHHCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EWLDDTQANVLCLSDVVGQYQAKQALEIAAAGSHNLLMLGLPGCGKTMLASRIMGLLPPL
HHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCC
GYDEALEVAALHSVAGLNIKPGEFHRRPFRSPHHTCSAISLVGGGSVPKPGEISLAHRGV
CCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHEEEECCCCCCCCCCEEHHHCCH
LFLDELAEFPRKVLDCLREPMETGEVVISRAAAKLTFASRFQLIAAMNPSPCGSMGPGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
SSPDQINRYLGRLSGPFLDRFDLSIEVPPLPPGTLTQEGNNGETSQSVAQRVHRARERQL
CCHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ARAGVLNAELSGKALKNAGFSSADLSFLEQSVNRLGLSVRSFHRLQRVARTIADLENSHM
HHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERRHIAQALGYRAMDRLLANLGQQLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]