Click here to switch to the map view.

The map label for this gene is 119776070

Identifier: 119776070

GI number: 119776070

Start: 3491171

End: 3493387

Strand: Reverse

Name: 119776070

Synonym: Sama_2938

Alternate gene names: NA

Gene position: 3493387-3491171 (Counterclockwise)

Preceding gene: 119776071

Following gene: 119776063

Centisome position: 81.13

GC content: 53.72

Gene sequence:

>2217_bases
ATGGGTAATTGGGCACGGCAATGCGCTCGACATCATCACAATAAACAATGGAATAACACAATGAAAAAATGGTTACTGAC
TGCCGCCATCGCGGCCGCCTTCGGTGCCCAGGCAGATGAAGGTATGTGGCAGCCACATCAGCTTCCTGCACTGGCCAAGA
CGTTGAAAGCCAAGGGACTGGAAATCGACCCTGAGTCTATCTCCAAACTGACCGAATTCCCGATGAATGCCGTTATCAGC
CTGGGCGGCTGTACCGCATCATTCGTTTCTCCCAAGGGCTTGGTGGTCACCAACCATCACTGTGCCTATGGCTCTATCCA
GTACAACTCCACCGCCGAAAAGAATCTGCTGGCGGATGGCTTCCTGGCCAAGAGCTTCGATGAAGAGCTGCCAGCCGCTC
CGGGTTCACGCGTATACGTGACCGAGTCTGTGACCAATGTGACTGCGCAAATCAACGAAGGTCTTGAGTCCCTCAAGGGC
GATGACTTTTACAAGGGCGTAGAAGCCAAAGAAAAAGCGCTGGTTGCCGAGTGTGAAAAAGAAGATGGCTACCGCTGTAA
CGTATACAGCTTCCACGGCGGCCTGGAGTATTATCTCATCAAGCAGATGGAAATCCGCGACGTGCGTCTGGTGCATAACC
CAGCGGGCAGCGTGGGTAAATACGGCGGTGACATCGACAACTGGATGTGGCCACGTCATACCGGCGACTACTCTTTCTAC
CGCGCTTATGTGGGCAAAGATGGCAAGCCAGCCGACTTCTCTAAGGACAACGTGCCTTACGAGCCAAAAAGCTTCCTGAA
AGTCTCTGCCAAGGGTCTGAAGGATGGCGATTTTGTGATGGTTACCGGTTATCCCGGCCGCACCAACCGCTACCGCACCG
CCTCTGAAGTAGAAAACCAGTTCACCTGGAACTACCCCGCCAGCCGCGAGCTGCGTGAGCAGATCATTGATATTATCAAA
ACCAGCGCGCCAGAAGGCAGCGATGCCCGTATCAAGTACGAAAGCACCCTGGCGAGCCTCGCCAACTACGCCAAAAACTT
CGCCTCCATGATCGAGTTTTACGGCAAATCCACCATGTTGGAAGACCGTAAGGCCCGCGAAGCTGAACTGGCCAACTGGA
TTAAGGCCGATGCCCAGCGTCAGGCCAAGTACGGTCAGACCCTGGCCGATCTTGAGCGCTTGGTTGCCGAAGGCAACAAG
ACCCAGGAATTGGATCTGATCCTCGGCTACATGAGTTACTCCACGCCAATGAGCACTGCCGCGCGTCTGTATCGCCTGGC
CCATGAAAAGCAGCTGCCAGACATGGAGCGCGAGCCTGGCTTCCAGGACCGCGATATGACCCGTTTTACCGCTGGTCTTG
AGCGTATCGACCGTCGTTACGACGCCAGTGTAGACAAGGTAGTACTGTTTGAAATGCTCAAACATTACGCCGCCCTGCCT
GCCGACAAGCGCCGCGCCGATCTCGATGCCTTCTTCGGTATTGGCAAAAAGTTTGACGAGAAGAAGCTTAAGAAGCAGCT
CGACAAGATGTACGACAAAACCGAAATCGGTAACAAAGATGTGCGTATGGCCTGGATGGACAAGTCTGTTGCTGACTTCA
AAGCCAGCAAAGATCCATTCATTCAGTTGGCTGTTGCCACCTATGACATCTCCATGGCCCGTGAAAAGGCTCAGAAGGAA
CTGGCCGGTGAGCTGATGAAGGTGCGTCCTGCTTACATGGAAGCCATCATTGCCTACAACAACGAGCTGGGTAAGCCGGT
TTACGCCGATGCCAACTCCAGCCTGCGTGTGACCTACGGTAACGTGAAGGGCTACTCACCAAAAGATGGTCTCTATGCCG
TGCCATTCACCCGTCTTGAAGGTATCACCCAGAAAGACACAGGTGTTGACCCATTCGATGCACCCAAGAAGCAGCTGGAG
CTGATTGAAGCCAAGCAGTACGGCGATTTCTATGTGAAAGACATCGACTCCGTGCCGGTTAACTTCCTGTCTACCGTAGA
CACCACTGGCGGCAACTCTGGTTCACCAACCCTGAACGGCCGCGCCGAACTGGTTGGTCTGCTGTTTGATGGTGTATACG
AGAGCATCATCGGCGACTGGAACTACGACGACAACATCAACCGCTCCATCCACGTCGACAGCCGTTATATGCTGTGGGTG
ATGAAGTATCTCGACAAGGCAGACAACCTGCTGGCTGAGATGGAAATCGTTGAATAA

Upstream 100 bases:

>100_bases
TTGTAACCCTGTGGTAAAGTCGGGTCTTCGCGCCCGGCTTTTTTGTACCCGCCGTTTGGGTTGTTTGATGTGTTAAATCA
AACATCAATGACTCGATTAA

Downstream 100 bases:

>100_bases
CAGTCTGTTTGCTGACTGAATAAAAGCGGGGCCGATAGGCCCCGTTTTTATTCGCTATTATCGACTTGGATGGATGTTCA
AATGGTCTTGACCGGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 738; Mature: 737

Protein sequence:

>738_residues
MGNWARQCARHHHNKQWNNTMKKWLLTAAIAAAFGAQADEGMWQPHQLPALAKTLKAKGLEIDPESISKLTEFPMNAVIS
LGGCTASFVSPKGLVVTNHHCAYGSIQYNSTAEKNLLADGFLAKSFDEELPAAPGSRVYVTESVTNVTAQINEGLESLKG
DDFYKGVEAKEKALVAECEKEDGYRCNVYSFHGGLEYYLIKQMEIRDVRLVHNPAGSVGKYGGDIDNWMWPRHTGDYSFY
RAYVGKDGKPADFSKDNVPYEPKSFLKVSAKGLKDGDFVMVTGYPGRTNRYRTASEVENQFTWNYPASRELREQIIDIIK
TSAPEGSDARIKYESTLASLANYAKNFASMIEFYGKSTMLEDRKAREAELANWIKADAQRQAKYGQTLADLERLVAEGNK
TQELDLILGYMSYSTPMSTAARLYRLAHEKQLPDMEREPGFQDRDMTRFTAGLERIDRRYDASVDKVVLFEMLKHYAALP
ADKRRADLDAFFGIGKKFDEKKLKKQLDKMYDKTEIGNKDVRMAWMDKSVADFKASKDPFIQLAVATYDISMAREKAQKE
LAGELMKVRPAYMEAIIAYNNELGKPVYADANSSLRVTYGNVKGYSPKDGLYAVPFTRLEGITQKDTGVDPFDAPKKQLE
LIEAKQYGDFYVKDIDSVPVNFLSTVDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWNYDDNINRSIHVDSRYMLWV
MKYLDKADNLLAEMEIVE

Sequences:

>Translated_738_residues
MGNWARQCARHHHNKQWNNTMKKWLLTAAIAAAFGAQADEGMWQPHQLPALAKTLKAKGLEIDPESISKLTEFPMNAVIS
LGGCTASFVSPKGLVVTNHHCAYGSIQYNSTAEKNLLADGFLAKSFDEELPAAPGSRVYVTESVTNVTAQINEGLESLKG
DDFYKGVEAKEKALVAECEKEDGYRCNVYSFHGGLEYYLIKQMEIRDVRLVHNPAGSVGKYGGDIDNWMWPRHTGDYSFY
RAYVGKDGKPADFSKDNVPYEPKSFLKVSAKGLKDGDFVMVTGYPGRTNRYRTASEVENQFTWNYPASRELREQIIDIIK
TSAPEGSDARIKYESTLASLANYAKNFASMIEFYGKSTMLEDRKAREAELANWIKADAQRQAKYGQTLADLERLVAEGNK
TQELDLILGYMSYSTPMSTAARLYRLAHEKQLPDMEREPGFQDRDMTRFTAGLERIDRRYDASVDKVVLFEMLKHYAALP
ADKRRADLDAFFGIGKKFDEKKLKKQLDKMYDKTEIGNKDVRMAWMDKSVADFKASKDPFIQLAVATYDISMAREKAQKE
LAGELMKVRPAYMEAIIAYNNELGKPVYADANSSLRVTYGNVKGYSPKDGLYAVPFTRLEGITQKDTGVDPFDAPKKQLE
LIEAKQYGDFYVKDIDSVPVNFLSTVDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWNYDDNINRSIHVDSRYMLWV
MKYLDKADNLLAEMEIVE
>Mature_737_residues
GNWARQCARHHHNKQWNNTMKKWLLTAAIAAAFGAQADEGMWQPHQLPALAKTLKAKGLEIDPESISKLTEFPMNAVISL
GGCTASFVSPKGLVVTNHHCAYGSIQYNSTAEKNLLADGFLAKSFDEELPAAPGSRVYVTESVTNVTAQINEGLESLKGD
DFYKGVEAKEKALVAECEKEDGYRCNVYSFHGGLEYYLIKQMEIRDVRLVHNPAGSVGKYGGDIDNWMWPRHTGDYSFYR
AYVGKDGKPADFSKDNVPYEPKSFLKVSAKGLKDGDFVMVTGYPGRTNRYRTASEVENQFTWNYPASRELREQIIDIIKT
SAPEGSDARIKYESTLASLANYAKNFASMIEFYGKSTMLEDRKAREAELANWIKADAQRQAKYGQTLADLERLVAEGNKT
QELDLILGYMSYSTPMSTAARLYRLAHEKQLPDMEREPGFQDRDMTRFTAGLERIDRRYDASVDKVVLFEMLKHYAALPA
DKRRADLDAFFGIGKKFDEKKLKKQLDKMYDKTEIGNKDVRMAWMDKSVADFKASKDPFIQLAVATYDISMAREKAQKEL
AGELMKVRPAYMEAIIAYNNELGKPVYADANSSLRVTYGNVKGYSPKDGLYAVPFTRLEGITQKDTGVDPFDAPKKQLEL
IEAKQYGDFYVKDIDSVPVNFLSTVDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWNYDDNINRSIHVDSRYMLWVM
KYLDKADNLLAEMEIVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83068; Mature: 82937

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNWARQCARHHHNKQWNNTMKKWLLTAAIAAAFGAQADEGMWQPHQLPALAKTLKAKGL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
EIDPESISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHHCAYGSIQYNSTAEKNLLADG
CCCHHHHHHHHHCCHHHHEECCCCEECCCCCCCEEEECCCCEECEEEECCCHHHHHHHHH
FLAKSFDEELPAAPGSRVYVTESVTNVTAQINEGLESLKGDDFYKGVEAKEKALVAECEK
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHC
EDGYRCNVYSFHGGLEYYLIKQMEIRDVRLVHNPAGSVGKYGGDIDNWMWPRHTGDYSFY
CCCCEEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
RAYVGKDGKPADFSKDNVPYEPKSFLKVSAKGLKDGDFVMVTGYPGRTNRYRTASEVENQ
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHC
FTWNYPASRELREQIIDIIKTSAPEGSDARIKYESTLASLANYAKNFASMIEFYGKSTML
EECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EDRKAREAELANWIKADAQRQAKYGQTLADLERLVAEGNKTQELDLILGYMSYSTPMSTA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH
ARLYRLAHEKQLPDMEREPGFQDRDMTRFTAGLERIDRRYDASVDKVVLFEMLKHYAALP
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
ADKRRADLDAFFGIGKKFDEKKLKKQLDKMYDKTEIGNKDVRMAWMDKSVADFKASKDPF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCE
IQLAVATYDISMAREKAQKELAGELMKVRPAYMEAIIAYNNELGKPVYADANSSLRVTYG
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEC
NVKGYSPKDGLYAVPFTRLEGITQKDTGVDPFDAPKKQLELIEAKQYGDFYVKDIDSVPV
CCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCH
NFLSTVDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWNYDDNINRSIHVDSRYMLWV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHH
MKYLDKADNLLAEMEIVE
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNWARQCARHHHNKQWNNTMKKWLLTAAIAAAFGAQADEGMWQPHQLPALAKTLKAKGL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
EIDPESISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHHCAYGSIQYNSTAEKNLLADG
CCCHHHHHHHHHCCHHHHEECCCCEECCCCCCCEEEECCCCEECEEEECCCHHHHHHHHH
FLAKSFDEELPAAPGSRVYVTESVTNVTAQINEGLESLKGDDFYKGVEAKEKALVAECEK
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHC
EDGYRCNVYSFHGGLEYYLIKQMEIRDVRLVHNPAGSVGKYGGDIDNWMWPRHTGDYSFY
CCCCEEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
RAYVGKDGKPADFSKDNVPYEPKSFLKVSAKGLKDGDFVMVTGYPGRTNRYRTASEVENQ
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHC
FTWNYPASRELREQIIDIIKTSAPEGSDARIKYESTLASLANYAKNFASMIEFYGKSTML
EECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EDRKAREAELANWIKADAQRQAKYGQTLADLERLVAEGNKTQELDLILGYMSYSTPMSTA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH
ARLYRLAHEKQLPDMEREPGFQDRDMTRFTAGLERIDRRYDASVDKVVLFEMLKHYAALP
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
ADKRRADLDAFFGIGKKFDEKKLKKQLDKMYDKTEIGNKDVRMAWMDKSVADFKASKDPF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCE
IQLAVATYDISMAREKAQKELAGELMKVRPAYMEAIIAYNNELGKPVYADANSSLRVTYG
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEC
NVKGYSPKDGLYAVPFTRLEGITQKDTGVDPFDAPKKQLELIEAKQYGDFYVKDIDSVPV
CCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCH
NFLSTVDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWNYDDNINRSIHVDSRYMLWV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHH
MKYLDKADNLLAEMEIVE
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA