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The map label for this gene is 119776006

Identifier: 119776006

GI number: 119776006

Start: 3411841

End: 3412686

Strand: Reverse

Name: 119776006

Synonym: Sama_2874

Alternate gene names: NA

Gene position: 3412686-3411841 (Counterclockwise)

Preceding gene: 119776007

Following gene: 119776005

Centisome position: 79.25

GC content: 55.08

Gene sequence:

>846_bases
ATGGTACAAGAAAAACGTGGATTTTCCCTCAGTGGCTATCTGGTGTTTGTGGTGCTGATTGCCCTGCATCTGGTGTTTTT
TGCCATGATGGCCACCACCTCTCAATATGGTGGCGTGATAGGTAATGTATTGACCGCCCTATGCTGGCCCGGCTTTTTTA
TGGTGCAGCCCAATCAGGCCAAGGTGCTGACATTGTTCGGCAGTTACGTGGGCTCGGTGAGAAACACGGGGCTGCGCTGG
ACCATCCCCCTCTTTGCCAAGCGCACCATCTCGCTGCGTATCCGTAACTTCGAGAGTGCCAAAATCAAGGTGAACGATAA
CCTCGGTAACCCCATCGAAATCGCCACCATAGTAGTGTGGTCGGTTACCGACAGTGCCGAGGCCGTGTTCGAGGTGGATG
ATTACGAAAGCTATGTGTCCATTCAAAGTGAAGCGGCGCTTCGCAACATGGCCAGCAGTTATGCATACGATCCCCAGGAT
GAGAACGAAGTGGCACTCAGAAGCCATCCCCAGGCCATCGCCGATAAGCTCAAGCAGGAAATTCAGGAGCGTCTTGGCCG
TGCCGGCGTCACCGTACTGGAAGCCCGTATCAGCCACCTGGCGTATGCCCAGGAAATTGCCAGTGCCATGTTGCAGCGTC
AGCAGGCCACCGCCATCATCGCCGCCCGGGCCAAAATTGTCGAAGGTGCAGTGGGCATGGTGGAAATGGCTCTGGAGCGG
CTAAAAGCCCAGAACGTGGTGGAGCTGGATGAAGAGCGCAAGGCGGTGATGGTGAGTAACCTGTTGGTGGTGCTGTGTGG
TGATAAGAGTACTCAGCCTGTTGTGAACACGGGTTCCCTGTACTGA

Upstream 100 bases:

>100_bases
TGTCCCGCGCCTATCTGACACAAGATTTACAAAATACCTGTTGATCTTTTTTTAACCAGATCTTAGGTTGATATCAAATT
GATATCAATTGGAGTGAGTC

Downstream 100 bases:

>100_bases
GGCGCTTATGACCAAAAAGGCTTACCCATTAAGGATCAATGCCGATGTCCTCGCGGCCATGCAGCGCTGGGCCGATGATG
AGCTGAGAAGCCTGAATGCG

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVQEKRGFSLSGYLVFVVLIALHLVFFAMMATTSQYGGVIGNVLTALCWPGFFMVQPNQAKVLTLFGSYVGSVRNTGLRW
TIPLFAKRTISLRIRNFESAKIKVNDNLGNPIEIATIVVWSVTDSAEAVFEVDDYESYVSIQSEAALRNMASSYAYDPQD
ENEVALRSHPQAIADKLKQEIQERLGRAGVTVLEARISHLAYAQEIASAMLQRQQATAIIAARAKIVEGAVGMVEMALER
LKAQNVVELDEERKAVMVSNLLVVLCGDKSTQPVVNTGSLY

Sequences:

>Translated_281_residues
MVQEKRGFSLSGYLVFVVLIALHLVFFAMMATTSQYGGVIGNVLTALCWPGFFMVQPNQAKVLTLFGSYVGSVRNTGLRW
TIPLFAKRTISLRIRNFESAKIKVNDNLGNPIEIATIVVWSVTDSAEAVFEVDDYESYVSIQSEAALRNMASSYAYDPQD
ENEVALRSHPQAIADKLKQEIQERLGRAGVTVLEARISHLAYAQEIASAMLQRQQATAIIAARAKIVEGAVGMVEMALER
LKAQNVVELDEERKAVMVSNLLVVLCGDKSTQPVVNTGSLY
>Mature_281_residues
MVQEKRGFSLSGYLVFVVLIALHLVFFAMMATTSQYGGVIGNVLTALCWPGFFMVQPNQAKVLTLFGSYVGSVRNTGLRW
TIPLFAKRTISLRIRNFESAKIKVNDNLGNPIEIATIVVWSVTDSAEAVFEVDDYESYVSIQSEAALRNMASSYAYDPQD
ENEVALRSHPQAIADKLKQEIQERLGRAGVTVLEARISHLAYAQEIASAMLQRQQATAIIAARAKIVEGAVGMVEMALER
LKAQNVVELDEERKAVMVSNLLVVLCGDKSTQPVVNTGSLY

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30923; Mature: 30923

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQEKRGFSLSGYLVFVVLIALHLVFFAMMATTSQYGGVIGNVLTALCWPGFFMVQPNQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCC
KVLTLFGSYVGSVRNTGLRWTIPLFAKRTISLRIRNFESAKIKVNDNLGNPIEIATIVVW
HHHHHHHHHHHHHHCCCCEEEEHHHHCEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEE
SVTDSAEAVFEVDDYESYVSIQSEAALRNMASSYAYDPQDENEVALRSHPQAIADKLKQE
EECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHH
IQERLGRAGVTVLEARISHLAYAQEIASAMLQRQQATAIIAARAKIVEGAVGMVEMALER
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAQNVVELDEERKAVMVSNLLVVLCGDKSTQPVVNTGSLY
HHHCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVQEKRGFSLSGYLVFVVLIALHLVFFAMMATTSQYGGVIGNVLTALCWPGFFMVQPNQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCC
KVLTLFGSYVGSVRNTGLRWTIPLFAKRTISLRIRNFESAKIKVNDNLGNPIEIATIVVW
HHHHHHHHHHHHHHCCCCEEEEHHHHCEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEE
SVTDSAEAVFEVDDYESYVSIQSEAALRNMASSYAYDPQDENEVALRSHPQAIADKLKQE
EECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHH
IQERLGRAGVTVLEARISHLAYAQEIASAMLQRQQATAIIAARAKIVEGAVGMVEMALER
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAQNVVELDEERKAVMVSNLLVVLCGDKSTQPVVNTGSLY
HHHCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA