The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776395

Identifier: 119776395

GI number: 119776395

Start: 3871566

End: 3872273

Strand: Direct

Name: 119776395

Synonym: Sama_3263

Alternate gene names: NA

Gene position: 3871566-3872273 (Clockwise)

Preceding gene: 119776394

Following gene: 119776396

Centisome position: 89.91

GC content: 50.71

Gene sequence:

>708_bases
ATGAAAGGCGGACAAACGTTTACCCAAACAATGCTTAAGGTCTGCCAACACAGCCTGTTGGCAACGGCCATATTGGGAAC
TTGTCTGTTTGCCCAGTCCAGTACACAGCTGGACAGGAGCAAAATCGTTTCCACTCTGGAGAGCAAATATGGCCCCAGGG
CCGGGAAGCGCGCCAATGCTTGGTTTCAAGTGGTTGACTCGGCCCAAGGGCTGAGCGAAATGGAAAAGCTGACGAAGGTG
AACACTTTTTTTAATCTGTTCACCTTCGTCGACGACATTAAATTGTGGGGCGATTCCAACTATTGGGCAACACCCATGGA
GTTTATCGGGGTTGCCGGTGGCGATTGTGAGGACTTTTCCATCGCCAAGTATTTTACCCTGCTGCAACTCGGTATACCGG
ACGAGAAGCTCAGGATCACCATGGTAAAGGCAACCTCAGTCAATCAATACCACATGGTGCTGGCCTACTACGAAACACCG
GGGTCCGTACCACTGGTACTCGATAATCTGGATAAGCAAATCAAGCCGGCAACAGCCAGGCGAGATCTGCTGCCTGTTTA
TAGTTTTAACGGTAAACAACTGTGGTTAAACAAAGAAAAGGGACGGGGTGTGCTCGCGGGCTCTTCCTCGCGGCTGGAAA
AATGGACCGATTTGACCCACAGACTAGGGGTTGAACGGCTCAGGCAACCCAAGATGAGATTGGAGTAA

Upstream 100 bases:

>100_bases
CGGGTAATCGCGGAGATTGTTGGAGACGACACTACTGCCGACATGAAGTGGAACATATATACTGTCGACCAGGAAGTGAA
ATAACATTTGAATCAATAGC

Downstream 100 bases:

>100_bases
CTAACGATATGACACTGTTTCGACAGCTGTATTCGCTATTGTTTGGTCTGTTTTTATTGGTAATCACCGCCTTGGCTTAT
GTGCAATTCACAGAAACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKGGQTFTQTMLKVCQHSLLATAILGTCLFAQSSTQLDRSKIVSTLESKYGPRAGKRANAWFQVVDSAQGLSEMEKLTKV
NTFFNLFTFVDDIKLWGDSNYWATPMEFIGVAGGDCEDFSIAKYFTLLQLGIPDEKLRITMVKATSVNQYHMVLAYYETP
GSVPLVLDNLDKQIKPATARRDLLPVYSFNGKQLWLNKEKGRGVLAGSSSRLEKWTDLTHRLGVERLRQPKMRLE

Sequences:

>Translated_235_residues
MKGGQTFTQTMLKVCQHSLLATAILGTCLFAQSSTQLDRSKIVSTLESKYGPRAGKRANAWFQVVDSAQGLSEMEKLTKV
NTFFNLFTFVDDIKLWGDSNYWATPMEFIGVAGGDCEDFSIAKYFTLLQLGIPDEKLRITMVKATSVNQYHMVLAYYETP
GSVPLVLDNLDKQIKPATARRDLLPVYSFNGKQLWLNKEKGRGVLAGSSSRLEKWTDLTHRLGVERLRQPKMRLE
>Mature_235_residues
MKGGQTFTQTMLKVCQHSLLATAILGTCLFAQSSTQLDRSKIVSTLESKYGPRAGKRANAWFQVVDSAQGLSEMEKLTKV
NTFFNLFTFVDDIKLWGDSNYWATPMEFIGVAGGDCEDFSIAKYFTLLQLGIPDEKLRITMVKATSVNQYHMVLAYYETP
GSVPLVLDNLDKQIKPATARRDLLPVYSFNGKQLWLNKEKGRGVLAGSSSRLEKWTDLTHRLGVERLRQPKMRLE

Specific function: Unknown

COG id: COG3672

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26483; Mature: 26483

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGQTFTQTMLKVCQHSLLATAILGTCLFAQSSTQLDRSKIVSTLESKYGPRAGKRANA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
WFQVVDSAQGLSEMEKLTKVNTFFNLFTFVDDIKLWGDSNYWATPMEFIGVAGGDCEDFS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCCCCCCH
IAKYFTLLQLGIPDEKLRITMVKATSVNQYHMVLAYYETPGSVPLVLDNLDKQIKPATAR
HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCHHCCCCHHH
RDLLPVYSFNGKQLWLNKEKGRGVLAGSSSRLEKWTDLTHRLGVERLRQPKMRLE
HCCCEEEECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKGGQTFTQTMLKVCQHSLLATAILGTCLFAQSSTQLDRSKIVSTLESKYGPRAGKRANA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
WFQVVDSAQGLSEMEKLTKVNTFFNLFTFVDDIKLWGDSNYWATPMEFIGVAGGDCEDFS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCCCCCCH
IAKYFTLLQLGIPDEKLRITMVKATSVNQYHMVLAYYETPGSVPLVLDNLDKQIKPATAR
HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCHHCCCCHHH
RDLLPVYSFNGKQLWLNKEKGRGVLAGSSSRLEKWTDLTHRLGVERLRQPKMRLE
HCCCEEEECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA