The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775812

Identifier: 119775812

GI number: 119775812

Start: 3209177

End: 3210439

Strand: Reverse

Name: 119775812

Synonym: Sama_2680

Alternate gene names: NA

Gene position: 3210439-3209177 (Counterclockwise)

Preceding gene: 119775818

Following gene: 119775811

Centisome position: 74.55

GC content: 58.12

Gene sequence:

>1263_bases
ATGCCGCGTTCGCCGAGCAGCCAGTATCTGGCGATAGAAAGCCTGAGTCGTTATGCCCGGGAAGAGCGTGAATCCGCTCT
GGGCATTATCCGTAATGTGCTGCAGATGTCAGACATAGCGCCGGGCCGATTCAATGCCGCCATGCAGGCTGTGGCCATGC
ATGGGCGAATTGCTTTGCACTTTCATCCGGACAGGTTTGATTCCCGGGGACTGACGGTGGCCGAAGGCCTGTTGCAGGAC
GGCCGCTATCGTTGCCAGTTTGAAACCCACATTTCGTCCGGTCTGCTTTCGCCTGAGATTGGCGGTGCCCGTGATCACTG
GGAGCGGCAATTTTTCCGTGAGCTCACCACAGATATTGCTGCCCGTCCCAAGTATGGCGCCCTCGATTTACTGCTCGCCC
CCAATGGCCCTGCGCCGCGTTTTGGCAGCTGCTATTTCCTGACCAAGCCGGAGGTGCTGTCTCGGGCAACCTTTTGTTTT
AACGATTCTTACCGCAATCCCCGTGACAAGGGCACAGCCGATGCCTTTGAGATGGTGATGGCCGCCTTGCTGACCGAAAG
TTTCGAGCGTCGTTACGCCTTGGGTGAGCATGGCCTGGCACCGGCCAAACTGGTGGAAAGGCTTGTCTCGACTCTGGGTG
AAGATATCGTGATGAGGTTTGAGCGCGGCTTGTCGGGCAACCTGGATCACTATATCGAAGCCCAGATCCACGGGCCGCTG
TCGCTTGCTGAAGACATGGAGGCACTGGTGGCCGATCCCAGTTTCAGAGGCACTGAGATTGAACCCTTGCTGCGCTCGAT
TGCAGAACGTTATCAGATAGCCCTTTATTGGCATTCAGGCCTCTGCCTGGATGTGGAGCATGTGGTGCGGGATTTTCGCG
GTGCTGGCATGCCGTCGCTGGCCCAGCGACTTGCCATCGATGGTAACGTTACGGCCTATGCCATCGGCGTTGCCGCACGG
GAAGTCAGTCGTTTCCCAACCCGCTGGCGCGCACGAGGCCACAAAACCGAGGTGCTCAGCGAACTTAAATGGTTGTGGCA
TCTGTTGGTGCGTTACGGCGCCGCGCGGGATGAGCGTGAGACATCGTTTATGCTTGATGAGTCAGCACCGCTGCAGGAAA
ATGTTCAGGCCGAGCCTGGGGGCAATGACGCTACCTGCGTCCAGGGGACATGCAAAGAAGAGGGCTTTGAGGCATCGGTA
ACCACAGAGGGGGCTCACACCGCGGACGCGGCTGCTGCCGTCAAAGACAATTCAGCGAGCTGA

Upstream 100 bases:

>100_bases
TGCTTCCCATTAAAGGCTGTTAATTTAGATGGAGAGCCAGCGGCCGCTCTGCTATCTTTGCAGTGTTTTCAACCTTTTCC
GGCCAGCCACAAGGAGCATG

Downstream 100 bases:

>100_bases
ATGCCTGCCCAAGGTGGAAAGCCATTTCCCTGCCAGTGCTTAGAAACCACCGCCAACCCGCCACATAAGAGGTTGGCTTA
ATCCAGACTTAAGCGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MPRSPSSQYLAIESLSRYAREERESALGIIRNVLQMSDIAPGRFNAAMQAVAMHGRIALHFHPDRFDSRGLTVAEGLLQD
GRYRCQFETHISSGLLSPEIGGARDHWERQFFRELTTDIAARPKYGALDLLLAPNGPAPRFGSCYFLTKPEVLSRATFCF
NDSYRNPRDKGTADAFEMVMAALLTESFERRYALGEHGLAPAKLVERLVSTLGEDIVMRFERGLSGNLDHYIEAQIHGPL
SLAEDMEALVADPSFRGTEIEPLLRSIAERYQIALYWHSGLCLDVEHVVRDFRGAGMPSLAQRLAIDGNVTAYAIGVAAR
EVSRFPTRWRARGHKTEVLSELKWLWHLLVRYGAARDERETSFMLDESAPLQENVQAEPGGNDATCVQGTCKEEGFEASV
TTEGAHTADAAAAVKDNSAS

Sequences:

>Translated_420_residues
MPRSPSSQYLAIESLSRYAREERESALGIIRNVLQMSDIAPGRFNAAMQAVAMHGRIALHFHPDRFDSRGLTVAEGLLQD
GRYRCQFETHISSGLLSPEIGGARDHWERQFFRELTTDIAARPKYGALDLLLAPNGPAPRFGSCYFLTKPEVLSRATFCF
NDSYRNPRDKGTADAFEMVMAALLTESFERRYALGEHGLAPAKLVERLVSTLGEDIVMRFERGLSGNLDHYIEAQIHGPL
SLAEDMEALVADPSFRGTEIEPLLRSIAERYQIALYWHSGLCLDVEHVVRDFRGAGMPSLAQRLAIDGNVTAYAIGVAAR
EVSRFPTRWRARGHKTEVLSELKWLWHLLVRYGAARDERETSFMLDESAPLQENVQAEPGGNDATCVQGTCKEEGFEASV
TTEGAHTADAAAAVKDNSAS
>Mature_419_residues
PRSPSSQYLAIESLSRYAREERESALGIIRNVLQMSDIAPGRFNAAMQAVAMHGRIALHFHPDRFDSRGLTVAEGLLQDG
RYRCQFETHISSGLLSPEIGGARDHWERQFFRELTTDIAARPKYGALDLLLAPNGPAPRFGSCYFLTKPEVLSRATFCFN
DSYRNPRDKGTADAFEMVMAALLTESFERRYALGEHGLAPAKLVERLVSTLGEDIVMRFERGLSGNLDHYIEAQIHGPLS
LAEDMEALVADPSFRGTEIEPLLRSIAERYQIALYWHSGLCLDVEHVVRDFRGAGMPSLAQRLAIDGNVTAYAIGVAARE
VSRFPTRWRARGHKTEVLSELKWLWHLLVRYGAARDERETSFMLDESAPLQENVQAEPGGNDATCVQGTCKEEGFEASVT
TEGAHTADAAAAVKDNSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46590; Mature: 46459

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSPSSQYLAIESLSRYAREERESALGIIRNVLQMSDIAPGRFNAAMQAVAMHGRIALH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
FHPDRFDSRGLTVAEGLLQDGRYRCQFETHISSGLLSPEIGGARDHWERQFFRELTTDIA
ECCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ARPKYGALDLLLAPNGPAPRFGSCYFLTKPEVLSRATFCFNDSYRNPRDKGTADAFEMVM
CCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHEECCCCCCCCCCCHHHHHHHHH
AALLTESFERRYALGEHGLAPAKLVERLVSTLGEDIVMRFERGLSGNLDHYIEAQIHGPL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
SLAEDMEALVADPSFRGTEIEPLLRSIAERYQIALYWHSGLCLDVEHVVRDFRGAGMPSL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHHCCCCCHHH
AQRLAIDGNVTAYAIGVAAREVSRFPTRWRARGHKTEVLSELKWLWHLLVRYGAARDERE
HHHHHCCCCCEEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
TSFMLDESAPLQENVQAEPGGNDATCVQGTCKEEGFEASVTTEGAHTADAAAAVKDNSAS
HHEEECCCCCHHHCCCCCCCCCCCCEECCCHHCCCCEEEEECCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PRSPSSQYLAIESLSRYAREERESALGIIRNVLQMSDIAPGRFNAAMQAVAMHGRIALH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
FHPDRFDSRGLTVAEGLLQDGRYRCQFETHISSGLLSPEIGGARDHWERQFFRELTTDIA
ECCCCCCCCCCHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ARPKYGALDLLLAPNGPAPRFGSCYFLTKPEVLSRATFCFNDSYRNPRDKGTADAFEMVM
CCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHEECCCCCCCCCCCHHHHHHHHH
AALLTESFERRYALGEHGLAPAKLVERLVSTLGEDIVMRFERGLSGNLDHYIEAQIHGPL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
SLAEDMEALVADPSFRGTEIEPLLRSIAERYQIALYWHSGLCLDVEHVVRDFRGAGMPSL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHHHCCCCCHHH
AQRLAIDGNVTAYAIGVAAREVSRFPTRWRARGHKTEVLSELKWLWHLLVRYGAARDERE
HHHHHCCCCCEEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
TSFMLDESAPLQENVQAEPGGNDATCVQGTCKEEGFEASVTTEGAHTADAAAAVKDNSAS
HHEEECCCCCHHHCCCCCCCCCCCCEECCCHHCCCCEEEEECCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA