The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776367

Identifier: 119776367

GI number: 119776367

Start: 3829138

End: 3829524

Strand: Direct

Name: 119776367

Synonym: Sama_3235

Alternate gene names: NA

Gene position: 3829138-3829524 (Clockwise)

Preceding gene: 119776366

Following gene: 119776368

Centisome position: 88.92

GC content: 51.94

Gene sequence:

>387_bases
ATGAAAGCTCGCATATTATTTATACCCGCATTACTGCTGGGATTAACCGCCACAGCAGGCGCCACCGAATACCGCTTTAT
CGCCGTCGACAACAGCCCCGAAACTCAGATGTGTGTCGCAGCAGGCAGCAATAAGGTGACCAAGCTGCGGATGCAGTTCA
ACGAAGCCAGCGGCAGTCCCCGCTACCATGCCAACAGCATTCGCTGCAACGACAGGAGCATTGCCCAGTTCGCTCATGCC
TATGGTGCTGACAAGGCCTATGACTATTTGGCCTCTCACTCTCGGGATAAAAACCGGGTGATAGAAAGCGTGACAATTAA
AGATCTGTCAGCTGCCGCAAGCCAAAACAGTGACGAGATTGTTTATATCCGGGTGTCTTCACGCTAA

Upstream 100 bases:

>100_bases
TGCCGTGGAGCATGCCTTTATAGATGAGCCCCACAGGTAAGTCCTACAGCGCCCACCACAGGGTCAGGAACTTGATAGGT
CATCATTGAAGGAACAAACT

Downstream 100 bases:

>100_bases
GCCGGTTGTAACAATCGACAAGGTCTCCACCGGGTGAACCCCTTGTACGGCCGCGATCTGGCCGACAGGGCCCCGGCGAA
CCTGATGGGTTATCCGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKARILFIPALLLGLTATAGATEYRFIAVDNSPETQMCVAAGSNKVTKLRMQFNEASGSPRYHANSIRCNDRSIAQFAHA
YGADKAYDYLASHSRDKNRVIESVTIKDLSAAASQNSDEIVYIRVSSR

Sequences:

>Translated_128_residues
MKARILFIPALLLGLTATAGATEYRFIAVDNSPETQMCVAAGSNKVTKLRMQFNEASGSPRYHANSIRCNDRSIAQFAHA
YGADKAYDYLASHSRDKNRVIESVTIKDLSAAASQNSDEIVYIRVSSR
>Mature_128_residues
MKARILFIPALLLGLTATAGATEYRFIAVDNSPETQMCVAAGSNKVTKLRMQFNEASGSPRYHANSIRCNDRSIAQFAHA
YGADKAYDYLASHSRDKNRVIESVTIKDLSAAASQNSDEIVYIRVSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14061; Mature: 14061

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARILFIPALLLGLTATAGATEYRFIAVDNSPETQMCVAAGSNKVTKLRMQFNEASGSP
CCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCC
RYHANSIRCNDRSIAQFAHAYGADKAYDYLASHSRDKNRVIESVTIKDLSAAASQNSDEI
CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCE
VYIRVSSR
EEEEECCC
>Mature Secondary Structure
MKARILFIPALLLGLTATAGATEYRFIAVDNSPETQMCVAAGSNKVTKLRMQFNEASGSP
CCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCC
RYHANSIRCNDRSIAQFAHAYGADKAYDYLASHSRDKNRVIESVTIKDLSAAASQNSDEI
CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCE
VYIRVSSR
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA