Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is panE [H]
Identifier: 119775691
GI number: 119775691
Start: 3065722
End: 3066624
Strand: Direct
Name: panE [H]
Synonym: Sama_2559
Alternate gene names: 119775691
Gene position: 3065722-3066624 (Clockwise)
Preceding gene: 119775690
Following gene: 119775700
Centisome position: 71.19
GC content: 56.48
Gene sequence:
>903_bases ATGAGCCGAATTGGCATTCTGGGTGCGGGCGCCGTGGGCCAGTTAATTGCCCATCAGCTGGCGTCGGCGGGCACCTTGCC CTTTCTGCTGGACCGGCAGCTGACTGCCATTACAGAGCCTTACAGCCTCACAGACCTGAATGGCAATCGCAACACCCTGA ACTTCGCCAAATCCAACGACAAGCAAGCCCTGCTGGGGGAACTTGATCTTCTTATTATCACAGTGAAGGCCTACCAGGTA ATTGACGCAGTCACAGGCGCATTGCCCGGTTTATCACCGCACTGCCATCTGCTGTTACTGCACAATGGCCTTGGCCCCCA CGAAGAGGTGGCGGCCCTGTTGGATGGACGGGGATTGACGCTCGGCACCACCAGTCAGGGAGCGCTGCGGCTTGGCAAAC ACGACCTTAAACAAACCGGTAGTGGTCTTACGCAATTGGGCCACTGCACAGGTCCGGCCATGGCGCCAGGGCTTAAAACC TTGCTGCTGAGCGCCATTCCAGGTAGCGAGTGGGTGGAGGCAATTCTGCCCGCCCTGTGGCAAAAACTGGCGGTCAATGC CTGTATCAATCCCCTTACCGCCATTCACGGCATCTGTAATGGCGAACTGGCAGATAATGCTTACCAAGCTACTATTGCCG GGGTGCTGAGGGAGCTGGTTGAGGTCGCCAGGACTCAGGGCATTGAGTTACAGGAAGAGAGCTTGTCAGCCCGCGTGTAT GAGGTCATTCGTCTTACCGCAGCCAATCGCTCATCGATGCGACAGGATGTGGACCATAAGCGCAAAACCGAGATAGATGC TATAAATGGCTATCTGGTCAGCCTTGGCCATCGCCACAGCATTGCTACACCCACCAACAGAGCTCTGGTCGACGCCATTC ACACCCTGGAGCGACGCTTTTAA
Upstream 100 bases:
>100_bases CCTGGGGCGATATCGCAGCCGACCTCGCGGGCGTTGCCGCCTTCTTCCTCACTGCATGGCTGTATAGTAAATACCGCCGC GCATCCAGGCTTCAGGGCGC
Downstream 100 bases:
>100_bases ACCACGCACCCTCTTATTGAGGCCACATCACCATGATGGCGGCTAATGCGATAAGAACCAGCGCCGCCATGTCCTTTACC TGCACCTTTTGCTTCAGATA
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSRIGILGAGAVGQLIAHQLASAGTLPFLLDRQLTAITEPYSLTDLNGNRNTLNFAKSNDKQALLGELDLLIITVKAYQV IDAVTGALPGLSPHCHLLLLHNGLGPHEEVAALLDGRGLTLGTTSQGALRLGKHDLKQTGSGLTQLGHCTGPAMAPGLKT LLLSAIPGSEWVEAILPALWQKLAVNACINPLTAIHGICNGELADNAYQATIAGVLRELVEVARTQGIELQEESLSARVY EVIRLTAANRSSMRQDVDHKRKTEIDAINGYLVSLGHRHSIATPTNRALVDAIHTLERRF
Sequences:
>Translated_300_residues MSRIGILGAGAVGQLIAHQLASAGTLPFLLDRQLTAITEPYSLTDLNGNRNTLNFAKSNDKQALLGELDLLIITVKAYQV IDAVTGALPGLSPHCHLLLLHNGLGPHEEVAALLDGRGLTLGTTSQGALRLGKHDLKQTGSGLTQLGHCTGPAMAPGLKT LLLSAIPGSEWVEAILPALWQKLAVNACINPLTAIHGICNGELADNAYQATIAGVLRELVEVARTQGIELQEESLSARVY EVIRLTAANRSSMRQDVDHKRKTEIDAINGYLVSLGHRHSIATPTNRALVDAIHTLERRF >Mature_299_residues SRIGILGAGAVGQLIAHQLASAGTLPFLLDRQLTAITEPYSLTDLNGNRNTLNFAKSNDKQALLGELDLLIITVKAYQVI DAVTGALPGLSPHCHLLLLHNGLGPHEEVAALLDGRGLTLGTTSQGALRLGKHDLKQTGSGLTQLGHCTGPAMAPGLKTL LLSAIPGSEWVEAILPALWQKLAVNACINPLTAIHGICNGELADNAYQATIAGVLRELVEVARTQGIELQEESLSARVYE VIRLTAANRSSMRQDVDHKRKTEIDAINGYLVSLGHRHSIATPTNRALVDAIHTLERRF
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=307, Percent_Identity=34.2019543973941, Blast_Score=134, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 32014; Mature: 31883
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIGILGAGAVGQLIAHQLASAGTLPFLLDRQLTAITEPYSLTDLNGNRNTLNFAKSND CCCCCEECCCHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCEEEECCCCCCEEEECCCCC KQALLGELDLLIITVKAYQVIDAVTGALPGLSPHCHLLLLHNGLGPHEEVAALLDGRGLT CHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCE LGTTSQGALRLGKHDLKQTGSGLTQLGHCTGPAMAPGLKTLLLSAIPGSEWVEAILPALW ECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QKLAVNACINPLTAIHGICNGELADNAYQATIAGVLRELVEVARTQGIELQEESLSARVY HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH EVIRLTAANRSSMRQDVDHKRKTEIDAINGYLVSLGHRHSIATPTNRALVDAIHTLERRF HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SRIGILGAGAVGQLIAHQLASAGTLPFLLDRQLTAITEPYSLTDLNGNRNTLNFAKSND CCCCEECCCHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCEEEECCCCCCEEEECCCCC KQALLGELDLLIITVKAYQVIDAVTGALPGLSPHCHLLLLHNGLGPHEEVAALLDGRGLT CHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCE LGTTSQGALRLGKHDLKQTGSGLTQLGHCTGPAMAPGLKTLLLSAIPGSEWVEAILPALW ECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QKLAVNACINPLTAIHGICNGELADNAYQATIAGVLRELVEVARTQGIELQEESLSARVY HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH EVIRLTAANRSSMRQDVDHKRKTEIDAINGYLVSLGHRHSIATPTNRALVDAIHTLERRF HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]