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The map label for this gene is recJ [H]

Identifier: 119775869

GI number: 119775869

Start: 3270060

End: 3271784

Strand: Reverse

Name: recJ [H]

Synonym: Sama_2737

Alternate gene names: 119775869

Gene position: 3271784-3270060 (Counterclockwise)

Preceding gene: 119775870

Following gene: 119775867

Centisome position: 75.98

GC content: 57.04

Gene sequence:

>1725_bases
GTGAAGTACAAGCTCACCAGGCGCGAAACGGTGGATGACTCCCACCTGCCAAATCACCTGCATCCTTTGATAAAGCAGCT
GCTTGCCCGCCGTGGGGTAGCTGGCGATGACTGCGAGCAGGAGCTGTCGCGCCTGCTGCGACCCGAGACTATGCTGGGTC
TCGATAGGGCCGCGTGCCTGTTGGCCGACGCTGCGATGGCCTCAAAGCGTATGCTGATTGTCGGTGACTTTGATGCCGAC
GGTGCCACTTCCACCAGTGTGTGTTTGCTGGCACTCAAGATGCTCGGTATTCACGGCGCTGATTTTCTTATTCCCAACCG
CTTCGATTATGGTTATGGCCTCAGTGTGCCCCTGGTGGCCCTCGCGGTGGAAAAGGGCGCCGAGGTGCTTATCACGGTCG
ACAATGGTATCAGCAGCATCGAAGGTGTTGCGGCGGCCAAAGCCGCCGGGATGCAGGTGGTGATCACCGACCACCATCTG
CCCGGGCAGGTATTGCCGGACGCCGACGCCATAGTTAACCCCAATCAACAGGGGTGCACCTTTGCCAGCAAATCCATTGC
CGGTGTGGGTGTGGCCTTTTATCTGATGCTGGCCCTTCGCGCCGAACTCAGACGCCGTGGCTGGTTTGAAAAGCTTGGTA
TAAAGGAGCCCAATCTGGCGGTACTGGTGGACATAGTAGCGCTGGGGACTGTGGCCGACGTGGTCAGTTTGGATGCCAAT
AACCGGATTCTGGTGGATGCCGGGCTTAAACGTGTCAGAGCTGGCCGTTGCAGACCCGGGATCACTGCGCTTTTGGAAGT
CGCGAAGCGTAATCCCGCCCGCGCAGTGGCTGCTGACTTTGGCTTTGCCGTTGGGCCCAGACTCAATGCTGCCGGGCGCC
TCGATGAAATGTCTCTGGGCGTCGAAACCCTTTTGTGCGACGACATCATGTATGCCCGCAGAATGGCGGCCGAGCTGGAT
GGGCTTAATCAGGAGCGCCGCGAGCTGGAAACCGGTATGCAGGCCGAGGCATTAAAGAGCCTCGAGCGCTTGCAACTGGA
AGAATCGCAACTGCCCTGGGGCATAGCCCTGTATCAGGATGACTGGCATCAGGGGGTGATAGGCATTCTGGCGTCCCGTA
TCAAAGACAAATACCACAGACCCGTTATTGCCTTTGCTGAAGCGTCGGATAACGAGGTAAAGGGCTCGGCCCGCTCCATC
AAGGGTCTGCATATGCGAGACTTGCTGGAGTTGATTTCCAGCCGTCATCCCGGGCTTATTCCCAAGTTTGGCGGCCATGC
CATGGCAGCAGGTTTGAGTCTCGCCAAAGCGGATGTCAGCAAGTTTCAGACAGTGTTTGATGACACTGTTCGGGAGCTTC
TTTCCCCTGAACTGCTGACAGGTGAAATCCTCTCCGATGGCGAGTTGCCCATCGAATACCTGACGCTGGAAACCGCGAAC
CTTATCCGTGCCAGCGGGCCCTGGGGACAGGGCTTTGAAGAGCCATTGTTTGATGGCCATTTCAGGTTGTTACAGCAGCG
TCTTGTGGGTGAGAAGCACTTAAAAATGATGGTGGAAACAGAGTGTGGCCGGCTGATGCTGGATGCCATTGCCTTCAACG
TGGACCTTAAACTCTGGCCCGATGCCACGGTGCGCCATGTGCACCTTGCTTATCGCCTTGATGTGAACGAGTTTCGTGGC
AACCAAAGCCTGCAGCTCTTGGTCGAGCAAATCGACGCCAAATGA

Upstream 100 bases:

>100_bases
GGTTAAGCAGTAACAGCGTGCTGCCTCCCAGAAAAGGTGAGCCCAGGCTCACCTTTTTGTTGTATTGGTATTCCCCAAGG
TTCAAGCAAGGAGTCATTGC

Downstream 100 bases:

>100_bases
GTCCGGACACCCGTTAACCACGAGCCTGTTAACAAAAAAGCCACCCTTGGGTGGCTTTTTGTTTTTAACGGTTAGCTTAT
CAGGCGGTAACCGTTTTTAC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MKYKLTRRETVDDSHLPNHLHPLIKQLLARRGVAGDDCEQELSRLLRPETMLGLDRAACLLADAAMASKRMLIVGDFDAD
GATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVDNGISSIEGVAAAKAAGMQVVITDHHL
PGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFYLMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDAN
NRILVDAGLKRVRAGRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARRMAAELD
GLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQDDWHQGVIGILASRIKDKYHRPVIAFAEASDNEVKGSARSI
KGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSLAKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETAN
LIRASGPWGQGFEEPLFDGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWPDATVRHVHLAYRLDVNEFRG
NQSLQLLVEQIDAK

Sequences:

>Translated_574_residues
MKYKLTRRETVDDSHLPNHLHPLIKQLLARRGVAGDDCEQELSRLLRPETMLGLDRAACLLADAAMASKRMLIVGDFDAD
GATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVDNGISSIEGVAAAKAAGMQVVITDHHL
PGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFYLMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDAN
NRILVDAGLKRVRAGRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARRMAAELD
GLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQDDWHQGVIGILASRIKDKYHRPVIAFAEASDNEVKGSARSI
KGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSLAKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETAN
LIRASGPWGQGFEEPLFDGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWPDATVRHVHLAYRLDVNEFRG
NQSLQLLVEQIDAK
>Mature_574_residues
MKYKLTRRETVDDSHLPNHLHPLIKQLLARRGVAGDDCEQELSRLLRPETMLGLDRAACLLADAAMASKRMLIVGDFDAD
GATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVDNGISSIEGVAAAKAAGMQVVITDHHL
PGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFYLMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDAN
NRILVDAGLKRVRAGRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARRMAAELD
GLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQDDWHQGVIGILASRIKDKYHRPVIAFAEASDNEVKGSARSI
KGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSLAKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETAN
LIRASGPWGQGFEEPLFDGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWPDATVRHVHLAYRLDVNEFRG
NQSLQLLVEQIDAK

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=571, Percent_Identity=57.6182136602452, Blast_Score=663, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62799; Mature: 62799

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLTRRETVDDSHLPNHLHPLIKQLLARRGVAGDDCEQELSRLLRPETMLGLDRAACL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LADAAMASKRMLIVGDFDADGATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVA
HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
LAVEKGAEVLITVDNGISSIEGVAAAKAAGMQVVITDHHLPGQVLPDADAIVNPNQQGCT
HHHHCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
FASKSIAGVGVAFYLMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVDAGLKRVRAGRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLG
CEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
VETLLCDDIMYARRMAAELDGLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
DWHQGVIGILASRIKDKYHRPVIAFAEASDNEVKGSARSIKGLHMRDLLELISSRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCC
PKFGGHAMAAGLSLAKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCCCEEEEEEEHHH
LIRASGPWGQGFEEPLFDGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWP
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
DATVRHVHLAYRLDVNEFRGNQSLQLLVEQIDAK
CCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKLTRRETVDDSHLPNHLHPLIKQLLARRGVAGDDCEQELSRLLRPETMLGLDRAACL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
LADAAMASKRMLIVGDFDADGATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVA
HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
LAVEKGAEVLITVDNGISSIEGVAAAKAAGMQVVITDHHLPGQVLPDADAIVNPNQQGCT
HHHHCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
FASKSIAGVGVAFYLMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVDAGLKRVRAGRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLG
CEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
VETLLCDDIMYARRMAAELDGLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
DWHQGVIGILASRIKDKYHRPVIAFAEASDNEVKGSARSIKGLHMRDLLELISSRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCC
PKFGGHAMAAGLSLAKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCCCEEEEEEEHHH
LIRASGPWGQGFEEPLFDGHFRLLQQRLVGEKHLKMMVETECGRLMLDAIAFNVDLKLWP
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
DATVRHVHLAYRLDVNEFRGNQSLQLLVEQIDAK
CCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]