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The map label for this gene is pgpB [H]

Identifier: 119776407

GI number: 119776407

Start: 3890275

End: 3891057

Strand: Direct

Name: pgpB [H]

Synonym: Sama_3275

Alternate gene names: 119776407

Gene position: 3890275-3891057 (Clockwise)

Preceding gene: 119776406

Following gene: 119776415

Centisome position: 90.34

GC content: 58.24

Gene sequence:

>783_bases
ATGCAGCATACCCAGGCCCCCCGTTTTGACCGCAGCATTCGCCCCCTGCTCCTGCTCACCCTGTGGCTGTTACTGCTGGT
ACCTGCCACTGTCCTGACCCTGGCGCAGCTCCCCCTCTTCCCCTGGATGCCATTGGACGGAGCCACTGCTGAGATTGTCT
ATGCCATCACCTTTACCGGCACAGCGCCCTGGGGCGCCATCAGCGCGGCGGCCGTCATACTGCTGGCCTTTATTCGTCTG
TCACACCCCCAAGCCATCAAGTTACTGTTGGCGCTGGCGCTCTCACTCGGCAGCAGCCTCTGGCTCAACGAAAGCCTGAA
GACCCACTTTAATGAACCCAGGCCCAATGTATTGTTCCTGGCCGAACACAAGCTGCTGGATACAGATGACTTTTACCGTC
TTCACAAGGGCGATCGCCGCGATGTGATGACAGTGCTTTTTGCCAGTAACGCGTCGGATTTACCGCCCATGAGCCCCCGC
GTTGCAAACCACTGGCAGCAAGAGGTGGGGTTGTCGTTTCCGTCGGGGCACACCCTGTTCGCCACCATTCTGGCGCTAAC
TGCGAGCTGGTTTTTTATCGCTTCAGGACACTGGATAACCTGCTCATTTTTAGGCATCTGGGCGCTGGCAATGGGCGGAT
CTCGCATGCTGCTGGGCATGCACCATAGCCAGGATGTGATGGCAGCCACGGCGTTGTCACTGCCGCTGTGCCTATTGGGC
ATATTGTTGGCAAGCTGGCTGGGACCGAAGCTATTCAGGACTCGCCAGCCCCAATCAGATTAG

Upstream 100 bases:

>100_bases
GGCCAAATACTTTGTGGTTGCCGTTTTTTTATTTTGAATTTCCGGGAGTTGATGGTTAGTCTGCCTGGATTGTTTTAATT
GTTGCCAGAAAGGAGTCTTG

Downstream 100 bases:

>100_bases
TGGAGGAACTGCTTCACCAACGCATCGTAGCGGCCGTTTTCACGAATTTTACGCAGACCTTCGTTGAAGGCATCACGCAC
TATGGAATTGCGGAACATCA

Product: phosphatidylglycerophosphatase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQHTQAPRFDRSIRPLLLLTLWLLLLVPATVLTLAQLPLFPWMPLDGATAEIVYAITFTGTAPWGAISAAAVILLAFIRL
SHPQAIKLLLALALSLGSSLWLNESLKTHFNEPRPNVLFLAEHKLLDTDDFYRLHKGDRRDVMTVLFASNASDLPPMSPR
VANHWQQEVGLSFPSGHTLFATILALTASWFFIASGHWITCSFLGIWALAMGGSRMLLGMHHSQDVMAATALSLPLCLLG
ILLASWLGPKLFRTRQPQSD

Sequences:

>Translated_260_residues
MQHTQAPRFDRSIRPLLLLTLWLLLLVPATVLTLAQLPLFPWMPLDGATAEIVYAITFTGTAPWGAISAAAVILLAFIRL
SHPQAIKLLLALALSLGSSLWLNESLKTHFNEPRPNVLFLAEHKLLDTDDFYRLHKGDRRDVMTVLFASNASDLPPMSPR
VANHWQQEVGLSFPSGHTLFATILALTASWFFIASGHWITCSFLGIWALAMGGSRMLLGMHHSQDVMAATALSLPLCLLG
ILLASWLGPKLFRTRQPQSD
>Mature_260_residues
MQHTQAPRFDRSIRPLLLLTLWLLLLVPATVLTLAQLPLFPWMPLDGATAEIVYAITFTGTAPWGAISAAAVILLAFIRL
SHPQAIKLLLALALSLGSSLWLNESLKTHFNEPRPNVLFLAEHKLLDTDDFYRLHKGDRRDVMTVLFASNASDLPPMSPR
VANHWQQEVGLSFPSGHTLFATILALTASWFFIASGHWITCSFLGIWALAMGGSRMLLGMHHSQDVMAATALSLPLCLLG
ILLASWLGPKLFRTRQPQSD

Specific function: Hydrolyzes phosphatidylglycerophosphate, phosphatidic acid, and lysophosphatidic acid; the pattern of activities varies according to subcellular location [H]

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Cell outer membrane; Multi-pass membrane protein (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787534, Length=200, Percent_Identity=31.5, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 28722; Mature: 28722

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTQAPRFDRSIRPLLLLTLWLLLLVPATVLTLAQLPLFPWMPLDGATAEIVYAITFTG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEC
TAPWGAISAAAVILLAFIRLSHPQAIKLLLALALSLGSSLWLNESLKTHFNEPRPNVLFL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCCCCEEEE
AEHKLLDTDDFYRLHKGDRRDVMTVLFASNASDLPPMSPRVANHWQQEVGLSFPSGHTLF
ECCCCCCCHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH
ATILALTASWFFIASGHWITCSFLGIWALAMGGSRMLLGMHHSQDVMAATALSLPLCLLG
HHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
ILLASWLGPKLFRTRQPQSD
HHHHHHHCHHHHHCCCCCCC
>Mature Secondary Structure
MQHTQAPRFDRSIRPLLLLTLWLLLLVPATVLTLAQLPLFPWMPLDGATAEIVYAITFTG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEC
TAPWGAISAAAVILLAFIRLSHPQAIKLLLALALSLGSSLWLNESLKTHFNEPRPNVLFL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCCCCEEEE
AEHKLLDTDDFYRLHKGDRRDVMTVLFASNASDLPPMSPRVANHWQQEVGLSFPSGHTLF
ECCCCCCCHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHH
ATILALTASWFFIASGHWITCSFLGIWALAMGGSRMLLGMHHSQDVMAATALSLPLCLLG
HHHHHHHHHHHHEECCCEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
ILLASWLGPKLFRTRQPQSD
HHHHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]